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Field | Value |
---|---|
Gene ID | LotjaGi6g1v0288200 |
Transcript ID | LotjaGi6g1v0288200.2 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Protein kinase; TAIR: AT1G62400.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q2MHE4|HT1_ARATH Serine/threonine-protein kinase HT1; TrEMBL-Plants: tr|V7C735|V7C735_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0288200 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:60529859..60533710) extracted from Lotus japonicus Gifu genome v1.2.
ACAAGTTTCACAGACAGAACCAGTTTATCAATGGCGGGTTCATGTTTCTACGGGCTTCGCCTGAGGAGATCAAAGAGCAA ACCATTACAAGACCCTTCATCTTCATCAAGGAACCGGTTGAATCCCGACATGGAGAACATGGAAAGGAGGAGATTTGACA GCATGGAATCATGGTCCATGATATTGGACTCTGAGAATTTGGATACATGGGAGACTTCAAAAGAGGACCAGGAAGAATGG ACTGCAGATTTATCACAGCTTTTCATTGGTAACAAGTTTGCTTCCGGTGCTCACAGCAGGATTTACCGTGGAATCTACAA GCAGAGAGCGGTTGCTGTGAAAATGGTGAGGATTCCAAATCAGAATGAGGAGAGAAGAGTGTTGCTGGAGCAACAGTTCA AGTCTGAAGTGGCTTTGCTTTCTCGTCTGGTTCATCGTAATATAGTGCAGGTAAGGTGTTAGTTTATTGTTGTGCTCATT AATTCTTCTTGTCTGCTTGGTGGTTACTAGTTTTTGTTTGTTTGTTCTTGCTTGTTGTTTTCTGTGTGGTGGGTCTGGAA CATGGAATTGAAGGTAAGCAAGAGCTAAGTTCATGACAACTCAAGTGAAAAATAAAAATAGCCATGTTGTTTATTGCAGA AAAATTGTTATGAAGCTAAATACACAAAGTGAAAATGTATAACAAAATAATGTATGATAAGGTCCATGTAAAAATTGTTT TTTGGGAGGTATTGTATATGCCACTTTCATTCTATCAACAAATCATTTTCATTCAGACAATTGGTATGAATGAGAGGGCA TTTTCCAAAATATATTTCATGAAGTCTAAGAGGGGGTGAGGTGGGGGGACAAAGAGGGGCTCCTACAATCTAAAGCAACA TAAACTAGTAAATGTTTAGAAATCCTTCTACGATTGATTCTAAAGACAAAATCAGTTCTGGAGAGAAGCTTTTGTGAGTA GTTTCGAGCTGCTAGAATTGATTCTGATGAAAAGTAAGCTGATTGAAACATGCTAATTTAGTTTCTTGTTTAGATTTTAC AAACCAATTTAGATTCCAAAATCAAATCTAATAAGAAGTTACTAAGTGTGACTTTTGCTGTCAGAAATCAAGTTTTCTGT CATTCTGCCATATTTTGAAGGTGCAACATGAGTAATACAATATTTATCTTTGTGCTTGGCTTTTTGCTGGTAAAACCATG AGGTATCCCTATACCTTTTTTTGTACAAGACTGTTGATTTAGCCCTGGCCAGAAAGTATTCTCTTGAGTTTTGAATCCCT TAGGTAAAGTTGGCCCAGACAGAGTTACTTTGACTAGTGGTTGTCTATGGTCTTTGGGTTTTAATACATTCTCAACCACA AATTTATTAGCCATAGCTACATCACTATCAGGAAAGCCTAACATTTATGTGTGGTCATTGTAGTATTTAATTATTTATCT GCAGGGGTGTTAATTTCTAATGCCATTTATTAATGAGTGTATAAGGTCTGATATTTAAATGACTCTTAATTTACAGTTTA TTGCAGCATGTAAAAAACCGCCAGTGTACTGTATCATAACTGAATACATGTCACAAGGAACGCTGAGAATGTATCTGAAC AAGAAAGAGCCATACTCCCTTTCAATAGAAACAGTACTGAGGTTAGCTCTTGACATATCTAGGGGAATGGAGTACCTTCA TTCACAAGGTGTGATTCACAGAGACCTCAAGTCAAATAACTTGCTTCTCAATGATGAAATGAGGGTTAAGGTAGCAGATT