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LotjaGi6g1v0288200.1

Overview

Field Value
Gene ID LotjaGi6g1v0288200
Transcript ID LotjaGi6g1v0288200.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Protein kinase; TAIR: AT1G62400.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q2MHE4|HT1_ARATH Serine/threonine-protein kinase HT1; TrEMBL-Plants: tr|V7C735|V7C735_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0288200
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:60529710..60534422) extracted from Lotus japonicus Gifu genome v1.2.

TGCCACCTGTATTCTAAGACTTTGTTGTGTCCCACACAACAAGGATGGGATATATCCAAAGTGTGGGAAAAGACTGCATG CAAATCAAAGTGCAAATTGTTGGATGAGCCAATCGCATATCTCAACTCACCTCACTTTGCACTGAGACCACTTAGCAATA TTGCATTCATGATAATGCAGGAAAAGAAAAGAAGCTGAATCAAATCAACCAAAAAGCTCTCTCTTTCTCTCTCTCACTAT AATAATTACTTCACTTTTGAACCAAGCACACTCACGAGACACCCTTGAATCAAAGCTTCTCCTTCCATTTCATCTTTTTG CTGCTAAACAACCTAATCTTCTTGTTAAAAGCCGTGAAAACTGCAACTTCTTCTTCTTATTCTTCTCTCTTTCACACTAT TTCATTTCTGTCATCTTTTTTCTTGCATTTGTCTCCATTTCCTTAAGCAATGAAATCCCTTGTTTCTGCTAACTCCCCTG TAGTTCCTTGCAATCTGTAGTAAGATTTTCCATTCATCCAAACTTTGAATGAAACAACAAAGTAATCATTTCTTGACAAG AAAAACAGTGGTCTGGTTTTACAACATGACCTTCATAGGGTCTTCTTCTTCATTGGATATGAAAACTTATCAACTCGGTT GTTTCATGAAAACTCAGAACAATTTTCAATGGCGGAAAATTCCTTTTGATACTCTATTTTGACAAGCATCACACAAGTTT CACAGACAGAACCAGTTTATCAATGGCGGGTTCATGTTTCTACGGGCTTCGCCTGAGGAGATCAAAGAGCAAACCATTAC AAGACCCTTCATCTTCATCAAGGAACCGGTTGAATCCCGACATGGAGAACATGGAAAGGAGGAGATTTGACAGCATGGAA TCATGGTCCATGATATTGGACTCTGAGAATTTGGATACATGGGAGACTTCAAAAGAGGACCAGGAAGAATGGACTGCAGA TTTATCACAGCTTTTCATTGGTAACAAGTTTGCTTCCGGTGCTCACAGCAGGATTTACCGTGGAATCTACAAGCAGAGAG CGGTTGCTGTGAAAATGGTGAGGATTCCAAATCAGAATGAGGAGAGAAGAGTGTTGCTGGAGCAACAGTTCAAGTCTGAA GTGGCTTTGCTTTCTCGTCTGGTTCATCGTAATATAGTGCAGGTAAGGTGTTAGTTTATTGTTGTGCTCATTAATTCTTC TTGTCTGCTTGGTGGTTACTAGTTTTTGTTTGTTTGTTCTTGCTTGTTGTTTTCTGTGTGGTGGGTCTGGAACATGGAAT TGAAGGTAAGCAAGAGCTAAGTTCATGACAACTCAAGTGAAAAATAAAAATAGCCATGTTGTTTATTGCAGAAAAATTGT TATGAAGCTAAATACACAAAGTGAAAATGTATAACAAAATAATGTATGATAAGGTCCATGTAAAAATTGTTTTTTGGGAG GTATTGTATATGCCACTTTCATTCTATCAACAAATCATTTTCATTCAGACAATTGGTATGAATGAGAGGGCATTTTCCAA