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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0312500 |
| Transcript ID | LotjaGi6g1v0312500.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transporter; TAIR: AT2G43330.1 inositol transporter 1; Swiss-Prot: sp|Q8VZR6|INT1_ARATH Inositol transporter 1; TrEMBL-Plants: tr|G7JAP8|G7JAP8_MEDTR Sugar porter (SP) family MFS transporter; Found in the gene: LotjaGi6g1v0312500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:63074009..63078689) extracted from Lotus japonicus Gifu genome v1.2.
GTCGACATTAACGAACACTGAACTGAATATATACTATGATTGTAAATCTGATGACATTACTTGATGGCGAACACGTCGTC ATTAACTTAATTTAGACAAAAGTGTCCCCTAATTATAATTTATTTTTGCATTTTGATCTGAAACAAAACGTTGAAATAGT GTCTCCGTCATCTCTCTTCTCTTTCTGCAACCAACTCCCACGAGACGGTCTTGGTCTTCGAAGATGGTGCATACAAACAC GATGACGACGCCTGGGAGCTCCGATTACTTGGAATTGTATCCGGAGAGGAAAATGTCCTACTTCAAGAATCCCTACATTC TCGGAGTCACTGCAGCTGCTGGCATAGGTGGACTCCTCTTCGGCTACGATACAGGTAACACTAACACCACCTCTTTCAAT CTCAATCTTCGGCATAGGTGGATTGGATTTTTATTAGTTTAAGTTCATGAACTAATTTGATTATCAATTTGAGATTCTCA GCTTTTAATTGTTGTATCACTTTTCTTGTATGTGTAATGTTTACATTTTATCTTAATCCATTTATTAAATATGTGCTTTT TAACTGTTTGTGTATGTCTACATGATGATGATCCCTGTATATTGTTCAAAGTTGTCAATTGTTGATGGAAATAGGTGGGG ATGAAGTGAAATAAGAATAGGATTCATGTTTTGAATTGTAATGAAACAAGATGGAATGGACTGCGTAATGCATTTAATTT AATTTCATTCAAAACTTTTTTTTTCTTTCTAATTTGGAGAATTTCATGGATAAGATTTTTCTTTTCAATTAATGGATTGG TAATTGATTTCATTTTGTTCATTTCACTCTATTCTGACTTAACTTGGAACTCTGTTATTTGCTGCAGGTGTTATATCAGG GGCCCTTCTCTATATTAAAGATGATTTTGAGGAAGTCCGCAGAAGTAGCTTACTTCAGGTACAAGCTTTTCTGCTCAGAT GAATGTTACATTCATTTTTTTGATTGCCTGTTTCATAAGTGGTTAGTTTGGTCTCAGATCTATAAACACGGTAGGTTTAA TTTCAAATGTACACGATTTTGGCAGTTCGGAAGAGAAAGAAGATATGGATATGATAATGTATTGTTTTATGGCTTTACTG CTGCAATTGCAGAATTTATGGTTCCAGTGCCAAAAATAGAGACAACTTCTCGCTAGTTACTGCACTCCGGAGTTTTCATG GTGTGCTACTGTGCATTATTTATAATTTGTACGTTTATTGCTTATTCCTTTTTCCTGTTTCTTTTATCCTTTTATTTTTC TGTATGCCTGTGGCTCTGTAGAGGGTGGATTGTTGGAGTTGTACTTTATTTCCACTAAAAGCCAGAAACATTACTATCTA TTTAGATAAACTAAACTTGCTGCTTGTTAGTATCCTTTAGCATACATGTCCATATTGCCTTCTCTGCAATCTAAATCATT TTTTACTTTAACTTGCCAGGAAACAATTGTAAGCATGGCATTGGTTGGTGCAATTATTGGAGCAGCAACAGGTGGCTGGA TTAATGATGCGTTTGGACGTAAGAAGGCCACCCTCAGTGCTGATGTTGTCTTCACTCTTGGATCACTTGTTATGGCTGCT GCACCAGATGCATATTTTGTCATATTTGGCCGTCTTCTTGTTGGCCTTGGGATTGGTGTAGCTTCTGTCACTGCTCCTGT ATATATTGCAGAATCCTCACCATCAGAAATAAGGGGTTCATTAGTGAGCACAAATGTGCTTATGATAACTGGTGGACAGT