TTGGCACATCATGTCTTGAAACAAGATGCAGGGAAACCAAAGGAAACATGGGAACATATCGTTGGATGGCGCCAGAGATG ATTAAGGGAAAACCTTATACTCGTAAAGTCGATGTGTATAGCTTTGGTATTGTGCTTTGGGAGCTCACAACTGCTCTACT TCCCTTTCAAGGAATGACACCAGTGCAAGCTGCTTTTGCTGTGTCTGAGAAGGTTAGTTGGCAATGTCTAAACCTCTTGA ATGATGTCTTCTTCACATTAAAATGCTTTCAGATAGAGGTGAGAAGGACAAAAATATTGTGACTGCTAGTAGTTCTTTTC AAGATAACCTCTTCGTCACAATCCTTCTTCTGAGAAAACAAAATACTTAACACAGGCTACAAAGGAGCATGAAATGAGTG TTGCTAGTGTTGATCATGGATTGAAATCATATATCCTCATAAAGTGTTTCGATCCTTATTCCAGCAATCAAATTGTGACG TATTATTTAAAAATCAATCATGTAACGTAAGCTTATAACTCTCATGCTCACTCTTACATGACACAATTTGATTGGTGGGA CTTGGGGATAAGACAGCAACTGGGATAGAAGATCTGCATCAATTGATTATATGCATAAATCGTTATCAAAAGGCAATATG AACAGAACATAATTTATTAATGACTCTGCTTGATCATGTTGCATATTGTTAGAAGTCCCACATTGGCTAGAGATAAGGCC AATCAAGTGTTTATAAGGGTTGTGCAAACCTCAACTCTTGAGCTAGCTTTTGTGGTTGAGTATAGGCCTCCCAATTTCTA ATATGGTATTAGAGCCTATCCTAGATCCATTTGTTGTGTGGAGACCTCCCATATTTGGGCCACCCGTTGTTGTTCCCACG TTCCAGTCTGTTCAATCCTGGACGTGAGGGGGTGTGTTAGAAGTCCCAAATATGGGAGGTCTCCACACAACAAATGGATC TAGAATATGGGAGGTCTCCACACAACAAATGGATCTAGGATAGGCTCTGATACCATATTAGAAATTGGGGGGCCTATACT CAACCACAAAAGCTAGCTCAAGAGTGGAGGTTTGCACAACCCTTATAAACACTTGATTGGCCTTATCTCTAGCCAATGTG GAACTTCTAACACATATCTCTAGTTGCTATTACAATCAGGCCTTTAGTAGTTAAAAACTTGCAGCATGGCAACATTCCCC GGAATCTAGTCATGGTTATCTTGAACTACTTGATCTTTGTTACTTTGTAAACTAGGTAAAAAAGGATTATATGTGCATGA CCAAGCTTGAGCGGTAGTACTAGAAAAATGATTTGTAGACATTCTCATAGTGCAGACATCTAACATACTAATCTCAGAAC AAGGATTATTTTATTTAGGAGTAGTCTTTTTATACAGAGTATTTTATGGTATGTCCCCCCATAACATAGTGATTATTTTT TGTTTAATAGTGTAGGAGTCTGTATGTTTCTTCTTGCCTTGTTTTGATCACTGTCTTCTAGTCCCAATAATGGGAAGCAC TGGTGCATGGGCCGTGAAAGTGTTCCCTCCCTAGTCCCAACAAGCACTCACTAATATGGCCCAATCAATTATAAAATGTT TAGGTGCATGAATCTGTCAAAAAAGTAGTCATTGGAATAAGGTCTTGCCTCGTACAGACAGAAACAAGTTCCCCCAAAGA AAAACTCATTGGATTTCTCTTCTTTTTTGTTTTCATTAGCCCCAATTTCTTATGTTATGGGAAATGTTATGGGTCCCTCA CTATATTGTAATCTTAAGCATAATGGTATTATGATAATGTTGAATTTGATTTGGTAACACATTTTTATGATTTTGATGAT CAGAATGAGAGGCCTCCACTGCCAGCTAGTTGTCAACCCGCACTAGCACATCTGATAAAGCGATGCTGGGCAGTAAATCC CTCAAAGAGGCCAGATTTCAGTGAGATAGTGAGTTCATTGGAGAAGTACGACGAGTGTGTGAAGGAAGGGCTACCTTTAA CTCATCATTCAGTGTTAGTCACCAAAAATGTAATTATTCAACGTCTTAAAGGCTGTGTATCCATCACCTCCTCCATACCT GTACCTGCTTAA
