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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0322600 |
| Transcript ID | LotjaGi6g1v0322600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | WD40 repeat-like protein; TAIR: AT1G29260.1 peroxin 7; Swiss-Prot: sp|Q9XF57|PEX7_ARATH Peroxisome biogenesis protein 7; TrEMBL-Plants: tr|I1M1T5|I1M1T5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0322600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:63855128..63860712) extracted from Lotus japonicus Gifu genome v1.2.
GTTTCAATGAAAATAAAAACTCTCAATTTTTTTAATTGCAACTTTGGTTAGTGTGAAATATGCAAATTAAAAAAGTGGAA AAAAACAAAATCTGGAGAACTGAATAGAGGGATTGAATGTAGTCAGTAGTCACCACTCTGGATTTGGAGTCAAGAACCCA AAAACCTTCAATCTTCTTCCAGAAATTGAAGCAATCCGCAATCCAATTGAATTAAACAATGCCCGTTTTCAAAACCCCTT TCAACGGTTACTCCGTCAAGTTCAGCCCATTTTACGAGAATCGCCTCGCCGTCGCCACCGCCCAGAACTTCGGAATCCTC GGCAACGGCCGTCTCCACGTCCTCGACCTCTCCCCTGACCCCACCATCCCCATCTCCGAGCTCGTCGCTTACGACACCGC TGACGGCATCTACGACCTCGCCTGGTCTGAATCCCACGAATCCCTCATCGTCGCCGCCATCGCCGACGGCTCCGTCAAGC TCTACGACCTCGCTCTCCCCCCCACCGCCAACCCCATCCGCTCCCTCCAGGAACATACCCGCGAGGTTCACTCCGCCGAT TACAACCCCGTCCGCCGTGACTCCTTCATCTCTGCTTCCTGGGATGACACCGTCAAGCTCTGGACTCTCGACCGCCCCAC CTCTGTCAGAACCTTCAAGGAGCATGCCTACTGCGTCTACTCCGCCGTCTGGAACCCCCGCCACGCCGATGTATTCGCAT CCGCGTCCGGCGACTGCACACTCCGCATCTGGGACGTTCGTGAACCCGGCTCCACCATGATCCTCCCTGCTCATGAATTC GAGATTCTCGCTTGTGATTGGAACAAGTATGATGACTGTATCATTGCCACTGCGTCTGTGGATAAGTCCATCAAGGTGTG GGATGTGAGGAGTTTCAGGGTTCCTATTGCTGTGCTTAATGGGCATGGCTATGCTGTGAGGAAGGTTAGATTCTCGCCGC ATGTGCGGAATTTGATGGTGTCTTGCTCTTATGATATGACTGTTTGTGCTTGGGATTTCATGGTGGAGGATGCACTTGTG AGTAGGTATGATCATCACACTGAGTTTGCTGTTGGGTTGGATATGAGTGTGCTTGTTGAGGGTCTCATGGCTAGTACTGG GTGGGATGAGCTTGTTTATGTGTGGCAGCATGGAACTGATCCTAGAGCAGCTTGAAGGGGAAGGTAGCTTTTCTGTTTTG TTTGTTCCCTTTGCTTTTTATATGAGGTGCAAATGCAAAAGTGATATGATTCAGTATGGAGGAGGAAAGGGTGGATACAC TTCCATTACACTTGTTCTCTCTTGTATATTCAAATTGATAAACATGATATTTACATGAATTATGATGCTTCAGCTTGATT TCTCCCTTGATGAATGTATGTTGGGTTGGATCTGCTACTTGCTTTCTGTGGAAGAAAGAGTTATGCTTGCTACATTGTTT GTCTCTATTGAGTTAATAAATTCTGATGATATCACTTTCAATTGCAGTGTTGGTTCTATAATTTCAATGCCGTGTCTGAG GAAGTTAATCTTTTGTGTATGTATGCCTTGTGTGTATTTTTACAGTATCAGATTACAAAATTCTCATTGCTTTTGGTTGT ACTTTTTGACTGGGGTGGATTTCAGTACTTGTTTATTCAAGCTTCCAACTGTTTCTACAGAGTAAATGATTAATTTAGAG