TTCTTTCTTACCTCATAAATCTTGCCTTTACCGAGGTAGGCCGCCTATCGCTCTTTTTTCTTTAAACTTCCTATTTCTAG TCATGCTGACACTGCTTGGCTGCTTTGGCATTCAAGTAAATGCTCTGTGGAAGAAAACTGTTAATAGTTTATATTTATGT GAATGAGCTATTGTGCGGGTTTGGCTTCTACATAAATTGTCCAAACGTGTTTGCCTAACTTGTTGGGAGTTTTGATTTGT CAGGGGCTGTAAGTCAGAGGTTGTCACTATTTTTGGATGGTTTAATAGCCTTTGGTATTGGGTGTTTGGCTTTGGGATAG AAAGCATTGTATTTTTAGCTTCTGTCTTTCATTTGTACTGAGGGTTGATGTCTTTCTCATCCTTTAGCATTTCATGGGGT GTTTTTGTTTAATATTCTTGGGGTGTATTTTAGAATTTTCTGGTTTTATCCATTGAGAAGGATTGTTCCTCAAGTTCTAT ATTATTATTGAATGAATTCTTTTTCTTTCGAAAAAAAAAGCTTAATTTTGTACTATTCGTGTAAATCTGTATACTGTTTT TTTAATGATGTGTTGCAGCGTAGTTCATTAAAGGGCATCATGACATTATCATTGGATAATAGTGAAAAGCTTTATCACAC TCACCATCTATTTAAAATGAATTCAATTTTATATTTCTAAAAACTTGCAAGGGCATGTTGTTCAAGCAACAGTTGATGCA ATGAAAGTCTGAATAATTTGATATTTTCTTTGGCTCAATGGCATTGTTATTGCCTATTAAGGGATTTTGTAATGCTTTAG AAATCACCTAATGAAATCTTAATGGGGCAGGTTCCAGGGACTTGGCGATGGATGCTAGGAGTTGCTGGTTTGCCAGCTGT TATTCAGTTTTGTGTTATGCTTTTCCTGCCTGAGTCTCCAAGGTGGCTTTTCCTAAAGGTGAAAAGCTTCTATTTCATTT GATGAATTATATTTGAGAATTGTTAACTTAAATGCTTTCCCAGTGCTGAAAGTTATATTACCCTGGTATCTTATATACAG AATAGGAAAGAGGAAGCTATTTCTGTACTTCGTAATATCTATGATTACGAGCGCCTGGAAGATGAAGTCAATTACTTCGA CTCTGTTTCTCAGCAAGAACTTCAGAAACGGATGGGCATTAAATCCATGGATGTTTTCAGATCAAAGGAAATCAGACATG CATTTTTTGTTGGGGCTGGACTTCAGGTCATTGACACAAGCCTAACTTTTCTGTTTCTAAACTACACTTCCTTGTGTTTT TTTTTTATAGAACCAAGTTACAGTAAGCTTCTATAACGTTTTACAGTCTCAACACTCAACAGTATTGAATGCATCATGCA TACTTTTGAAATTGCTTGCATCTTAAGCTGTTTAACTTCTTTCACTTGTTCATTATGCTGCAGGCTTTTCAGCAGTTCAC AGGCATCAGCATAGTCATGTACTACAGCCCCACAATCATTCAAATGGCTGGGTTTAATTCCAACCAGTTAGCTCTTCTCT TATCCCTCATTGTTGCTGGCATGAATGTTGCTGGAACAATTCTTGGCATTTATGTAATTGACCGTGCAGGGCGAAGAAAA TTGGCTCTCTCAAGCATGTCAGGTGTAATTGTAGCTCTGGCAATCCTTTCTGCAGGATCATACCTTGAAGCATCTGACTC CACAAATAGAACCTACGGGTGGATTGCAGTCATTGGTTTAGCTATGTACCTTCTTTTTTTCGCTCCAGGAATGGGACCAG TGCCATGGACTGTGAACTCAGAAATCTATCCAGAAGAATTCCGAGGTGTATGTGGGGGCATGTCAGCCACTGTAAACTGG GTTTGCAGTGTGATAATGTCACAGAGTTTTCTTTCAATTTCTGATGCTGTTGGCCTTGGTGGGAGTTTTGCGATTCTTGG TGTTATAGCCGTGGTTGCATTCTTATTTGTGCTCTTGTTTGTGCCAGAGACAAAAGGATTGACATTTGAAGAAATGACAC TCATATGGAAGAGGAGAGCCAGGGGTAAAGATTATGACACACAAAGCCTTCTTGAGGGAAACCAGTCCTAATCCTAAGGT GTCTCGGTTTGTGAGCAGCAGCATTATTTGACTGGAGCTAGGAAACCAGTCATAGGCGTTTGATATATATGGCTTTGTGT GCAGCAGAATTTTAAAGATACATATATTTCTGAAATAGATTTTTATAAAACATACATTTATATTCATTTCTTTAATAATA