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LotjaGi6g1v0307100.1

Overview

Field Value
Gene ID LotjaGi6g1v0307100
Transcript ID LotjaGi6g1v0307100.1
Lotus japonicus genome version Gifu v1.2
Description Anaphase-promoting complex subunit 7; TAIR: AT2G39090.1 tetratricopeptide repeat (TPR)-containing protein; Swiss-Prot: sp|Q8VY89|APC7_ARATH Anaphase-promoting complex subunit 7; TrEMBL-Plants: tr|A0A0L9VER9|A0A0L9VER9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0307100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:62426945..62434868) extracted from Lotus japonicus Gifu genome v1.2.

TACCTAGACAAAAATAAATAAATAAAAGGGAATTGCAAATTGAAGAGAAGAGAAGAGAAGAGAAAGAAACAGAGTGAAAG AAAGAAAGAGAGTGTTTCAAATACAAGAGCGCCTTGTGTTACCACACAACAATGGAAGTTCCGAAGGATCAAATCGCCAC TCTTCTCGACCATGGCCTCTACAACTCTGCTCAGATGCTCGTAACCCTCTTCTTCTTCTTCGATTCCACATCAAAAATTC TTGCTTTCTCATTTTTAGGTTGATGGGTCTAATCCCAAGTTGTTGTTTTCAACAGGGTTGTTTTCTTGTTTCTTCACCTG CTGCCAATGCTGAATCGGCCCCTCACCTCAAAACTGAGAGCTTGGTCTCTGAAAGTTTCATTTTTTTCATAAATTAATAT GACCCTTTTTTTCATTCCATGATTTTCAATCTCTGCAACTTTTTTGAAGTTATAATGTTGGTTGGTTATTTATTTGTGAT TGTGCAGGTGCTACTTGGTGATTCATTCTTCCAAGAAAGGGAGTATCGTAGAGCCATTGTAAGAGACTGTGCTATCTCTT TTTCTTTCTCCCTTTTGCATTTTGCTGTTGTGAACTATTGATTATTTGTTAGTTTATTCTGTTGAGGCTTTTATGAAAGG CAATTTCTTTGCTACCCCTTTAAAGGTTCTGTACCTTTCTTCATATTAAACTTTTTTAATTTTACAATATAGTCCTTGGT ATGGTAAAAAATGAACTAAAGGGTATAGCACCCTCTTATTTTTCGGTGGATACCGAAGCAATGCCCTTTATGAAATGGAT GATTGAAAAGTTATATCTTTGTGAGAGAGTGAAGTGGTGAAGTCTTATTAATTACTAATTAGCATATCTTTTGTTTATGG GCAGCATACCTATAAGCAAGCTTTGCAACACTACAAGATGATTCCGAAACAGAACATGGCGTCTTCTCGGACTGCGTTGT CATCGAACAGGTCTTCTTCTCCAAATTCGTGCAATGTATCGGTAATCAATGAGAATGAGGTGTGTTGGTGTAATGTGCTT CTTTGAACCTAATTAGTTGGATTCGGTTTATTTGCTTTTAAGACTTTGATTGTGTAGGTTATTTATGAAGGTTCCTTTTC AATCTCTCTTTAACAGGTCAAGTTCAAAATTGCATCATGTCACTGTTCTCTGAATGAGAACAAAGCGGCTTTGGCTGAGG TTTGTTTCTCATTCTCTCTCCTCAGGCGCGATTCATTGGAGTGCTTGCCAACTAACAGTTTATCTTAAATTTTTAAAAAA GGAATCCCGTTATTATATTTTCATGTGAAGGAAGGCCAGTTCTATATTTATTGAGGGATTAACAATGGAATTTTGTCAGT