AATATATTTCATGAAGTCTAAGAGGGGGTGAGGTGGGGGGACAAAGAGGGGCTCCTACAATCTAAAGCAACATAAACTAG TAAATGTTTAGAAATCCTTCTACGATTGATTCTAAAGACAAAATCAGTTCTGGAGAGAAGCTTTTGTGAGTAGTTTCGAG CTGCTAGAATTGATTCTGATGAAAAGTAAGCTGATTGAAACATGCTAATTTAGTTTCTTGTTTAGATTTTACAAACCAAT TTAGATTCCAAAATCAAATCTAATAAGAAGTTACTAAGTGTGACTTTTGCTGTCAGAAATCAAGTTTTCTGTCATTCTGC CATATTTTGAAGGTGCAACATGAGTAATACAATATTTATCTTTGTGCTTGGCTTTTTGCTGGTAAAACCATGAGGTATCC CTATACCTTTTTTTGTACAAGACTGTTGATTTAGCCCTGGCCAGAAAGTATTCTCTTGAGTTTTGAATCCCTTAGGTAAA GTTGGCCCAGACAGAGTTACTTTGACTAGTGGTTGTCTATGGTCTTTGGGTTTTAATACATTCTCAACCACAAATTTATT AGCCATAGCTACATCACTATCAGGAAAGCCTAACATTTATGTGTGGTCATTGTAGTATTTAATTATTTATCTGCAGGGGT GTTAATTTCTAATGCCATTTATTAATGAGTGTATAAGGTCTGATATTTAAATGACTCTTAATTTACAGTTTATTGCAGCA TGTAAAAAACCGCCAGTGTACTGTATCATAACTGAATACATGTCACAAGGAACGCTGAGAATGTATCTGAACAAGAAAGA GCCATACTCCCTTTCAATAGAAACAGTACTGAGGTTAGCTCTTGACATATCTAGGGGAATGGAGTACCTTCATTCACAAG GTGTGATTCACAGAGACCTCAAGTCAAATAACTTGCTTCTCAATGATGAAATGAGGGTTAAGGTAGCAGATTTTGGCACA TCATGTCTTGAAACAAGATGCAGGGAAACCAAAGGAAACATGGGAACATATCGTTGGATGGCGCCAGAGATGATTAAGGG AAAACCTTATACTCGTAAAGTCGATGTGTATAGCTTTGGTATTGTGCTTTGGGAGCTCACAACTGCTCTACTTCCCTTTC AAGGAATGACACCAGTGCAAGCTGCTTTTGCTGTGTCTGAGAAGGTTAGTTGGCAATGTCTAAACCTCTTGAATGATGTC TTCTTCACATTAAAATGCTTTCAGATAGAGGTGAGAAGGACAAAAATATTGTGACTGCTAGTAGTTCTTTTCAAGATAAC CTCTTCGTCACAATCCTTCTTCTGAGAAAACAAAATACTTAACACAGGCTACAAAGGAGCATGAAATGAGTGTTGCTAGT GTTGATCATGGATTGAAATCATATATCCTCATAAAGTGTTTCGATCCTTATTCCAGCAATCAAATTGTGACGTATTATTT AAAAATCAATCATGTAACGTAAGCTTATAACTCTCATGCTCACTCTTACATGACACAATTTGATTGGTGGGACTTGGGGA TAAGACAGCAACTGGGATAGAAGATCTGCATCAATTGATTATATGCATAAATCGTTATCAAAAGGCAATATGAACAGAAC ATAATTTATTAATGACTCTGCTTGATCATGTTGCATATTGTTAGAAGTCCCACATTGGCTAGAGATAAGGCCAATCAAGT GTTTATAAGGGTTGTGCAAACCTCAACTCTTGAGCTAGCTTTTGTGGTTGAGTATAGGCCTCCCAATTTCTAATATGGTA TTAGAGCCTATCCTAGATCCATTTGTTGTGTGGAGACCTCCCATATTTGGGCCACCCGTTGTTGTTCCCACGTTCCAGTC TGTTCAATCCTGGACGTGAGGGGGTGTGTTAGAAGTCCCAAATATGGGAGGTCTCCACACAACAAATGGATCTAGAATAT GGGAGGTCTCCACACAACAAATGGATCTAGGATAGGCTCTGATACCATATTAGAAATTGGGGGGCCTATACTCAACCACA AAAGCTAGCTCAAGAGTGGAGGTTTGCACAACCCTTATAAACACTTGATTGGCCTTATCTCTAGCCAATGTGGAACTTCT