TAATTTATATTGATTTAATACTTAAGCAAATCACGGTTTACACAACTAGTTTTACTTTAATTTTGGTAAATTTGTTTCAC AAGTGAAACAATAATACAATTGAAAGTAAACTAAAGGAGAGCCATTTGCTTGATATTAATTGGATAAGAATCATCGGGCG GGCCATTAACAGCTCTCCATGCATATATGTATATTACAGGTTGTGTTGGGTGGAATGCATCCCAAAAGACATATCGGCTT CTGAATGCACATGGCAGTTGATTAGGGAGACATGATATTTGGCCGCGATACATTCCAATTCCACAACAGGCTCTATCAAC AACATTAAGCGCTGCAAAAGATAATCATTACCATTTGGTTAAATTCATCATCTTCATTTTTATTCATTGTGTAAATTGAT TGAGAAGAGATTATTATATCTTACAGTAGGCAGAAGGGTTGTTTAGAATATCTCCAATGATACGATAAGTGTTACCATAT GTAAATATGGCATCAGGGTGATTTTTGTTCAATTGTTCCACCGTTGATCTAAGCCCCTCATTGAAGGGTCCAACCATTTG ATTTACCAAGTCCACACACCTTCCTGGTGGGGACAATCCTCTGGCTCTTTGATGAGGGGTGCAACCGAGTGGTCCAATTC CTGCTAGGAAGAACTTCCTGAGACCCAAGTTATATAGTGCC
CDS sequence (LotjaGi6g1v0312500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGCATACAAACACGATGACGACGCCTGGGAGCTCCGATTACTTGGAATTGTATCCGGAGAGGAAAATGTCCTACTT CAAGAATCCCTACATTCTCGGAGTCACTGCAGCTGCTGGCATAGGTGGACTCCTCTTCGGCTACGATACAGGTGTTATAT CAGGGGCCCTTCTCTATATTAAAGATGATTTTGAGGAAGTCCGCAGAAGTAGCTTACTTCAGGAAACAATTGTAAGCATG GCATTGGTTGGTGCAATTATTGGAGCAGCAACAGGTGGCTGGATTAATGATGCGTTTGGACGTAAGAAGGCCACCCTCAG TGCTGATGTTGTCTTCACTCTTGGATCACTTGTTATGGCTGCTGCACCAGATGCATATTTTGTCATATTTGGCCGTCTTC TTGTTGGCCTTGGGATTGGTGTAGCTTCTGTCACTGCTCCTGTATATATTGCAGAATCCTCACCATCAGAAATAAGGGGT TCATTAGTGAGCACAAATGTGCTTATGATAACTGGTGGACAGTTTCTTTCTTACCTCATAAATCTTGCCTTTACCGAGGT TCCAGGGACTTGGCGATGGATGCTAGGAGTTGCTGGTTTGCCAGCTGTTATTCAGTTTTGTGTTATGCTTTTCCTGCCTG AGTCTCCAAGGTGGCTTTTCCTAAAGAATAGGAAAGAGGAAGCTATTTCTGTACTTCGTAATATCTATGATTACGAGCGC CTGGAAGATGAAGTCAATTACTTCGACTCTGTTTCTCAGCAAGAACTTCAGAAACGGATGGGCATTAAATCCATGGATGT TTTCAGATCAAAGGAAATCAGACATGCATTTTTTGTTGGGGCTGGACTTCAGGCTTTTCAGCAGTTCACAGGCATCAGCA TAGTCATGTACTACAGCCCCACAATCATTCAAATGGCTGGGTTTAATTCCAACCAGTTAGCTCTTCTCTTATCCCTCATT GTTGCTGGCATGAATGTTGCTGGAACAATTCTTGGCATTTATGTAATTGACCGTGCAGGGCGAAGAAAATTGGCTCTCTC AAGCATGTCAGGTGTAATTGTAGCTCTGGCAATCCTTTCTGCAGGATCATACCTTGAAGCATCTGACTCCACAAATAGAA CCTACGGGTGGATTGCAGTCATTGGTTTAGCTATGTACCTTCTTTTTTTCGCTCCAGGAATGGGACCAGTGCCATGGACT GTGAACTCAGAAATCTATCCAGAAGAATTCCGAGAGACAAAAGGATTGACATTTGAAGAAATGACACTCATATGGAAGAG GAGAGCCAGGGGTAAAGATTATGACACACAAAGCCTTCTTGAGGGAAACCAGTCCTAA
