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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0303700 |
| Transcript ID | LotjaGi6g1v0303700.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like kinase; TAIR: AT5G18910.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q8RXC8|RBK2_ARATH Receptor-like cytosolic serine/threonine-protein kinase RBK2; TrEMBL-Plants: tr|I1M191|I1M191_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0303700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:62124409..62126556) extracted from Lotus japonicus Gifu genome v1.2.
GTTGTTGTTGAATTAATACCATGTTAGACTTGGAAGCTTTAGAGATTGAAGAGGGAGGGTTACCCGAGTCCTCTCCAAGA AGTCAAGAATCCGAAACGAGTTCCAGGGCCAGCACTTCTGATTCTGAAAGCAATACTCACCAGTGGCGCGGTTTCTTTAA AATACTAAAGAAAGGATCCCAAATGCCTTTCCAAACCTTTCATCCTCTCAAAAATGTTCCGAAGCTGACTAGAAGAAAGA GCAAAAGAATCAGGGAGGACTTGATTCCATCTCTGAATTCACCAGCTCTTCAGTCATCTTTTGACTCTGATATGTACTGC TTCAAATCTTCCTGGAAAAATTTCACTCTCGCAGAGATCCAGGCTGCAACCAATGACTTTAGCCATGGTATGAAAATCAA AACTCACTCTTGGGTAAAAAGGCTTTTGCTTTGTTAGATAATCTAAGTGCGTGTTTGGATTAGAGATATCAGAATTGATT TTCGATAGAATTGAATTTGGTTAAAAATTGATGTTGAAATCATGCTTGTTGGGCTGATATGCTACTCTATGTGAATGTTT CGCTTTGAAGATAATTTAATTGGGGAGGGAGGCTATGCTGAGGTTTACTTAGGAAAATTGGAAGATGGAAACTTTGTTGC AATCAAACGGCTTACAAGAGGGTGCCAAGAAGAAATGACTGCAGATTTCTTGTCTGAGCTTGGCATTATAGTGCATGTGG ACCACCCCAACATTGCTAGATTGATTGGATATGGTGTTGAAGGGGGAATGTTTCTTGTTCTTCAGTTATCTCCACATGGA AGCCTTTCATCCATACTTTATGGTATTTTACCATTTTCAAAGTTTCTGTAATGAGAGACAAGTTTCTTGGGAAAATAAAA GTTAGTTGGTTTCTTCTTCTCTTGCATGATGATTTCAGGACCAAGGGAGAAACTGAATTGGAACATCAGGTATAAGATTG CTTTGGGAACTGCTGAGGGCCTTCGCTATCTGCATGAGGAATGTCAAAGGAGGATTATTCACAAAGATATCAAGGCTTCT AATATACTGCTCTCAGAGGATTTTGAGCCTCAGGTGCCTCTAAATTGCATTTTAGTATCATATTTTCTTTTGTGAGAATC AATTGATAATTTCCAAACATGCACTAAGCCTGAAAAATCTGATTATGGAACATTACAATTTTCAGCAATCATGAACTTCT TCTGCTCAACATCAGATTACATTCTTAATTGTTTCACTTTCTCACTACAATTTTAACTTCAATCCTATGCAGATATCTGA TTTTGGCCTCGCAAAGTGGTTACCTGATCAATGGACTCACCACACTGTTTCCCAAGTGGAAGGGACATTTGGGTTTGTAT ATATAACAGTTTCACCCAAATTTTCCATGTTTTAGTAATTGATAACTTTTTTCACCCTTTTATTTTCTGTTTTCCTTTTT TCATGTCACAACAGATATCTTCCTCCTGAATTCTTCATGCATGGCATAGTAGATGAAAAAACTGATGTCTATGCTTATGG GGTGCTATTGTTAGAGCTCATTACTGGAAGACAAGCTTTGGATAGCTCACAGAAAAGTCTGGTGATGTGGGTATGTCATG CTGTAACACATACAAAATATATGATGATGTTGAAAATAATGTCCATTCTAAATTTCTAATCTACTTACTATGTTATCAAT AATCATGGCAGGCAAAACCTTTGCTATCTTCTAATAACACCAAAGAGCTTGTAGATCCAGTTATGGTTGATGCTTATGAT GAAGAGCAGATGAAACTAGTAATCTTAACAGCTTCTCTGTGCATAGACCAGTCTTCAATTCTGCGACCGCACATGAGCCA GGCATGTCCTTTACTAGCATTTTTTGTCAGAATCAATTCTGGCATGTAGAAGCTACTTAGAGTTTCTCCCCATAATTGAT TTTAAAGTTTATAGAAGGATTTTTACTTTTTATCTTTATTGAAAGCAGGTGTTACAAATACTAAAAGGTGAAGAAGACGG CTTGAAATTGATAAAAGAGCGGCAGAAGTCAAAACTTCAGAGGACATACTCTGAAGAACTCTATGATGCAGAAGAGTACA ACTCAACTAAGATATTGAGTGACAGGGATCGACACATGGAGACTATTTTAGGCTCGAGTAACTCTATC