CCTGAATGTGTCATTTTTAATGAGAAACAAAGGTTATGACGTTCGCCGTTACATTCTTGGTTTCTTTTCAATTTTTGTCA TCCCTTATGAGCTGTTTGTGTTGCACTTTCATCACAGATGGATGGAATTCCAGTCAAAGCTAGAAATTTGGCAATGAACT TGTTATTAGGAAAGCTATATCGAATTTGTAGACAAAGTCGAGCTGCTGCTGCTATTTACAAAGAATGTCTAAGGTTGGTA AATTTCTCATACACTAAGTGAACCTTTGATATGGCACCAATAGGCTATCTTTAAGTGCTTTTATGGATTTATTTATTAAT TTAAAATCCTCCTAATTCCAATATTTCATTGAATACTGACCTTCAACCTTCAGGTGTGATGCCTGCTAGCAGCATCCTTA TGCTTGAACCGATATAATTAGCTCACATCAATTACAATTATTAACTTTTATATGTTTGTTCATCCAGAGAATTTTTTTGT ATCTTAGACTTAGTTATTGAGTCCTTGACGGACCTGCTGAAGTATAGAAGCATGGAAAATGGAATGACATTTTGGTATAA AATTAGGGCAAGAATCTTACCTTCAGATGTCTAGTACACCTATGTTGAAAAACCTCATTTTAAATTTGCTTATATGTGGG GTGAGGCATGAAAAACCTACATATATCATATGTGTTGATGGCTTGACTTCTCTCTCACACACTCATATTCTCTTAAAGCT CATATATCATCTGCATCTTGTGGAGCCCCTTTCCGTTTCTGAATTCTTACTGCTTGCTTTCCCTTTAGGCAGTATTAAAT GTGTTATGGACTTGTGGAATTGGCTACATGCTTTGATTCCTTTTTGTATGTGCATTTTCATCTTTCATATGATGTATTAT TAATTTGCTACTGGATTTAAATTGACTTTTGTACTTGTCTTTTTGCCAGACATTGTCCTTATGTACTTGAGGCTATCACT GCTTTATCTGAACTGGGAGTTACTGCAAAAGACATCATTTCGTTGTTTCCTCAGGTTAGTTGGTAATAAAAAGCAGAACT GAAGCTAAATACAGATTCATCCCTTTTATCTTGATTTTTTTCTTTCCAGTTTTGTAAGTTGATCAACTTGTACAGTTTAG AAATAATTTGAGATATAATTGGTGTGTAAACATTTGACTTCAGACTCCAAATAGAAGTGGGAGGGCTTCATCTGATCATA TTGACTCAAGTCGTTGGCTTCAAGTAAGTTTGTACATATACTATATTAGACATTTACATAATACTATATTAGACATTAGT TCAAATCCTTGTTTGTCACCGTGCTTGGAAGGCACTTGCTGCCATTTTTCTGTTTATTGATCTTTCCTTTTTATGATAAG ACATAAGCCTCTATAGATGGCATCATTCTTACCCTGCATAGCATATATGCTGTAAAGAATCCTTGAGAAGTAACAAAAGG TGACTGCTAGTATACTGAATTAACAAAGATTATTACAAACTATTTTGATGGTTTGGTGGTATATTAGATTGTATTGAGCT TGGCCAGTTGATATGCATATCTAAATATAACTATCAGTTGCGATGGAAATAAGATCTAAATGTTACTGCCAAAGGAGCAT GTATTCCATATCACAAGATCTTATTCCTAAAGATAATCACCATAAAAACATGCACAAGAAAATATGGTATCATCTGTTCC ATGGATTGTGTTTGTATACTACCAGGCGAACCCTTAGAACTTGCAACTTTTGATTAACTTTTTCCTTTTTTTCTTTTGCA GCGCTACGTTGAAGCTCAGTGTTGCTTGGCTTCAAATGATTACAAAGGTGAGATATTGTATCTTATATGTAGTCAGTATG GTTCCATGCTTGTCCGTTGGACCTGAAGGATCCATTGGTAAAATGTGTTCTATGGGCATAATCCTGAGGCCAATTGCTGT CACCCAAAGTTAACAAATGATAAATCCTTCTGTAAATTGTTATATTGTTCATGTGACTCATTTTTTCTGCATCAGACTTT