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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0312300 |
| Transcript ID | LotjaGi6g1v0312300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BAG family molecular chaperone regulator; TAIR: AT5G07220.1 BCL-2-associated athanogene 3; Swiss-Prot: sp|Q9LYP4|BAG3_ARATH BAG family molecular chaperone regulator 3; TrEMBL-Plants: tr|A0A0B2PCD3|A0A0B2PCD3_GLYSO BAG family molecular chaperone regulator 2; Found in the gene: LotjaGi6g1v0312300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:63064387..63066059) extracted from Lotus japonicus Gifu genome v1.2.
AGAATGAGAGCAAGAGATGCAACACCAACGACGTCTTCGTCGTCAACCACCGCGAGAGGAGAAGAAGACTTTGAGTGGGA AATGAGACCCGGAGGAATGCTGGTGCAGAAAAGGAGCGCGAAACCGGACGCTCCGGTGCCCAATTTGCGCCTTCGAATTG CTTATGGTGCTCTCCGCTATGAGATCTATGTCACTTCCATGGCCACTTTCGGTGAGTTATCTTCAAATTATGCATGACTC GTTACAATTGAATTAAATTTATACATGATATAATGAGTGTGATGGATGAATAATTAACTGACTCATTCTAACTAACTCAC ATGTCCTTGTAACAGAATCTAAAAGTTCTAATAGAACTTGTAACTTGACTACAATTTAATATAATGTTAGCGGTCGTCTA AGTGACCCTAGATAAAATTTGAGTTAAATCACTCTATATGTTATATGAAATTGTAGATAGATTGAAGATTGGTTCGTGTG GTTGGTGTTTTGGAGATTATTTGAATCTTATTGTTTGAATGACTGTTTTGCCCTTGTTTGAGTGGAATTGGAATGAAAAG TGTGAAAGTGTGACAGGGGAGGTGAAGAAGGTATTGAGCGGGGAAACAGGGTTGAAGGTGGATGAGCAGAAACTGATGTA CGGAGGAAAAGAGCGAGAGAATGGAGAGTTCTTGGATATGTGCGGAGTGAAAGATCGATCCAAGTTGGTGTTGATACAAG ATCCTTCGAGTATTGAGCGACGGCTTATTGAGATGCGTCACGATGCCAAGATCCAGAGTGCGAATCGCTCCATCCTCCAT GTCTCCCTCCAGCTTGATCAGCTTGTAGACCAGGTATGCAATTGCAATGCATGTTTTCTCTATTTTCCATGTGTTTAAGA GTTTATTTGAGCTTATTTTATAGCAGAAGGGCTTATGTGAGTGATTGGAAGAACTTATATAAATAGCTTGTGGACTATCT ATAAGCTATTTTCAACATAATTTTATGAGCTATTAAGATTAGCTTATAAATAAGAGTTTATGTTATGCATAACCTACTCT TAGGATATTTCAATAGGTTTCTCAAATTACATTATAAATAAGCGTTTCGCTAAGTTGTTTCCTTAACACAACACATTGGT AATGAGATTGTTCATGTTTGATTTTCATCTCTTAAATGCCTTTGTTTTTAACTATGAGTTTAATTTTCATGAGCACTTTG GCATCCATCATTTCATGCCATTGAAATCCATAAGCCCCACCAATTTGTGAGTATGACCTATATAACTCATTTTTTTAACA GGTCTCTGCAATTGAAAAGTCTATTTCCAATGGAATCAAAGTACCAGAAGTTCAGATCACCACACTAATTGAAATGCTTA TGAGACAAGCTATCAAATTAGAGAGCATTTCTGCAGAGGGGGATGCCTCTGAGCAGAAAACTTTGCAGGTATTTCCAGTA GAATCTCATCTGGTTGCGAGGTACTTATGAATTCAAGAATAAAATGCAAGAGAAAACAAATTGCTTGTTACATTTAATGG TTGATTTTTCAGGGAAAGAGGGTGCAGAAATGTGTTGAAACTCTGGATCTACTCAAGGTTTCTAATGCAAGAACAAAGCC TGCGGTTGTTACAACCAAGTTGGAGACCTTTTATCACCCTCCATCCTCAACCAAGTGGGAATTATTCGATTGA
