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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0300300 |
| Transcript ID | LotjaGi6g1v0300300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Guanylate kinase; TAIR: AT3G06200.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q10M74|GMK2_ORYSJ Guanylate kinase 2, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A0L9VEL3|A0A0L9VEL3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0300300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:61799292..61803290) extracted from Lotus japonicus Gifu genome v1.2.
ATTATGTGTATGTTTAGATTTTGGTTAAACTCAACTTAAATTCATATTAAAAACAACATGTTGAAATCCTACTTCTCCCC CATCTATGATGTTGGATTAATATTTCAAAACAAACATGATGACTTGAAACAAAACAAAACCTAGTACTATATATATTTAC TGTGTATTTTTTTACCAACCCTCATCTTCTTCTTCTTCCTCTACACAACACACTGTATTCATTCTTCGCTTCCTCTCCTC TGCTCCATGTTTCGCAGGCTCCTCTATTCCTCTGCCCCTCATCTTCCAATCCCACCAAAACCAACCAACCTCTACTCCTT CTCCCTCCCCATTCTCAACTCCACCACCCACAACCGCTCCTTCCACACCACCGCCAAACTCCTCTCCTCAATGGGCGACG CCCGGAGACCATTATCAGTCCCCATCCCGACCGTCGACAAAGCCGACCGCTCCGAGCTCCTCCGCGCTCTCGAAGCCTCC CTCGGCTCCTCCTTCAGCTCGGAGCCTTTCTCTCCCAACCCCAACCCTCTTGTCATCGTCATCAGCGGCCCCAGCGGCGT CGGCAAAGACGCCGTCATTTCCCGCCTCCGTGACGCCCGCCGTGGCCTCCACTTCGTCGTCACCGCCACCAGCCGCGCTA AACGCCCCGGCGAGGTTGATGGGCAGGACTACTTCTTCGTCTCCAAGGAGGAGTTTCTGGGGATGGTGGAGAAGGACGAG CTTCTGGAGTACGCGCTGGTGTATGGTGACTACAAAGGGGTGCCGAAGCAGCAGATCCGGGAGTACATGGCAAAGGGGTG TGATGTGGTTCTGAGGGTGGATATTCAGGGTGCTCACACGCTGAGGAAGGTGCTGGGGAAGTCGGCGGTGTTTGTGTTTT TGGTGGCGGAGAGTGAGATGGCGATGGTGGAGAGGCTGGTGGAGAGGAACACGGAGACGGCGGAGTCGTTGCTGGTGAGG ATTAGCACGGCGAGGGAGGAGATGAAGCATGTGAAGAATTTTGATTATGTGGTGGTGAATGCCAAGGGGAAGCTTGAGAA TGCTGTGAAGTTGGTGGACTCTATCATTGATGCTGAGAAAGCTAAGGTCCGTCAAAGGACGCTTGTTTTATAGTCTGCAT CAGTTTTTCTTCAATCTTCTTGGTAATTCCCTTTTTCTTGGAACTTCATTTTTTCTGTTTCATGATTCTAATTTGTGTTG TGTGTGTCCTTCAATTGATAATTTGATATAAGGTTTTGTTACATGCCTTCTATGTGTGTGTTTTGCAATGATGATTGTAT GAATTTGATTAATTGTTGAGGTTAGATTTATCTGATGGCAGTTCTTCATTCTCTTTCTGAATGCTAGATGCAATATGCAT TCTTTGAGAAACAAATTTGGAGTGAAACTGAAATGTCCATTGCATCATGCTGACTTTGGATTTTACATGTGAATATTGAT TGAAAGATGCAGTTTTTGTTCATAAATGAAGTTTTGTTAGATTGGCATGCTAGGTTGAATGGACTTGCTTCTACTCGGAC CTTGCCTGATTGTGAAACTGCTAAGGCATAAGCTTTAGCATCCTGTTTTATAAGACCTTGATTTCTGTTTAAATGTTGCT CTTCAACAGCTTAAGCATAAGAGTAGTTATTTATTTCTTATATATATTAGGCCCCTCATTTCACTACAATTCTCTCCCTT