TGTTCTTCAGTTTTAATCAAACCTGGTCGAGATTTTAACGAACACACGCACACACACACTTCATACTACCTTCTATCATG CTTTATACTACTTTCTGTGATGTTTCTCTGATACATGCAATTTTACTATGTTCCAATGTTGACAGGTGCCTTGGAACTAT ATGCGGATCTTTTACAGCGTTTCCCTAATAATATACACTTACTACTTGAGATTGCAAAGGTAAGACTATGCAGTGATTTA GAACTTGTGTACTATACTCTTTCAACCTGGCAGATTTTGCGCTTAGTTATATCTTTATTATTCTTTGAGTTGACTGTTTG AATTTTTGAATTTTAAATTTTTTTAACTAAGTGCAGCCCCTGGGCAAAGGATTGCATCCTTTCCCTAGGTGGGGGTTCCT TTCCTCTAATTACTACTTTTGCACTAGAAATTCCTTGAATTGATTGTATAATAAGTAAAACCTGATGTATATTTTAAATG AAGGTTGAGGCTATTATTGGAAAGAATGAAGAGGCCATAATGAATTTTGAGAAGGTAATATGGAGTTATACTTTATTAAG TTCATAGATTTATCTCTGTTTCCAACTTCCTTATTTATGTGTTTACTTAACTTATAATTATGTTGATGATATGGTGATCA CAGGCCCGATCAATTGATCCATACATCATAACATATATGGATGAGTATGCAATGCTTCTAAAGCTGAAGTCTGAATATTC AAAGCTAAACAAGCTAGTACATGATTTATTGAGTATTGATCCTGCAAGACCAGAGGTTTTTGTAGCTTTATCTGTTTTAT GGGAAAGGAAAGATGAGAAAAGGGCATTATCATATGCTGAGCAGGTTGGTATTTTTATTTGATGCACAATGGACTCAATT GTTTTATCTATTGCTGAATTTCTTACATTTGACTACTTTTTCATGTAAATAGAGCATCCGAATGGATGAGAGGCACATAC CAGGCTACCTAATAAAGGTAATATAATGGTTTTGCATCACAGATCAAATGGGGTCTATTTACTCTCTTTAAGTATTATGA ATTTGAGCTGACACGTTGAGTTTATTCAGGGACATCTATTATTGACAATGAAACGGGCAGAAGCTGCTGTGTCTGCATTC AGGGGAGCTCAAGAATTGAGGCCTGACATACGCTCATATCAAGGTTTAATTTGAACTGTAAAAAATATCTAGTTGCGTGA TTTGCATCTCTTGCCTGCAATGAAATTCAAGTTTGCTCCTGCCATTATCCATTGCAAATTCCCAATTATGTGAATGTAAA AATTTACAGACTTTGACATTAATCTGAATATTCCAGGGTTGGTTCATACGTACTTGGCTCTCTCTAAAATTAAAGAGGCT TTATATGCTTCAAGAGAGGCAATGAAAGCAATGCCTCAATCAGCAAAGGCTTTAAAATTAGTAGGTGATGTTCATGCCAG TAATTCTGGTGGCAGAGAAAAGGCAAGTTCTCAGCTCTTAAAAAATAAGTAATTGTAGACTACTTTCTTTGTTTTCTTAT GAGTGAAGTTTCGCGCATTTTTCATACAGGCAAAAAAATTCTACGAGTCTGCATTAAGGCTGGAACCTGGTTACCTTGGA GCTGCTCTAGCTTTGGCTGAGCTCCATGTTATTGAGGGGCGAAATGGAGATGCTGTGTCTCTGCTTGAGCGATATCTTAA AGACTGGGCTGATGATTCTCTTCATGTTAAACTTGCACAAGTTTTTGCTGCCACTAATATGCTGCAGGAGGCTTTGTCAC ATTATCAAGCTGCATTAAGGTTGACTCATATTCTGAAAACATCTATCAGGGTGTAAATAGTGCACTTTTCTGCTTTTTTT AACATGTTAGAAAAGAATTTAGTTTGGCATCACTTGGTGTAAATTGGCATGCACACCATATGGATGGATTAAAGTGGGAG AGCATGTACTGTGTTTTTTAGTTTATGACATGGTTTGCATTTTATATTTCCTTCATACAAAAATTTGGTTTCATGATATA