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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0302100 |
| Transcript ID | LotjaGi6g1v0302100.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | F-box/LRR-repeat protein; TAIR: AT4G15475.1 F-box/RNI-like superfamily protein; Swiss-Prot: sp|Q9C5D2|FBL4_ARATH F-box/LRR-repeat protein 4; TrEMBL-Plants: tr|A0A0S3S3G5|A0A0S3S3G5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0302100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:61939313..61945890) extracted from Lotus japonicus Gifu genome v1.2.
CCCCTTAATAACAAATCTACTTAGACCTCATTCGCAGCTGTTGTCATAAGCGCGCTTAAATAAACCGTTTAGTTGCGCGC GCAAAATTTAATAGGTTATCCTAGGACTAAACATGTTATTACACAAGTCTGATGAAACCTGAATGATGTGCTAATCTCTG TCTGTCACATCGTGTATAAATACCACACACACCGTACGGTTCGCAACTGGATCTGTGGTTCACTTCCCTTTCTTCCTTCA TCTTCATCTTCCTCGTTCTCGTTCTCCATTTCCATCTTCTGATTCTTCTTCGCAATCTCATTGCTTCGCTTCGCTTCGAT TCGATGCGATGCGAGGTCACGATTTGATCAACACTTGTCTCCCCGACGAGTTAATCGTCGAGATCTTCCACCATATCGAG TCCAAATCCACCCGCGACGCCTGCTCCCTCGTCTGCAGACGGTGGCGCCGCCTTGAGCGTCTCTCTCGATCATTCATCCG CATCGGCGCCACCGATTCCCCTGACCTCTTCGTCCACCTCATCTCTTCCCGCTTCTCCAATGTCACCACCGTTCACATCG ACGAGCGCATCTCCGTTCCGCTTCCCCTTAGTGAACTCGTAAGTTTCTGAATCATCATACCCAATTCTCCATTCACGTTT AATTCTGCAAATTGATTGAAAGTTTTGAATGTTTGATTGGTTTGTTTGGTCGATTTTTGTTTTTTTGAGCAGGTGAAAAA ACCCGATAAGGGAGCGTCTTCTTCTTCGGCGCTGAAGCTGCATTACATGAAGGAGAATAATGGGTCTACTTCTGCTGAGG GAGATTTCGATTCGCTATGCTTGTCTGATGCTGGATTGTCTGCTCTCGCGAATGGGTATCCTAAGCTCCAGAAGCTGAAG TTGATTTGGTGTTCTAATGTCACTAGCAAGGGATTGACATCGCTTGCTCGCAAATGCGTGTCTCTGAAAGCCTTGGACTT GCAGGTTTTCTTTTAATTGATTTTGTTTTCAGCTGATTCGAATTCGATTTGGGATTGCTATCATTTTGCATTGTTATGTC CATGTATTTTGATGGAACTGTGTTGTGCTTCTTTGCAATATTTCATTTGATTCCTGACTTGTTGAGAAGGATAAGTATTT CAACTTATGTAGAATATACTTATAGTCATTGTAAGATCATTTCAAAATTCAATTTCCTGTAAGTGCTTGTGGAATAGTTT ATCTAAACTGGCTTTTGATCATTTTGATCAATCACATCAATTGAAAAAAGTTCAAACTTTTCTGATAGAAAAAATGTTTC CTAGTGATTGGCCAAAGAATTTAGATGCTTTGAGTGATAGTTAAGGTTATGTAATAGAAAAGCTAAAAGGGTACTTAATT