TGTTCAATCATAGTAGTCAATCGCGGATCGCGGCCTGTCGCGGATGACTCCCAAAAATGAAATCCCATACAAGGGAAGGC CGCTATTGGCCGCGAATAGCGGGATTTACGGGCCCCAATCCCGTCGCGGCAGGGGTCCGCTACGCGATGGCGCTATCACG CGCTATCAATAACTATGTGTTCAATAGATCTGTCCCCATATTAAGTAACAATGGTAACAGGTGTTGTTAGGTAGGGCAAC AACAGGTGTTGTTTCAAATTTTGGAAGTTGTACAAAATTGTAGTATGAATGTTTTATGTTATGGAGGTTGCATTTGTTGT TGTGACGATAAGGGTATTGTACCTAGGATGAATCGTCAAATATTTGTGGATAATCAGTTTCAGGATTAAATTTGAAAATT CTTCAATTATAATCAACAAACAATTGAATGAATAGATGATTCATGATTGACAATTCTGGGTACCAGAGAGACCCCATAAG CTGGTTGATTGTCTTTGAGTTCCTACTTTTTCTCTTGATAAAGGGTATGAATTTCTGCATCAGTGGCAATTAGAAGGTGA AAACAACTGAGGCATATTCTATATATAAATACTGAAATAATTTACTAAAACTTAACAAATGTTGTGTCTACCACAAATAA TACCAGAAAAAGCTACTAAGACAGGGAAATTTCACTTAAACAATCCCCCCCTCCAGGTATTGGGGCTTAAGCAAATTTAT CCCTCAACTTTTAACTTCTTTGCACTCTGTTGGTCGAATTTTTTCGCTACCTTCTCCACATGTGAATTATCCTATCACCT GTAGTTGATTCCTCATTGCTGAATGCCTGAATGTATGTTGAGAAGCCAATAATCTTCTAAATTAGCTATAGTGACACGAA GGCAACCTAGAGTTTTCTGGTCTCTGATTAAGGTATCTCCAAAGATATTCCTGGAATAAGAAGACCTTCCCGAAAATGAC TTCTCCTGGGTAACTTTGGTTCTCCACTTCTCCTAGAAGTGCAGCTCGCTTACCACGTTCCAAACCTTATTGGTTGCAAA AGGAAACCTTAGCAAACAGATATATAAGTACATCTTTTTCTCTTTCTTCTTACTTAAGAAACTGAGGATTCTAAATTCTG AAAATTTGAGGAAGGTATCTGCACAAATCTCAGATATACATTAGGTGATGAAGGATGGTATTATTGTGATTATAAAAGAA CATAATATCCTTAATGTTCTCTTCATGGTTATTTTGTATGGTTCCTTCCTTGGTTATTTTTTGTTGGAGCAGCCTCATTA TCCAAACATGGTCTGTAATACTTTACACTTTATCTGATGTTGATCAATGAAGTTGAGACTTGAGATGTAAAAAGTTTCAG GGCTCTGAACATTAAACTCAGATATCAGGATTTTGGCTCAAATGAGAGTAGTTCTATGTACAACTTGTGGTTACTGAGAT GACTTTTTACACAGTGGATAACCATGTAACAAACAAACAGTGGATAACAAATTAACATGTTTATTTTGACATTGTTCATC TTATCCTCAGTATTTCCCCCTTCTTTCCTCTTTCAATTTGAAAATTTTGGTTTTCTTCTTCTTAAGCACCACTTAAAAAC TTGTCAAACTGTCAAATTAGTGATTTTATTTGCTCTCCCCCTGATTTGGCAGACTCAGCCCTTGTTTGTATTTGCTGCAT CCCACCGCAATAGGCCTTAAGCAAGGAGAAACTGATGTCCTCTTGGGTAAACTTGCCTGAGGAAGAAGCTTAATTCCCAA TCATGCTGTCATTGACCAAATTTTTTTTAGCTGTCATAGGCTTGTGATAAAATTTATTCACACCCAAAATACACATAGAA ATAGGTATATAAAAGAGAAAAATGAAAGATATGATTAATAATGAAATAACAGCAGAAGAGTAAGTTGATGAAAAATGTGA TTGAAAAATAAGTTGGTGCGAATGTCTCAACATGCATTGACCCACTGCTATCCTGTCATGTTATGAAACTCATGGCCTTT TTCTTCTTAGTCGACACTATTTGTCTTATCTCAGTTATATGTACATAAACTAGTGTGGTCATTGAAGTCATGAATATTTT AGATGCTTTGGAGTTTTCTCTCGTGTTTGGCACTCACATGATGTCATCTACTCGATGTTTTCAGTACCATTCCATTACTT