ACTTTCCTCTGCATACTTTTTGTTCATGATTTTATTAAGCTGCTAACATACAGCATAAATGGCAGATTAAATCCCCATAA CGAAGCAGCAAAACGGGGTTTAGAGCGTTTAGAGAAGCAGATGAAGGTTTGCCCTTCTTATTTATTATTATTATTAGTGT TGTTTTTAATCTATCCTTATTTATATTTCTCTCAACTTCTAATCACAAACATCGTTTGTACTGCTGGATTATATGTAAGT TTTTATCTGAAGTAGATCCATGGTCTACTCCAAAAGTGTAATTTCATTGATGACGAGAGGACAAGTTTGAGTGAAGTTAA AATTTGTGATTTTGCATCTGTTTAGGGAGTTGATCCTGATGCACCTGAAGAAGATGAAGATGATGTTGAAGATGCTGACG GAGATCAAGACGAGACTGAACTTCTCTGAGTGTATTAGTGTCCAAAGGAGTCTGTTATGCTGAGAAAATTACTCATGGAA ATAGTTTAATGTCGAGACTGCATTAGCAGTAGGGTGAGAATTACCTTGGTGGCTACAAGGCCTGGCTTTCACAGCAAGAG TTCACATCAGAATACAGAAATTAAATTATTGTCAACTATTGCATCTTGTGGGATGAGTGGTTGGAGTTGGAGTTTGGCCA GAAGGTTGAGTTCCAGTTGGTAAGGCCAAGCTGGAGGCATCTGTTATCTCCATTGTAAGATTATTTTGAAGCTGTCATCT TTAGTGACAAGTTTAATTTAAGTGAGTATTACAAACACTTCTCTCACTTTCTGTAACAATGTGTAAAAGTTCCTCATTTA ATTGTTTCCATCATTAGTCAAAGTGAAATTTCAAGTATAAATTTATTCTTTACAGTCTGGCTAAGTGTTAAGATTTAGGT CGCATATTGAGAGCTTATTAGAGCTTTTCTTTTAAGTGGAATCACTTGTACAAGTGTCCCAAATAAATCCATGCACAAGT GCTTATTGCTAGCGTTTAATAATTGTTATTTATCTAAATGCACTCATCATGTGCACAACTCAAATGGGTGGAGGCAAATT TATGCCCCGCCCAAAAAATGTTACTGAATCTTATATTTTTATTTTAAAAAATAAGTTCTTGTAACTCTCTAATTCACGGA CACCTCATTGCACAAGTTAGAGGTATTAATTATATATTATATAATATTACAAAATGTATATATAATTGTTATTAAATTGA TCACAATTCAACTAGATTGAGATCAATGAACTATAAACTAATAATATCTCCACTTTCTTTATGTTTCACAATCTTCTATT ACGACCGTGGAAGATGGTGCACTTGATCAAACAATGTAGTGCGGATCCAATTTTGTCTCGTACTTTCATTTTGAGAACCA AGCATTGTCCAAGTCTTCAACTCAAAATGCCCGTGTCTTGTCTTATGCATTCACTTTGTCCTCATTCTAGGAAAGGAGTG AGCTTTGTCCCTATCATCATTTTTGCTGAATTTGATTGGTATCATCCATTCACCATTCAGAACACCTTCATTCATTCATC ATACATGAAAAGGCTTCCTCGGAGTTGGTGCTCGATTTTCCATTGATTGCAGCCTCTGTTTGAGATGAAATACTTCAACC TGTGCACTCAAAAATGATGGCAATGTGGTTAAGAAATTCAAATATGGTAACATACTGAACTCCTCAATTTCAACAACATA ATTGGACTAATAAAATGTGAATAAAAGACGGCTACGATTTGTAATTAATCCAAGAATGAAGGTACCTGTAATTGGAATGC CCTGGCTCTTTCTCCAGCAAGAACTCCTCTTGTTGAGTGCAATTCCTACTAAGATTGACAACTCAATATTGGCTTTTATA CAGGAATGCAAGTACTTCCATCAAATGAAGTGCCAAACATACCTTTTGTGTATCATCTAAAACAGCCTTGAGGAATGCCA CATCATGCTCAAGCCTTACATTGTCAGAGTGGACAATGTTGGATAGGTTGTTGGCTTCTTCTTGAGCCAACTCTGAACCA