CAAAAAGAATAGCCCTCCTACCTCTTTCTGTTCTGCAAGACCTCCGTTTTTATATTTTTATACCCACATGAATATTCTAA GTATGAGAGGAAATATCTTCTTCCTGAAAAATAAGCCCCTTCTCTCTGAATTTCAATTAAAGAATGGGGCAGCCCTATAT GTACTTGAGCTATGGAGCCCAGATATTTCGAAATTGCTCAAATATCAGTGTCATATATGCAGATGCGTAGGATATTCCCA GTCATGTGTCTAGGAAGTATCCAATTGTTATATACACAGCTTGACATGTTTGCATTACAATTCCAAATACTTGAAGTTTC TTATGCAACTTTTCTCTTCATCATATTGTGAGAGTAATTGGATTACACTGTTGAAATTATGTCTCAGTACCTGTTTGAAT TTTAAATTTAAGTTGTTAGTTTGAAGTTGTTATTTAAATTTGAATAAGTCCTAATTCTGTTAGGATGATTAGTTAGACTA TCTTTGAATTTGTTTAGAGTATCTTCTGTTAGTATTTCAAATTTTGCAGATTTCTAGTCAGTTTGTTAGTTACTCTTTGC CTTTAAAAGAGCAAGTTCTGATTAATAAAAAATCTGCCTTCCATCAGAAATATTTTCTTCTCTTTCACGTTAAAAAAACC AACATTCACATACTCCTTTATTCATTCGACAAAGAGAAACAAAATGATTCAAAAAAGGGTAGAGGTTTCCTTTATGTACA CTCCAACCTTTTACTTTTTTATAGAAAAGATAAAGGGTATGCTAAAGGAAGATATAAGGTTGGGGCCTGGGGGACATCAG TGAACATGTACATGATCTACTTGATAATGGTGGTGGATCTCTTCAATTTGTTAGAGCTGTATTATGCATTTATTTTAAGT ATATAGATTTCTCAGATCTCTTTATCCATGTTGCATATAAACCTATGTCTTATTAAATAGCTAGACTTAATAGTTCTTGA GCAATATTGGCTCATTACAATGCTTTGACAGGCTTAGATTGAAATTGTGGGGCTACTACATTCGAACATGCACTAAAATT GGAGTACTATAAGTTGCAAATAGTTTGATTTGAGAAGGCCACTTCATTAGATATTAGAAATACATTTTGCACGGTAAAAC TTTAGGATTGTGAGTTTAAAGTTTGTGATTGTCTCGGTTGGAGTTTAAGATACATTTTATCATGCAAGTGCATGTTATAC ATGGTTGAGTTTATATTTGCTGGATATGTATGTTTGGTAGTAAATAACTAAATATTTATTTTATGAATAAGACATAACTG TTCCTTACATTTTGATTACATGAATTCATAACAAATGTGATAAATTAGATATGCTATGTGGCAGTTTGTTGTAGCTCCAT GTTTTATTTAGGACTTGCTCCAACATTTATCATTAGCATTTCATGATTACTATTTATTAATTTTTTTCTTGGCCAACAGA AGTGACTAGGTGCCTTCAAGCTTGCTTGCTTTGCAACCTGCACGTACTAACTGTTTGTATTATTAATATTGCTTTTTCTT GTAGATTTTATGACAGCTAATTAGCTGGGGATGCTAGTATAACTCCATTCTGAAGGCTCTGTGTTTTGCCAATTACAAAC TTGGTACTTCCGTTGTTCCTTTCATACAATTGGTATCATCATGCGCATACTGTTAATGTCTGTGGTGATTCTTCCAGTAC TCATGCTGCTACAACATTGAAGTTTTTACTAGGTTGATAGAAGTTTTAATTGCAACTTGTAAGTTGTTATACAATTTGTT AAATTTATTTGTTAATCTGGTAGGAAATATTTATGTAGGTAGCATATTGAATTTAGTGAGTGAAACTGAAAAGTGAAAAC AGTGAACTGAACTGTGACACAGAAAGCCTTTATAGTTTATACCTCATGTTATTCTTCTAGTGAGCTGATTCAAAAAGCAT TTAGCTTTAAACCTAATTGCAATAGGTTTTTATTCGTGTTCTGAGTCCTTCTTTCTCTCTATTTTACTTAGGGTTAAAAT GTGATATATAGGTATGCTTAATAAGAATATGGAAGAGATAGAAATGAATTAATTTTTGTTTCTGTGGATAATTAGATGGC TACAAATTATTTCCATCTTGGTGTGTTAATAACCCCCGGGTCCTACTAGACCTAGTAACTCTTGTAGCGTTTCTGTTATT CAGTTTTCAAATTTATTTTTAACTGCTAAGATTTTCGCTCCCATTAAGCATAACGTGCTTTCAACAATCATCTGAAGTCA TGATTTCATTGATTTGGGTTGAAAATCCAAAGCTTTCATTTTTGTTTACTGAACTGAATTTAATAGTGTTTGGGTGAGT