CDS sequence (LotjaGi6g1v0303700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTAGACTTGGAAGCTTTAGAGATTGAAGAGGGAGGGTTACCCGAGTCCTCTCCAAGAAGTCAAGAATCCGAAACGAG TTCCAGGGCCAGCACTTCTGATTCTGAAAGCAATACTCACCAGTGGCGCGGTTTCTTTAAAATACTAAAGAAAGGATCCC AAATGCCTTTCCAAACCTTTCATCCTCTCAAAAATGTTCCGAAGCTGACTAGAAGAAAGAGCAAAAGAATCAGGGAGGAC TTGATTCCATCTCTGAATTCACCAGCTCTTCAGTCATCTTTTGACTCTGATATGTACTGCTTCAAATCTTCCTGGAAAAA TTTCACTCTCGCAGAGATCCAGGCTGCAACCAATGACTTTAGCCATGATAATTTAATTGGGGAGGGAGGCTATGCTGAGG TTTACTTAGGAAAATTGGAAGATGGAAACTTTGTTGCAATCAAACGGCTTACAAGAGGGTGCCAAGAAGAAATGACTGCA GATTTCTTGTCTGAGCTTGGCATTATAGTGCATGTGGACCACCCCAACATTGCTAGATTGATTGGATATGGTGTTGAAGG GGGAATGTTTCTTGTTCTTCAGTTATCTCCACATGGAAGCCTTTCATCCATACTTTATGGACCAAGGGAGAAACTGAATT GGAACATCAGGTATAAGATTGCTTTGGGAACTGCTGAGGGCCTTCGCTATCTGCATGAGGAATGTCAAAGGAGGATTATT CACAAAGATATCAAGGCTTCTAATATACTGCTCTCAGAGGATTTTGAGCCTCAGATATCTGATTTTGGCCTCGCAAAGTG GTTACCTGATCAATGGACTCACCACACTGTTTCCCAAGTGGAAGGGACATTTGGATATCTTCCTCCTGAATTCTTCATGC ATGGCATAGTAGATGAAAAAACTGATGTCTATGCTTATGGGGTGCTATTGTTAGAGCTCATTACTGGAAGACAAGCTTTG GATAGCTCACAGAAAAGTCTGGTGATGTGGGCAAAACCTTTGCTATCTTCTAATAACACCAAAGAGCTTGTAGATCCAGT TATGGTTGATGCTTATGATGAAGAGCAGATGAAACTAGTAATCTTAACAGCTTCTCTGTGCATAGACCAGTCTTCAATTC TGCGACCGCACATGAGCCAGGCGTGTTACAAATACTAA
Protein sequence (LotjaGi6g1v0303700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLDLEALEIEEGGLPESSPRSQESETSSRASTSDSESNTHQWRGFFKILKKGSQMPFQTFHPLKNVPKLTRRKSKRIRED LIPSLNSPALQSSFDSDMYCFKSSWKNFTLAEIQAATNDFSHDNLIGEGGYAEVYLGKLEDGNFVAIKRLTRGCQEEMTA DFLSELGIIVHVDHPNIARLIGYGVEGGMFLVLQLSPHGSLSSILYGPREKLNWNIRYKIALGTAEGLRYLHEECQRRII HKDIKASNILLSEDFEPQISDFGLAKWLPDQWTHHTVSQVEGTFGYLPPEFFMHGIVDEKTDVYAYGVLLLELITGRQAL DSSQKSLVMWAKPLLSSNNTKELVDPVMVDAYDEEQMKLVILTASLCIDQSSILRPHMSQACYKY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 39 | 39 | - | – | |
| MobiDBLite | 17 | 39 | 23 | - | – | |
| Gene3D | 84 | 194 | 111 | 1.0E-24 | – | |
| PANTHER | 85 | 382 | 298 | 1.5E-137 | – | |
| PANTHER | 85 | 382 | 298 | 1.5E-137 | – | |
| SUPERFAMILY | 99 | 382 | 284 | 5.88E-71 | ||
| SMART | 120 | 360 | 241 | 2.8E-21 | ||
| ProSiteProfiles | 120 | 385 | 266 | 34.082 | ||
| Pfam | 123 | 328 | 206 | 2.0E-39 | ||
| ProSitePatterns | 126 | 148 | 23 | - | ||
| Gene3D | 197 | 385 | 189 | 2.2E-55 | – | |
| ProSitePatterns | 239 | 251 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi6g1v0303700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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