TGCAGTTTTCTTTTTGATTGAAGCGTTAGTTTATTATCAATGTCCTTGTCTTCTGAAGCATTGCAATTTAAGACCCCCAA CACCATTTTCCCTGCCGCTTTATCAATATCTATGATTCTACTAGCTCAATGGCATAGATGATGCATATTTGTTGTTATAA TGACTGAGATTTTCCTTTAGGGTTGTTATGTGGGAGATCCAGGTATGGCTGCTGTTGGACAGTGCTGCAAAAATCTTGAA GATTTGAATCTGCGTTTCTGTGAAGGCGTGAGTGATAAGGGTTTGGTTGAGTTAGCCGTAGGTGTGGGAAAATCATTAAA ATCTCTTGGTATAGCTGCTTGTGCCAAAGTATCTAACATCACAATGGAAGCTGTTGGATCGCACTGCGGATCCCTTCAGA CCTTGTCATTGGACTCTGAGTTCATCCACAACGAAGGGGTGAATGCTGTGGCTAAAGGATGTCCAAATTTGAAAGCTCTA AAGCTGCAATGTATTAATCTTACAGATGATGCTTTGGAAGCTGTAGGCGTTAGCTGTTTGTCGTTGGAATTGTTGGCTCT ATATAGTTTTCAGAGATTTACTGATAAGTAAGCTGTTTTCTCTCATAATTGCTTTTTCAGAACTTTACTTCATTTGATTA TGGTTGAATTCACAATGTCACAATGCTTAACTTTATTTCTCATGATATGTTATGGGATGTAGTGGACTTAGTGCAGGTTG CAAATTCTTTTCTGGTGTTGTCACTTGAATCAACCATTTGTAGGGTTGATCAATTTAAAGGGACTGTTCTAACAAAAAAA AAATCGTGGTTATTTTTTAATTGCTAAGTCAATCTAGAATGGGATAAGACTTGATTGATTTAATATATATATTTCTTTTT ATTTTCCTTTTGCATGACCTTTAAGGGAATTTAAAATACAATCTTTTGACTGTACCTGAGGGTACAATCTTATTATATGT CTCTTTTTCTAAATTCGCATTCTGCTAAGAATTCTTCCATTTTTTTCAGTTTTAGTCTTCCATTCTGTTCTAATATTTTT TCTTTTAATGATGTCTTCCGTTCAGGGGTTTGTGTGCTATCGGGAATGGATGTAAGAAGTTAAAGAATTTGACTTTAAGT GATTGTTTTTTCCTAAGTGACAAGGGTTTGGAAGCAATTGCCACTGGCTGCAAGGAACTTACTCATCTGGAAGTCAATGG ATGCCACAATATTGGAACTTTTGGTCTAGTATCTGTTGGGAAATTTTGCAAGTACGTTTTTCTCTATGCTAAATTGAACC AAAATGTTATGTATGCCTGGCAACTTTTGGGTGAATCATCATTTGGAATTTGGATCAAGAAGGAAGCAACAGAAGGAGAT TTATGTTTGTGCTCTTGGTTTCTCTGCCTCTCATGTGATGATATTTAATTAGTCTTTCGGTGTGCATTTCATTGCATGAA CTTTTTGTTGGTTGTGTGTTTGTTAACTAAATATATTTGTATCCACCTGTATTGTTGTTCGTGGATTTTTTAAACTGATA AAGATTCCCAGTGTAAACTGCAAAGACAAAATTCATAGTAGTATGAGTATGAACAGGAAAGTCTTGTTCTATTGATATAG CTGTGTGCCCTGTTGGTGCTGTTAACAGGCCTGCTTTCATGCAAAGAATATAAACATTGGAGACTGCTCCTAATTAACTT TTTTTCTGTGGGCCCTGTTGGTGTAGGAAACAGGCTCACTTTGGAGGAAAAACACGTGCTTTTGGAAATTTGATTGATAT TATGTCAATATTGTTTCTCCAGCAGGCTAACCATCACTGAAAATTTGCTTTGACATGGGGGATTTTATGTATTTTGGACT TGGTTATCAATCTTGTGTGGACTTCACATAGTTCATCTTATCATCCATCTTCTTCTGATCATTCTTGTGCCCAGTACTGA