GCTACCTTCTCTCTCAGTAATTCTACCTCCTTCAGCGTGTCAGCTAATTTTTTCTCCACCTCCTGCCTGCTTTTAAAAGC TGATGCTAAGCTTTTCTCAGAAGCTTCTCGGCCTGCTAACGCAGCTGCCAATTGTCCCTCCAGAATGCCGAATTTTCTTA TCAGGGAAGCCACTTTAGTTTCGTAATAATGATATATGTTTGAAGCAGCAGAGTGCGATCCCGATTTAGTGTTTTCAGGG AATGACACATCCTCACTTTCTAGCATGACATTTCCAAGACCTAGATTTTGTTGATTTGAACTTCCGGTTACAAACACCTG CTCCTCCATGTTGATCTTGGCTCCACTCATGTTCCTCTGACTTCCAGAGCCATTTTGATTTGTTCTATGATCTGCTGCCT GAACCATATAATAAGTTAAAATATCAGGTTTATTTTTTTTCTGGTCACAAATGTTGGTATCAGGAATGGAATAGTACACA TATTTCGAGACAGGAAATTCTTAACACCATAATAATTGGTTCACTTTAGATGTACATTCAATTAATGAGAAGGGGTGATA GATG 

CDS sequence (LotjaGi6g1v0307100.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAAGTTCCGAAGGATCAAATCGCCACTCTTCTCGACCATGGCCTCTACAACTCTGCTCAGATGCTCGGTTGTTTTCT TGTTTCTTCACCTGCTGCCAATGCTGAATCGGCCCCTCACCTCAAAACTGAGAGCTTGGTGCTACTTGGTGATTCATTCT TCCAAGAAAGGGAGTATCGTAGAGCCATTCATACCTATAAGCAAGCTTTGCAACACTACAAGATGATTCCGAAACAGAAC ATGGCGTCTTCTCGGACTGCGTTGTCATCGAACAGGTCTTCTTCTCCAAATTCGTGCAATGTATCGGTAATCAATGAGAA TGAGGTCAAGTTCAAAATTGCATCATGTCACTGTTCTCTGAATGAGAACAAAGCGGCTTTGGCTGAGATGGATGGAATTC CAGTCAAAGCTAGAAATTTGGCAATGAACTTGTTATTAGGAAAGCTATATCGAATTTGTAGACAAAGTCGAGCTGCTGCT GCTATTTACAAAGAATGTCTAAGACATTGTCCTTATGTACTTGAGGCTATCACTGCTTTATCTGAACTGGGAGTTACTGC AAAAGACATCATTTCGTTGTTTCCTCAGACTCCAAATAGAAGTGGGAGGGCTTCATCTGATCATATTGACTCAAGTCGTT GGCTTCAACGCTACGTTGAAGCTCAGTGTTGCTTGGCTTCAAATGATTACAAAGGTGCCTTGGAACTATATGCGGATCTT TTACAGCGTTTCCCTAATAATATACACTTACTACTTGAGATTGCAAAGGTTGAGGCTATTATTGGAAAGAATGAAGAGGC CATAATGAATTTTGAGAAGGCCCGATCAATTGATCCATACATCATAACATATATGGATGAGTATGCAATGCTTCTAAAGC TGAAGTCTGAATATTCAAAGCTAAACAAGCTAGTACATGATTTATTGAGTATTGATCCTGCAAGACCAGAGGTTTTTGTA GCTTTATCTGTTTTATGGGAAAGGAAAGATGAGAAAAGGGCATTATCATATGCTGAGCAGAGCATCCGAATGGATGAGAG GCACATACCAGGCTACCTAATAAAGGGACATCTATTATTGACAATGAAACGGGCAGAAGCTGCTGTGTCTGCATTCAGGG GAGCTCAAGAATTGAGGCCTGACATACGCTCATATCAAGGGTTGGTTCATACGTACTTGGCTCTCTCTAAAATTAAAGAG GCTTTATATGCTTCAAGAGAGGCAATGAAAGCAATGCCTCAATCAGCAAAGGCTTTAAAATTAGTAGGTGATGTTCATGC CAGTAATTCTGGTGGCAGAGAAAAGGCAAAAAAATTCTACGAGTCTGCATTAAGGCTGGAACCTGGTTACCTTGGAGCTG