ACTGGTGACTGATGATCAAATCACAGATGGTAGTCCAGCTATTTTATTTATTTATGGAAATCTATTTTAAGCCCCTTTTT ATTATTTAAACACGTATATTCCTATTTATGGCACATGGTTTCAGCCTAAACAAGGGTCTCTCTTGGAATGACTCTGGTTA CTTCACAACACAATGCTCTTGTTATATGATATCAAATCAATGTGTGCCGCCTTTTTGGGAGGAGTTTATTATGGTCATCT AAAAACTTGTGTAAGGTTACACCATGCTATTTTGATCTGCAGTAGCAGGTTTAATAGGTTTTTAAAAGAAAATCATAAAA CATACTATATATTAGTAAATTAGTTAATGAAGGATTAGATTAATTAGTGAATATCTTTCAAAAAAAGGTTAATTAGTGAA TAAATTATCCTCCTCCTTCCTCAACCCATCATCTTCTCCACCCCATCAGAAACCCAATGATTATCCTCCTCCTTGCACTC ACCCACAAACCCATATAACCCACCCCCTTTATCTCTGTCGCAACCCCACAACCACTCCCACCGAAAATCGACCCCCACCC CCAGATCTGAAACCCTGCCATACCCGGAAAAAAAAATAAAATAGGCAAAAAAATATAAGAATCATTCATCATGAATGAAA CATTTGCTATTTGAGCATCTGGGTATTTAGCATACCAAGAAGGAGAGATTTGACAATTAGTCAAATGCACCACCACGCCT TCAACCGCACTGCGCCACGCCCCCACCACCACACGACGCAAAGCTCGCAGCTTTTCCACCCTCAGTTCAAGTAACCTCCA TCACAGAAGGGAAAAAAAAAACAGATCTTGATGAAGAATTCCCAGATCTGGTTCGATCTTGCTAGGTTGAAGTGTAGTGC GGTAGAGTTCGAAGAAACAGCTCTGGAATTGGTTGAGGGTGGTGATGGAGGTCCGTGATTTTGAACGAAGGAGAGGAGTG GTGGCCGGCGGTGCACCACCATCACCATACCCAGATCTGAAAATTCATTTTTGTTTCCTTCTTCAATATTGCTGCTCTGA GGTCTTAAAACAAAAAATAAAAAAGTGAGTTTTCATTGTTTTTATCTGTTGAAAACCGAAAAAGAAAGCAACAATTTTAT TTTGTTTCAAGACCTGTGCTGTGCGTGATGTACATGGAAAAAGAAATTTGGTTGATTTAATGTATTGGTTGAAGATGATG ATGTCATTTGCGTGAACCTGTGTGACGAGCAGGGGAGGAAGATGGAAAGGATTTGGGGTTGAGTTTCAGGTCTGGGGTGA GGTTCTGAAATATGGGTTGAAGAAAATGATGTGAAGAAGATGAGTGATGAAGATGATAAGATTAAGGATAAGTGTTTTTT TTTTGGTACAAATTAAGGATAAATGTTTGATTAAGAAAATATGATTTTTGGATTTTTTTTTTAAACCTGTTATAGTGGGT CAAAATGGTTTGGTGTAACTTTACACAAGTTTTTAGATGATCATAATAAATTTTTCCGCCTTTTTTGTGCCATAAAGTTT CCTCCCACAGAATTGAACTTAGATTACCTTAATTCTTGCATCACCTTGTGTCATCAAGTGTCTTGGTCTGGGAACTTTCT GTTAGTCGGTTACATTTGTTCATTCTCATGGCTAGTGTGTGTTCTCTCCGTGTAAGCAACAAGACAAATGACCTTATAAT CTTTGTTTTCTCTGACTATATTTAGTTGGTTTAAAATCCTGCTTTTACCTTAACTTATAGAAAAA
CDS sequence (LotjaGi6g1v0322600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCCGTTTTCAAAACCCCTTTCAACGGTTACTCCGTCAAGTTCAGCCCATTTTACGAGAATCGCCTCGCCGTCGCCAC CGCCCAGAACTTCGGAATCCTCGGCAACGGCCGTCTCCACGTCCTCGACCTCTCCCCTGACCCCACCATCCCCATCTCCG AGCTCGTCGCTTACGACACCGCTGACGGCATCTACGACCTCGCCTGGTCTGAATCCCACGAATCCCTCATCGTCGCCGCC ATCGCCGACGGCTCCGTCAAGCTCTACGACCTCGCTCTCCCCCCCACCGCCAACCCCATCCGCTCCCTCCAGGAACATAC CCGCGAGGTTCACTCCGCCGATTACAACCCCGTCCGCCGTGACTCCTTCATCTCTGCTTCCTGGGATGACACCGTCAAGC