CDS sequence (LotjaGi6g1v0300300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTCGCAGGCTCCTCTATTCCTCTGCCCCTCATCTTCCAATCCCACCAAAACCAACCAACCTCTACTCCTTCTCCCT CCCCATTCTCAACTCCACCACCCACAACCGCTCCTTCCACACCACCGCCAAACTCCTCTCCTCAATGGGCGACGCCCGGA GACCATTATCAGTCCCCATCCCGACCGTCGACAAAGCCGACCGCTCCGAGCTCCTCCGCGCTCTCGAAGCCTCCCTCGGC TCCTCCTTCAGCTCGGAGCCTTTCTCTCCCAACCCCAACCCTCTTGTCATCGTCATCAGCGGCCCCAGCGGCGTCGGCAA AGACGCCGTCATTTCCCGCCTCCGTGACGCCCGCCGTGGCCTCCACTTCGTCGTCACCGCCACCAGCCGCGCTAAACGCC CCGGCGAGGTTGATGGGCAGGACTACTTCTTCGTCTCCAAGGAGGAGTTTCTGGGGATGGTGGAGAAGGACGAGCTTCTG GAGTACGCGCTGGTGTATGGTGACTACAAAGGGGTGCCGAAGCAGCAGATCCGGGAGTACATGGCAAAGGGGTGTGATGT GGTTCTGAGGGTGGATATTCAGGGTGCTCACACGCTGAGGAAGGTGCTGGGGAAGTCGGCGGTGTTTGTGTTTTTGGTGG CGGAGAGTGAGATGGCGATGGTGGAGAGGCTGGTGGAGAGGAACACGGAGACGGCGGAGTCGTTGCTGGTGAGGATTAGC ACGGCGAGGGAGGAGATGAAGCATGTGAAGAATTTTGATTATGTGGTGGTGAATGCCAAGGGGAAGCTTGAGAATGCTGT GAAGTTGGTGGACTCTATCATTGATGCTGAGAAAGCTAAGGTCCGTCAAAGGACGCTTGTTTTATAG
Protein sequence (LotjaGi6g1v0300300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFRRLLYSSAPHLPIPPKPTNLYSFSLPILNSTTHNRSFHTTAKLLSSMGDARRPLSVPIPTVDKADRSELLRALEASLG SSFSSEPFSPNPNPLVIVISGPSGVGKDAVISRLRDARRGLHFVVTATSRAKRPGEVDGQDYFFVSKEEFLGMVEKDELL EYALVYGDYKGVPKQQIREYMAKGCDVVLRVDIQGAHTLRKVLGKSAVFVFLVAESEMAMVERLVERNTETAESLLVRIS TAREEMKHVKNFDYVVVNAKGKLENAVKLVDSIIDAEKAKVRQRTLVL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 80 | 281 | 202 | 2.8E-72 | – | |
| PANTHER | 80 | 281 | 202 | 2.8E-72 | – | |
| SUPERFAMILY | 92 | 280 | 189 | 1.91E-51 | ||
| SMART | 93 | 278 | 186 | 8.0E-40 | ||
| ProSiteProfiles | 94 | 275 | 182 | 30.55 | ||
| Pfam | 96 | 276 | 181 | 3.0E-39 | ||
| CDD | 96 | 212 | 117 | 3.98327E-48 | – | |
| TIGRFAM | 96 | 275 | 180 | 8.5E-56 | ||
| Gene3D | 98 | 274 | 177 | 1.0E-52 | – | |
| Gene3D | 125 | 184 | 60 | 1.0E-52 | – | |
| ProSitePatterns | 128 | 145 | 18 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Guanylate kinase activity | Catalysis of the reaction: ATP + GMP = ADP + GDP. | ||
| Biological process | Purine nucleotide metabolic process | The chemical reactions and pathways involving a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar. |
Expression pattern of LotjaGi6g1v0300300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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