TTGGATGTAACTCTTATAGAAATATAAATCTGACACATATAAATGTTGGGGTCTTATATTTGAATATTAGCTCATGATGT TGACATAATATTTGATGACATAAGTTTCAAAATGTTGAACTTCCATCAATGATGCTAATCTCAGCTTTCTACTGTACAGA CATCTCTCTGAGTTAGCATTGCTTTACTGCCAAAAAATTGGCGATGGTGGCCTTCTTAGAGTTGGAAAAGGATGCAAATT CTTGCAAGCTCTTCACTTGGTAGATTGCTCAAGCATTGGAGATGAAGCCATGTGTGCTATAGCTAGGGGCTGCAGGAATT TAAAGAAACTTCATATCCGTCGCTGTTATGAGGTAATCTGTTCGTGCTTGTTTGGCTTTTTGTGTGAAAACAACATTCTT TTCGTGTAATATTTCAAAAAAAAAAATTATTCTTCATGGGATGTGGTGATTTCACATTCAGAATTTTTTTTACCTTAACA CTATCCAATCTAAACTCATTCTCACAAACTTACTTTTAGACAATCATTTCCACTTTCCAGTATAAAATTCTGTCATAACT AGTTCTTTCCTAATTCATTTATGTCAAAATTATTCTACAATCCCAACTAGTTATCTCTTTCTGTCCTTGCTCAGTGTCAA TCCTATTTTTTAAAAAAAAGGAATTGTTTTTTTAGTTTCTTTCATCCCTTCTATTTGCAGTGCTTTTATCAAGGTTACTT ACTAATTGAACTACTACTTGCAGTCTTTTATCTTGGCTTTTAGGCCAACAGATAGAACATTGCTCTGAAGAAGGGATAGA GTATACAATGTACTATATATGATTCAAATTTCAATGAATTCTAAGCTGAAATTATATGTCCTTATTCTTAAAGATTTTCT GTGGCTTTTAACAAGTTGAATATTTGACACCGTTCTCATATTATCAAGAGAAGATTACAGCCAATTGTTCAAGTTAACTT TGTACTGGTCCTGTGCTGTCCCCTGGCTTTTAAGGCAACATTTTATACCTTGTTGTTATGGCTGTGTATCATAATATGCA TTCTGTTGTTTTATTCTTATTATCCATTCTACTTCGCTTCTTTACGCTATGATATGATTAAATTATTCACCTTTCAAAGA GTTGACTTATGGAAAACTTAGCTGAGAGTATTGTAATACTTGAAAGATTATGTATGCCATTCAAGCAGTAAACAAATTTT GTGTAGTTGACCATTTAGGTTTTATATTAGAGGTTTATAGATTTTTGGCTCTGTCTTTATGTTTCTTGCTTTCTTCCCCG TATTAGATTGGGAACAAGGGGATCATTGCTGTTGGCGAGCACTGTAGGTCTCTAACTGATCTTAGCATTCGATTCTGTGA TAGGTAAAAACCTTATTCCCAGCTTTTTTTTATTCTTCCTCTCCATTGAAATCCTCAGTTACATGTATTCTATTTTCTTA ATCTTTATTTTTATTGTTGTTTTCATTGTTGATGATGATGATTATTTGTGTTAGATCCTTTCTTCTGTAGTTTAGTTTTT AATCAGTCTGCATGCTCTAGATTACTTCTGATGTGTCTACCTTTAATTTCTTTGTTAAATTACTAGGGTTGGAGATGAGG CCCTTATTGCTATAGGTGAGGGCTGTTCCCTCCAATATCTGAATGTGAGTGGTTGCCACAAAGTTGGAGATGCCGGATTG ATAGCCATTGCAAGGGGGTGCCCTCAACTCTGTTATTTGGACGTGAGCGTACTGCAGGTGTGTTTTCCTGTCTCTTTTTA TACCAAAGTGATTAATTTCTTTAATTATAGCCCTTTATCATTTGCATTGTACTTCTCATACTTTTTCAGGAATTTCTTGT GCTTTCCTGATTGAGTTTTAGTTTCTACTAAAATATTATTATCAAACATGCCCATGGCCAGCCCAGGACTGCACACACAC