TCTGGACTCTCGACCGCCCCACCTCTGTCAGAACCTTCAAGGAGCATGCCTACTGCGTCTACTCCGCCGTCTGGAACCCC CGCCACGCCGATGTATTCGCATCCGCGTCCGGCGACTGCACACTCCGCATCTGGGACGTTCGTGAACCCGGCTCCACCAT GATCCTCCCTGCTCATGAATTCGAGATTCTCGCTTGTGATTGGAACAAGTATGATGACTGTATCATTGCCACTGCGTCTG TGGATAAGTCCATCAAGGTGTGGGATGTGAGGAGTTTCAGGGTTCCTATTGCTGTGCTTAATGGGCATGGCTATGCTGTG AGGAAGGTTAGATTCTCGCCGCATGTGCGGAATTTGATGGTGTCTTGCTCTTATGATATGACTGTTTGTGCTTGGGATTT CATGGTGGAGGATGCACTTGTGAGTAGGTATGATCATCACACTGAGTTTGCTGTTGGGTTGGATATGAGTGTGCTTGTTG AGGGTCTCATGGCTAGTACTGGGTGGGATGAGCTTGTTTATGTGTGGCAGCATGGAACTGATCCTAGAGCAGCTTGA
Protein sequence (LotjaGi6g1v0322600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPVFKTPFNGYSVKFSPFYENRLAVATAQNFGILGNGRLHVLDLSPDPTIPISELVAYDTADGIYDLAWSESHESLIVAA IADGSVKLYDLALPPTANPIRSLQEHTREVHSADYNPVRRDSFISASWDDTVKLWTLDRPTSVRTFKEHAYCVYSAVWNP RHADVFASASGDCTLRIWDVREPGSTMILPAHEFEILACDWNKYDDCIIATASVDKSIKVWDVRSFRVPIAVLNGHGYAV RKVRFSPHVRNLMVSCSYDMTVCAWDFMVEDALVSRYDHHTEFAVGLDMSVLVEGLMASTGWDELVYVWQHGTDPRAA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 312 | 312 | 1.6E-158 | – | |
| Gene3D | 3 | 310 | 308 | 2.4E-84 | ||
| SUPERFAMILY | 11 | 310 | 300 | 8.4E-57 | ||
| SMART | 48 | 90 | 43 | 0.32 | ||
| ProSiteProfiles | 57 | 318 | 262 | 37.993 | ||
| CDD | 62 | 313 | 252 | 1.50983E-42 | – | |
| SMART | 96 | 136 | 41 | 3.1E-5 | ||
| Pfam | 98 | 135 | 38 | 0.14 | ||
| ProSiteProfiles | 103 | 145 | 43 | 11.544 | ||
| PRINTS | 123 | 137 | 15 | 5.1E-7 | ||
| SMART | 139 | 179 | 41 | 1.3E-7 | ||
| Pfam | 143 | 179 | 37 | 0.002 | ||
| ProSiteProfiles | 146 | 188 | 43 | 11.21 | ||
| PRINTS | 166 | 180 | 15 | 5.1E-7 | ||
| SMART | 182 | 222 | 41 | 2.8E-6 | ||
| Pfam | 187 | 222 | 36 | 5.0E-4 | ||
| ProSiteProfiles | 189 | 225 | 37 | 10.542 | ||
| ProSitePatterns | 209 | 223 | 15 | - | ||
| PRINTS | 209 | 223 | 15 | 5.1E-7 | ||
| SMART | 226 | 266 | 41 | 6.1E-6 | ||
| Pfam | 229 | 266 | 38 | 0.028 | ||
| ProSiteProfiles | 233 | 275 | 43 | 10.843 | ||
| ProSitePatterns | 253 | 267 | 15 | - | ||
| SMART | 270 | 310 | 41 | 21.0 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi6g1v0322600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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