CDS sequence (LotjaGi6g1v0288200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGGTTCATGTTTCTACGGGCTTCGCCTGAGGAGATCAAAGAGCAAACCATTACAAGACCCTTCATCTTCATCAAG GAACCGGTTGAATCCCGACATGGAGAACATGGAAAGGAGGAGATTTGACAGCATGGAATCATGGTCCATGATATTGGACT CTGAGAATTTGGATACATGGGAGACTTCAAAAGAGGACCAGGAAGAATGGACTGCAGATTTATCACAGCTTTTCATTGGT AACAAGTTTGCTTCCGGTGCTCACAGCAGGATTTACCGTGGAATCTACAAGCAGAGAGCGGTTGCTGTGAAAATGGTGAG GATTCCAAATCAGAATGAGGAGAGAAGAGTGTTGCTGGAGCAACAGTTCAAGTCTGAAGTGGCTTTGCTTTCTCGTCTGG TTCATCGTAATATAGTGCAGTTTATTGCAGCATGTAAAAAACCGCCAGTGTACTGTATCATAACTGAATACATGTCACAA GGAACGCTGAGAATGTATCTGAACAAGAAAGAGCCATACTCCCTTTCAATAGAAACAGTACTGAGGTTAGCTCTTGACAT ATCTAGGGGAATGGAGTACCTTCATTCACAAGGTGTGATTCACAGAGACCTCAAGTCAAATAACTTGCTTCTCAATGATG AAATGAGGGTTAAGGTAGCAGATTTTGGCACATCATGTCTTGAAACAAGATGCAGGGAAACCAAAGGAAACATGGGAACA TATCGTTGGATGGCGCCAGAGATGATTAAGGGAAAACCTTATACTCGTAAAGTCGATGTGTATAGCTTTGGTATTGTGCT TTGGGAGCTCACAACTGCTCTACTTCCCTTTCAAGGAATGACACCAGTGCAAGCTGCTTTTGCTGTGTCTGAGAAGATGT TGAATTTGATTTGGTAA
Protein sequence (LotjaGi6g1v0288200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAGSCFYGLRLRRSKSKPLQDPSSSSRNRLNPDMENMERRRFDSMESWSMILDSENLDTWETSKEDQEEWTADLSQLFIG NKFASGAHSRIYRGIYKQRAVAVKMVRIPNQNEERRVLLEQQFKSEVALLSRLVHRNIVQFIAACKKPPVYCIITEYMSQ GTLRMYLNKKEPYSLSIETVLRLALDISRGMEYLHSQGVIHRDLKSNNLLLNDEMRVKVADFGTSCLETRCRETKGNMGT YRWMAPEMIKGKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVSEKMLNLIW
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 4 | 293 | 290 | 1.8E-175 | ||
PANTHER | 4 | 293 | 290 | 1.8E-175 | – | |
MobiDBLite | 14 | 36 | 23 | - | – | |
SUPERFAMILY | 54 | 293 | 240 | 3.64E-69 | ||
Gene3D | 66 | 159 | 94 | 1.3E-23 | – | |
ProSiteProfiles | 77 | 298 | 222 | 39.142 | ||
SMART | 77 | 294 | 218 | 3.1E-42 | ||
Pfam | 79 | 290 | 212 | 1.4E-53 | ||
CDD | 84 | 294 | 211 | 1.56558E-105 | – | |
PRINTS | 155 | 168 | 14 | 1.5E-12 | ||
Gene3D | 160 | 297 | 138 | 1.6E-45 | – | |
PRINTS | 193 | 211 | 19 | 1.5E-12 | ||
ProSitePatterns | 199 | 211 | 13 | - | ||
PRINTS | 239 | 249 | 11 | 1.5E-12 | ||
PRINTS | 258 | 280 | 23 | 1.5E-12 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | Protein serine/threonine kinase activity | Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. | ||
Biological process | Cellular response to carbon dioxide | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a carbon dioxide (CO2) stimulus. |
Expression pattern of LotjaGi6g1v0288200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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