Protein sequence (LotjaGi6g1v0312500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVHTNTMTTPGSSDYLELYPERKMSYFKNPYILGVTAAAGIGGLLFGYDTGVISGALLYIKDDFEEVRRSSLLQETIVSM ALVGAIIGAATGGWINDAFGRKKATLSADVVFTLGSLVMAAAPDAYFVIFGRLLVGLGIGVASVTAPVYIAESSPSEIRG SLVSTNVLMITGGQFLSYLINLAFTEVPGTWRWMLGVAGLPAVIQFCVMLFLPESPRWLFLKNRKEEAISVLRNIYDYER LEDEVNYFDSVSQQELQKRMGIKSMDVFRSKEIRHAFFVGAGLQAFQQFTGISIVMYYSPTIIQMAGFNSNQLALLLSLI VAGMNVAGTILGIYVIDRAGRRKLALSSMSGVIVALAILSAGSYLEASDSTNRTYGWIAVIGLAMYLLFFAPGMGPVPWT VNSEIYPEEFRETKGLTFEEMTLIWKRRARGKDYDTQSLLEGNQS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 30 | 30 | - | – | |
| PANTHER | 6 | 411 | 406 | 4.6E-215 | – | |
| PANTHER | 6 | 411 | 406 | 4.6E-215 | – | |
| SUPERFAMILY | 26 | 411 | 386 | 3.01E-61 | ||
| Gene3D | 27 | 416 | 390 | 3.5E-108 | – | |
| TIGRFAM | 27 | 412 | 386 | 3.6E-104 | ||
| Phobius | 31 | 60 | 30 | - | – | |
| TMHMM | 31 | 53 | 23 | - | – | |
| ProSiteProfiles | 35 | 445 | 411 | 42.961 | ||
| Pfam | 36 | 412 | 377 | 1.9E-99 | ||
| CDD | 38 | 413 | 376 | 1.00928E-159 | – | |
| PRINTS | 43 | 53 | 11 | 3.1E-26 | ||
| Phobius | 61 | 71 | 11 | - | – | |
| Phobius | 72 | 94 | 23 | - | – | |
| TMHMM | 73 | 95 | 23 | - | – | |
| Phobius | 95 | 105 | 11 | - | – | |
| TMHMM | 104 | 123 | 20 | - | – | |
| Phobius | 106 | 123 | 18 | - | – | |
| Phobius | 124 | 128 | 5 | - | – | |
| TMHMM | 128 | 150 | 23 | - | – | |
| Phobius | 129 | 150 | 22 | - | – | |
| PRINTS | 129 | 148 | 20 | 3.1E-26 | ||
| ProSitePatterns | 134 | 159 | 26 | - | ||
| Phobius | 151 | 161 | 11 | - | – | |
| Phobius | 162 | 184 | 23 | - | – | |
| TMHMM | 163 | 185 | 23 | - | – | |
| Phobius | 185 | 189 | 5 | - | – | |
| TMHMM | 190 | 212 | 23 | - | – | |
| Phobius | 190 | 212 | 23 | - | – | |
| Phobius | 213 | 275 | 63 | - | – | |
| Phobius | 276 | 298 | 23 | - | – | |
| TMHMM | 277 | 299 | 23 | - | – | |
| PRINTS | 287 | 297 | 11 | 3.1E-26 | ||
| Phobius | 299 | 312 | 14 | - | – | |
| Phobius | 313 | 337 | 25 | - | – | |
| TMHMM | 314 | 336 | 23 | - | – | |
| ProSitePatterns | 332 | 348 | 17 | - | ||
| Phobius | 338 | 343 | 6 | - | – | |
| TMHMM | 343 | 365 | 23 | - | – | |
| Phobius | 344 | 365 | 22 | - | – | |
| Phobius | 366 | 376 | 11 | - | – | |
| TMHMM | 375 | 397 | 23 | - | – | |
| Phobius | 377 | 401 | 25 | - | – | |
| PRINTS | 380 | 401 | 22 | 3.1E-26 | ||
| Phobius | 402 | 445 | 44 | - | – | |
| PRINTS | 403 | 415 | 13 | 3.1E-26 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi6g1v0312500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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