AACACATATCTCTAGTTGCTATTACAATCAGGCCTTTAGTAGTTAAAAACTTGCAGCATGGCAACATTCCCCGGAATCTA GTCATGGTTATCTTGAACTACTTGATCTTTGTTACTTTGTAAACTAGGTAAAAAAGGATTATATGTGCATGACCAAGCTT GAGCGGTAGTACTAGAAAAATGATTTGTAGACATTCTCATAGTGCAGACATCTAACATACTAATCTCAGAACAAGGATTA TTTTATTTAGGAGTAGTCTTTTTATACAGAGTATTTTATGGTATGTCCCCCCATAACATAGTGATTATTTTTTGTTTAAT AGTGTAGGAGTCTGTATGTTTCTTCTTGCCTTGTTTTGATCACTGTCTTCTAGTCCCAATAATGGGAAGCACTGGTGCAT GGGCCGTGAAAGTGTTCCCTCCCTAGTCCCAACAAGCACTCACTAATATGGCCCAATCAATTATAAAATGTTTAGGTGCA TGAATCTGTCAAAAAAGTAGTCATTGGAATAAGGTCTTGCCTCGTACAGACAGAAACAAGTTCCCCCAAAGAAAAACTCA TTGGATTTCTCTTCTTTTTTGTTTTCATTAGCCCCAATTTCTTATGTTATGGGAAATGTTATGGGTCCCTCACTATATTG TAATCTTAAGCATAATGGTATTATGATAATGTTGAATTTGATTTGGTAACACATTTTTATGATTTTGATGATCAGAATGA GAGGCCTCCACTGCCAGCTAGTTGTCAACCCGCACTAGCACATCTGATAAAGCGATGCTGGGCAGTAAATCCCTCAAAGA GGCCAGATTTCAGTGAGATAGTGAGTTCATTGGAGAAGTACGACGAGTGTGTGAAGGAAGGGCTACCTTTAACTCATCAT TCAGTGTTAGTCACCAAAAATGTAATTATTCAACGTCTTAAAGGCTGTGTATCCATCACCTCCTCCATACCTGTACCTGC TTAATTCATTCATTCCCCCATCCTCTAAGCTATATAGTTGTCCTTATCTCCCATCCCATGTGTCTGTATATATATACATA TACTCCATCATACTTTATACAAGCTTAATGATATCTTTCAATTGTAATATGTAACTACTAATTTCAAGTTTGG
Download Genomic Sequence

CDS sequence (LotjaGi6g1v0288200.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCGGGTTCATGTTTCTACGGGCTTCGCCTGAGGAGATCAAAGAGCAAACCATTACAAGACCCTTCATCTTCATCAAG GAACCGGTTGAATCCCGACATGGAGAACATGGAAAGGAGGAGATTTGACAGCATGGAATCATGGTCCATGATATTGGACT CTGAGAATTTGGATACATGGGAGACTTCAAAAGAGGACCAGGAAGAATGGACTGCAGATTTATCACAGCTTTTCATTGGT AACAAGTTTGCTTCCGGTGCTCACAGCAGGATTTACCGTGGAATCTACAAGCAGAGAGCGGTTGCTGTGAAAATGGTGAG GATTCCAAATCAGAATGAGGAGAGAAGAGTGTTGCTGGAGCAACAGTTCAAGTCTGAAGTGGCTTTGCTTTCTCGTCTGG TTCATCGTAATATAGTGCAGTTTATTGCAGCATGTAAAAAACCGCCAGTGTACTGTATCATAACTGAATACATGTCACAA GGAACGCTGAGAATGTATCTGAACAAGAAAGAGCCATACTCCCTTTCAATAGAAACAGTACTGAGGTTAGCTCTTGACAT ATCTAGGGGAATGGAGTACCTTCATTCACAAGGTGTGATTCACAGAGACCTCAAGTCAAATAACTTGCTTCTCAATGATG AAATGAGGGTTAAGGTAGCAGATTTTGGCACATCATGTCTTGAAACAAGATGCAGGGAAACCAAAGGAAACATGGGAACA TATCGTTGGATGGCGCCAGAGATGATTAAGGGAAAACCTTATACTCGTAAAGTCGATGTGTATAGCTTTGGTATTGTGCT