CDS sequence (LotjaGi6g1v0312300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGAGCAAGAGATGCAACACCAACGACGTCTTCGTCGTCAACCACCGCGAGAGGAGAAGAAGACTTTGAGTGGGAAAT GAGACCCGGAGGAATGCTGGTGCAGAAAAGGAGCGCGAAACCGGACGCTCCGGTGCCCAATTTGCGCCTTCGAATTGCTT ATGGTGCTCTCCGCTATGAGATCTATGTCACTTCCATGGCCACTTTCGGGGAGGTGAAGAAGGTATTGAGCGGGGAAACA GGGTTGAAGGTGGATGAGCAGAAACTGATGTACGGAGGAAAAGAGCGAGAGAATGGAGAGTTCTTGGATATGTGCGGAGT GAAAGATCGATCCAAGTTGGTGTTGATACAAGATCCTTCGAGTATTGAGCGACGGCTTATTGAGATGCGTCACGATGCCA AGATCCAGAGTGCGAATCGCTCCATCCTCCATGTCTCCCTCCAGCTTGATCAGCTTGTAGACCAGGTCTCTGCAATTGAA AAGTCTATTTCCAATGGAATCAAAGTACCAGAAGTTCAGATCACCACACTAATTGAAATGCTTATGAGACAAGCTATCAA ATTAGAGAGCATTTCTGCAGAGGGGGATGCCTCTGAGCAGAAAACTTTGCAGGGAAAGAGGGTGCAGAAATGTGTTGAAA CTCTGGATCTACTCAAGGTTTCTAATGCAAGAACAAAGCCTGCGGTTGTTACAACCAAGTTGGAGACCTTTTATCACCCT CCATCCTCAACCAAGTGGGAATTATTCGATTGA
Protein sequence (LotjaGi6g1v0312300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRARDATPTTSSSSTTARGEEDFEWEMRPGGMLVQKRSAKPDAPVPNLRLRIAYGALRYEIYVTSMATFGEVKKVLSGET GLKVDEQKLMYGGKERENGEFLDMCGVKDRSKLVLIQDPSSIERRLIEMRHDAKIQSANRSILHVSLQLDQLVDQVSAIE KSISNGIKVPEVQITTLIEMLMRQAIKLESISAEGDASEQKTLQGKRVQKCVETLDLLKVSNARTKPAVVTTKLETFYHP PSSTKWELFD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 26 | 26 | - | – | |
| MobiDBLite | 1 | 18 | 18 | - | – | |
| PANTHER | 7 | 249 | 243 | 2.9E-120 | – | |
| PANTHER | 7 | 249 | 243 | 2.9E-120 | ||
| SUPERFAMILY | 42 | 119 | 78 | 9.9E-14 | ||
| SMART | 46 | 118 | 73 | 0.0091 | ||
| ProSiteProfiles | 46 | 116 | 71 | 12.509 | ||
| Gene3D | 48 | 116 | 69 | 5.6E-20 | – | |
| CDD | 48 | 116 | 69 | 3.57675E-22 | – | |
| Pfam | 59 | 117 | 59 | 1.9E-8 | ||
| SUPERFAMILY | 101 | 223 | 123 | 1.53E-14 | ||
| Gene3D | 118 | 223 | 106 | 7.6E-31 | ||
| Pfam | 145 | 217 | 73 | 3.5E-8 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | Chaperone binding | Interacting selectively and non-covalently with a chaperone protein, a class of proteins that bind to nascent or unfolded polypeptides and ensure correct folding or transport. |
Expression pattern of LotjaGi6g1v0312300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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