ACACACACATAGATAGATAGAAACACATATAGGAGACATGATATCAAACCTTTCCTTTAACATTAGCATGTATGTCTTCT TAACTGAGGCAGATTATTTCAGTGATGTCATAGAAAGTAATTACCTAAATGCCTCTTATCTAATTTTCATGTACTATATT TATGAATCAAATAAAGTTTTTGTGCTTATAGAAGTTCTTAAACAAGAATCTCTGAACCGGACAACTTATAAGCTATACCC CAATGAAGTCTCAGTAGTCAGTAGTCACTACTTGCTTGTTCTTCTTTCATTCTACTTTTCATTGCTTTGCTCAATACAAT TGCAGAATTTGGGTGACATGGCTATGACTGAGTTGGGAGAACACTGTCCATTGATTAGAGAAATAGTCATCTCTCACTGC CGTCAAATAACAGATGTTGGTTTAGCCCATCTTGTAAAAAGCTGCACCATGCTGGAGTCATGCCACATGGTTTATTGCTC TGGTATAACTTCAGCTGGAGTGGCCACCGTGGTTTCTAGCTGTCTCAACATAAAAAAGGTTCTTGTTGAGAAGTGGAAGG TTACCCCGAGGACCAAGCGCCGAGCAGGCTCTGTGATTTCCTACTTGTGTGTGGACCTCTAGACCTCGTTCGGTATATAT GCATACCCCCAATCTTGCTACAGGTTGATGTGTGAATTTAAATAAAGCTGCAAGCTATGTGTTTTTACTTATGCAGAACT TTTGTTCCCTTAGTGAATGAAGTTTTTTCATGTACTAATTCTCATAAGATGATATGAGATGGAGTCATGACTTTGCTGTA GGAGTGTCAGTAGTTCAGGAAACAATAGGCTTAGTTAAATAAATGTGTTTTGATTTATGGATAGACATAGTTTAATAAAT CTTTTGACTCTGATATTTATGTAACACCAAACTTGTTAAAGAAAATAAATATTTGCTTTGGACTTAAGTATGGTCAATCA TTGGATTATTTGCTGAAAGGATTTATTTTTACTGGTTCTGGTTTGTTGCAACTAGGGGTGTTATTAAAAAAAAACCGAAA ACTAATTTAATGAAAAATTCAAAAAATAATTGAGTGTGGCATTTATTTAGTTATTTATATATTGAATGGAAAAAGTTAAA TCAAATATTTCTCTTTAGACAAATTAATGTAGTACCGAATGATTTTATTTTGGAGGTTTAATCAAATTAAAGTCTTTTAG ACAGTAGTTATTAAAATAGGATAATTGAGAAAAAAAAATAGTTGAAATGAGTTTTTTTTTTGTTACATGAGGAAATAGTT GAAATGAGGTTAATTTCAATATTTAATGTTTTTAGGGCCCGTTTGGTGTGACGTATAGTATAAGGCCTGATAGTATAAGA CCTGATAGTATTAGGCCT
CDS sequence (LotjaGi6g1v0302100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCGAGGTCACGATTTGATCAACACTTGTCTCCCCGACGAGTTAATCGTCGAGATCTTCCACCATATCGAGTCCAAATC CACCCGCGACGCCTGCTCCCTCGTCTGCAGACGGTGGCGCCGCCTTGAGCGTCTCTCTCGATCATTCATCCGCATCGGCG CCACCGATTCCCCTGACCTCTTCGTCCACCTCATCTCTTCCCGCTTCTCCAATGTCACCACCGTTCACATCGACGAGCGC ATCTCCGTTCCGCTTCCCCTTAGTGAACTCGTGAAAAAACCCGATAAGGGAGCGTCTTCTTCTTCGGCGCTGAAGCTGCA TTACATGAAGGAGAATAATGGGTCTACTTCTGCTGAGGGAGATTTCGATTCGCTATGCTTGTCTGATGCTGGATTGTCTG