CTCTAGCTTTGGCTGAGCTCCATGTTATTGAGGGGCGAAATGGAGATGCTGTGTCTCTGCTTGAGCGATATCTTAAAGAC TGGGCTGATGATTCTCTTCATGTTAAACTTGCACAAGTTTTTGCTGCCACTAATATGCTGCAGGAGGCTTTGTCACATTA TCAAGCTGCATTAAGATTAAATCCCCATAACGAAGCAGCAAAACGGGGTTTAGAGCGTTTAGAGAAGCAGATGAAGGGAG TTGATCCTGATGCACCTGAAGAAGATGAAGATGATGTTGAAGATGCTGACGGAGATCAAGACGAGACTGAACTTCTCTGA 

Protein sequence (LotjaGi6g1v0307100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MEVPKDQIATLLDHGLYNSAQMLGCFLVSSPAANAESAPHLKTESLVLLGDSFFQEREYRRAIHTYKQALQHYKMIPKQN MASSRTALSSNRSSSPNSCNVSVINENEVKFKIASCHCSLNENKAALAEMDGIPVKARNLAMNLLLGKLYRICRQSRAAA AIYKECLRHCPYVLEAITALSELGVTAKDIISLFPQTPNRSGRASSDHIDSSRWLQRYVEAQCCLASNDYKGALELYADL LQRFPNNIHLLLEIAKVEAIIGKNEEAIMNFEKARSIDPYIITYMDEYAMLLKLKSEYSKLNKLVHDLLSIDPARPEVFV ALSVLWERKDEKRALSYAEQSIRMDERHIPGYLIKGHLLLTMKRAEAAVSAFRGAQELRPDIRSYQGLVHTYLALSKIKE ALYASREAMKAMPQSAKALKLVGDVHASNSGGREKAKKFYESALRLEPGYLGAALALAELHVIEGRNGDAVSLLERYLKD WADDSLHVKLAQVFAATNMLQEALSHYQAALRLNPHNEAAKRGLERLEKQMKGVDPDAPEEDEDDVEDADGDQDETELL 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D 5 151 147 2.8E-41
SMART 43 76 34 2.0
ProSiteProfiles 43 76 34 8.519
ProSiteProfiles 43 76 34 8.113
SUPERFAMILY 44 183 140 3.33E-7
PANTHER 45 542 498 2.8E-64
PANTHER 45 542 498 2.8E-64
Pfam 45 70 26 0.013
SMART 140 173 34 160.0
SUPERFAMILY 142 313 172 8.86E-15
Gene3D 204 322 119 1.9E-10
ProSiteProfiles 214 247 34 5.192
SMART 214 247 34 34.0
Pfam 221 247 27 0.079
ProSiteProfiles 228 517 290 24.756
ProSiteProfiles 248 281 34 7.7
SMART 248 281 34 18.0
SUPERFAMILY 323 520 198 9.76E-23
Gene3D 323 485 163 2.2E-22
SMART 349 382 34 51.0
Pfam 350 381 32 0.0054
ProSiteProfiles 382 415 34 7.346
SMART 416 450 35 67.0
Pfam 455 517 63 1.1E-4
SMART 484 517 34 0.031
ProSiteProfiles 484 517 34 10.207
Gene3D 486 543 58 4.9E-5
MobiDBLite 521 536 16 -
MobiDBLite 521 559 39 -
MobiDBLite 537 559 23 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0307100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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