TTGGGAGCTCACAACTGCTCTACTTCCCTTTCAAGGAATGACACCAGTGCAAGCTGCTTTTGCTGTGTCTGAGAAGAATG AGAGGCCTCCACTGCCAGCTAGTTGTCAACCCGCACTAGCACATCTGATAAAGCGATGCTGGGCAGTAAATCCCTCAAAG AGGCCAGATTTCAGTGAGATAGTGAGTTCATTGGAGAAGTACGACGAGTGTGTGAAGGAAGGGCTACCTTTAACTCATCA TTCAGTGTTAGTCACCAAAAATGTAATTATTCAACGTCTTAAAGGCTGTGTATCCATCACCTCCTCCATACCTGTACCTG CTTAA
Download CDS Sequence

Protein sequence (LotjaGi6g1v0288200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MAGSCFYGLRLRRSKSKPLQDPSSSSRNRLNPDMENMERRRFDSMESWSMILDSENLDTWETSKEDQEEWTADLSQLFIG NKFASGAHSRIYRGIYKQRAVAVKMVRIPNQNEERRVLLEQQFKSEVALLSRLVHRNIVQFIAACKKPPVYCIITEYMSQ GTLRMYLNKKEPYSLSIETVLRLALDISRGMEYLHSQGVIHRDLKSNNLLLNDEMRVKVADFGTSCLETRCRETKGNMGT YRWMAPEMIKGKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVSEKNERPPLPASCQPALAHLIKRCWAVNPSK RPDFSEIVSSLEKYDECVKEGLPLTHHSVLVTKNVIIQRLKGCVSITSSIPVPA
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR44329:SF76
4 349 346 2.8E-204
IPR015783
PANTHER
PTHR44329
4 349 346 2.8E-204 –
MobiDBLite
mobidb-lite
14 36 23 - –
SUPERFAMILY
SSF56112
54 331 278 9.59E-82
IPR011009
Gene3D
G3DSA:3.30.200.20
66 159 94 2.1E-23 –
ProSiteProfiles
PS50011
77 350 274 42.478
IPR000719
SMART
SM00220
77 338 262 1.0E-64
IPR000719
Pfam
PF07714
79 331 253 2.5E-66
IPR001245
CDD
cd13999
84 331 248 1.83471E-129 –
PRINTS
PR00109
155 168 14 6.3E-19
IPR001245
Gene3D
G3DSA:1.10.510.10
160 355 196 1.2E-62 –
PRINTS
PR00109
193 211 19 6.3E-19
IPR001245
ProSitePatterns
PS00108
199 211 13 -
IPR008271
PRINTS
PR00109
239 249 11 6.3E-19
IPR001245
PRINTS
PR00109
258 280 23 6.3E-19
IPR001245
PRINTS
PR00109
302 324 23 6.3E-19
IPR001245

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0004674
Molecular function Protein serine/threonine kinase activity Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of
GO:0071244
Biological process Cellular response to carbon dioxide Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a carbon dioxide (CO2) stimulus.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0288200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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