CTCTCGCGAATGGGTATCCTAAGCTCCAGAAGCTGAAGTTGATTTGGTGTTCTAATGTCACTAGCAAGGGATTGACATCG CTTGCTCGCAAATGCGTGTCTCTGAAAGCCTTGGACTTGCAGGGTTGTTATGTGGGAGATCCAGGTATGGCTGCTGTTGG ACAGTGCTGCAAAAATCTTGAAGATTTGAATCTGCGTTTCTGTGAAGGCGTGAGTGATAAGGGTTTGGTTGAGTTAGCCG TAGGTGTGGGAAAATCATTAAAATCTCTTGGTATAGCTGCTTGTGCCAAAGTATCTAACATCACAATGGAAGCTGTTGGA TCGCACTGCGGATCCCTTCAGACCTTGTCATTGGACTCTGAGTTCATCCACAACGAAGGGGTGAATGCTGTGGCTAAAGG ATGTCCAAATTTGAAAGCTCTAAAGCTGCAATGTATTAATCTTACAGATGATGCTTTGGAAGCTGTAGGCGTTAGCTGTT TGTCGTTGGAATTGTTGGCTCTATATAGTTTTCAGAGATTTACTGATAAGGGTTTGTGTGCTATCGGGAATGGATGTAAG AAGTTAAAGAATTTGACTTTAAGTGATTGTTTTTTCCTAAGTGACAAGGGTTTGGAAGCAATTGCCACTGGCTGCAAGGA ACTTACTCATCTGGAAGTCAATGGATGCCACAATATTGGAACTTTTGGTCTAGTATCTGTTGGGAAATTTTGCAAACATC TCTCTGAGTTAGCATTGCTTTACTGCCAAAAAATTGGCGATGGTGGCCTTCTTAGAGTTGGAAAAGGATGCAAATTCTTG CAAGCTCTTCACTTGGTAGATTGCTCAAGCATTGGAGATGAAGCCATGTGTGCTATAGCTAGGGGCTGCAGGAATTTAAA GAAACTTCATATCCGTCGCTGTTATGAGATTGGGAACAAGGGGATCATTGCTGTTGGCGAGCACTGTAGGTCTCTAACTG ATCTTAGCATTCGATTCTGTGATAGGGTTGGAGATGAGGCCCTTATTGCTATAGGTGAGGGCTGTTCCCTCCAATATCTG AATGTGAGTGGTTGCCACAAAGTTGGAGATGCCGGATTGATAGCCATTGCAAGGGGGTGCCCTCAACTCTGTTATTTGGA CGTGAGCGTACTGCAGAATTTGGGTGACATGGCTATGACTGAGTTGGGAGAACACTGTCCATTGATTAGAGAAATAGTCA TCTCTCACTGCCGTCAAATAACAGATGTTGGTTTAGCCCATCTTGTAAAAAGCTGCACCATGCTGGAGTCATGCCACATG GTTTATTGCTCTGGTATAACTTCAGCTGGAGTGGCCACCGTGGTTTCTAGCTGTCTCAACATAAAAAAGGTTCTTGTTGA GAAGTGGAAGGTTACCCCGAGGACCAAGCGCCGAGCAGGCTCTGTGATTTCCTACTTGTGTGTGGACCTCTAG
Protein sequence (LotjaGi6g1v0302100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRGHDLINTCLPDELIVEIFHHIESKSTRDACSLVCRRWRRLERLSRSFIRIGATDSPDLFVHLISSRFSNVTTVHIDER ISVPLPLSELVKKPDKGASSSSALKLHYMKENNGSTSAEGDFDSLCLSDAGLSALANGYPKLQKLKLIWCSNVTSKGLTS LARKCVSLKALDLQGCYVGDPGMAAVGQCCKNLEDLNLRFCEGVSDKGLVELAVGVGKSLKSLGIAACAKVSNITMEAVG SHCGSLQTLSLDSEFIHNEGVNAVAKGCPNLKALKLQCINLTDDALEAVGVSCLSLELLALYSFQRFTDKGLCAIGNGCK KLKNLTLSDCFFLSDKGLEAIATGCKELTHLEVNGCHNIGTFGLVSVGKFCKHLSELALLYCQKIGDGGLLRVGKGCKFL QALHLVDCSSIGDEAMCAIARGCRNLKKLHIRRCYEIGNKGIIAVGEHCRSLTDLSIRFCDRVGDEALIAIGEGCSLQYL NVSGCHKVGDAGLIAIARGCPQLCYLDVSVLQNLGDMAMTELGEHCPLIREIVISHCRQITDVGLAHLVKSCTMLESCHM VYCSGITSAGVATVVSSCLNIKKVLVEKWKVTPRTKRRAGSVISYLCVDL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 4 | 47 | 44 | 1.1E-8 | – | |
| ProSiteProfiles | 5 | 52 | 48 | 9.63 | ||
| SUPERFAMILY | 10 | 49 | 40 | 8.37E-8 | ||
| Pfam | 11 | 48 | 38 | 4.9E-9 | ||
| SMART | 11 | 52 | 42 | 1.1E-4 | ||
| PANTHER | 26 | 385 | 360 | 1.4E-105 | – | |
| PANTHER | 26 | 385 | 360 | 1.4E-105 | – | |
| Gene3D | 112 | 187 | 76 | 1.3E-13 | ||
| SUPERFAMILY | 123 | 219 | 97 | 9.42E-12 | – | |
| SMART | 139 | 164 | 26 | 0.032 | ||
| SMART | 165 | 189 | 25 | 9.1 | ||
| Pfam | 165 | 185 | 21 | 0.21 | ||
| Gene3D | 188 | 262 | 75 | 9.4E-14 | ||
| Pfam | 190 | 213 | 24 | 0.093 | ||
| SMART | 190 | 215 | 26 | 6.0E-6 | ||
| SMART | 217 | 242 | 26 | 12.0 | ||
| SMART | 243 | 267 | 25 | 14.0 | ||
| Gene3D | 263 | 358 | 96 | 1.3E-20 | ||
| SUPERFAMILY | 268 | 583 | 316 | 5.49E-48 | – | |
| SMART | 268 | 292 | 25 | 3.4 | ||
| PANTHER | 292 | 598 | 307 | 1.4E-105 | – | |
| PANTHER | 292 | 598 | 307 | 1.4E-105 | – | |
| SMART | 293 | 318 | 26 | 0.038 | ||
| SMART | 319 | 344 | 26 | 2.3E-4 | ||
| Pfam | 319 | 342 | 24 | 0.68 | ||
| SMART | 345 | 370 | 26 | 0.85 | ||
| Gene3D | 359 | 512 | 154 | 2.6E-38 | ||
| SMART | 371 | 396 | 26 | 0.076 | ||
| SMART | 397 | 422 | 26 | 2.3E-4 | ||
| Pfam | 423 | 445 | 23 | 1.2 | ||
| SMART | 423 | 448 | 26 | 0.0087 | ||
| Pfam | 448 | 471 | 24 | 0.02 | ||
| SMART | 449 | 474 | 26 | 0.0011 | ||
| Pfam | 475 | 497 | 23 | 0.0011 | ||
| SMART | 475 | 499 | 25 | 0.022 | ||
| SMART | 500 | 525 | 26 | 18.0 | ||
| Gene3D | 513 | 606 | 94 | 5.1E-15 | ||
| SMART | 526 | 551 | 26 | 5.6E-6 | ||
| SMART | 552 | 577 | 26 | 4.1 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi6g1v0302100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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