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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0335000 |
| Transcript ID | LotjaGi6g1v0335000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Splicing factor 3B subunit 2; TAIR: AT4G21660.1 proline-rich spliceosome-associated (PSP) family protein; Swiss-Prot: sp|Q13435|SF3B2_HUMAN Splicing factor 3B subunit 2; TrEMBL-Plants: tr|A0A0B2PLT4|A0A0B2PLT4_GLYSO Splicing factor 3B subunit 2; Found in the gene: LotjaGi6g1v0335000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:64947051..64956976) extracted from Lotus japonicus Gifu genome v1.2.
CATCCCCATCGGCTCCATCTGTTCTCTCTGCACACATTCGGATTCGGATTCTCTTCCCACACACTGAAACTCCCTTCTCT TCATCCGATCCCTCAGATTTCACAAAACCCTTCAACCATGGCGGCGGAGACCCTCACCCATCAGAATGGCGTAGTCGATA ACTCTAATCCCGCCACCGCCAAAAAGTCACGGGAGAGCGAGCGACGCCGCCGCCGCCGTAAGCAGAAGAAAAACAACAAA TCATCTGAAGAATCCGAGCCTAAAACCGCTGAAGATAATGACGACGCCAAGGAAAACACTGATCCGAAGCAGGTTCGCTT CCTCTATCGATATCTTAACCTTCGATGCGTTGTTTATCATCGTACTCTCTCATTTGCCGGATTTTAATCAGTATTAATCG CTTTATCGCCGGAAATTGATTCTGAATGTCTATATCTGCGTTTTATTCAAGCAATTGATTTCGCAGTAGAAATTAGGGTT TTGGATTAGGACGTGTTAGTTAGCGAGAGAAGAATCTCTAGGGTTTAGAGAAGTGAAATTATCTATCTATTTGGATGAAG TGAAATCTATACTTTGTTTACAATGAAGTTGGTAAACTGGAATTGTTGAGTGTTTTGGGGATTTTTATTATCATTAGAGC ACAAATTGATGTCATTGTTTGTTGTAAATTGTAGGTTGTGGAACAAGTTGAAATTGAGTATGTGCCGGAGAAGGCGGAGC TAGATGAAGGCATGGATGAAGAATTTAGAAGAATCTTTGAGAAGTTCAGTTTCAGTGATGTCGCTGGTTCTGAGGTAAAT GAGTAGGTCTTTGATTGTCTGTTTCTTGTTGTTGCATATTCTTTCTTTATTGGTTGACTGAGAGTTTGCTATTGTACAAC TAGGATACTGATAAGAAGGACGAGTCAGCAGAAAATGCAGCTATTAAAAAGAAGGCTGATTCTGATTCTGATGAAGATGA AGAAGAAAACGATAACGAGCTAAAAGAGAAAGGCGGCGTCTCAAACAAGAAGAAAAAGGTGTAGTAATTTGTAACATGGT TGTTTTATTTTTTCTGCTTATCCATTTTTTTTTTACCGTTGTCTGTCTTTTGAGAACTATACTGAAAAGTTTGATTATGT GTTCAGCTTCAACGGAGGATGAAAATTGCTGAACTGAAACAAATTTGCTCAAGGCCTGATGTTGTTGAGGTATGAATCTT TCACGTAGCTTACTTGGTGTTATATATTTAGGCTTCCCCTTCTTTCTATTAGTTTGGTTTCGTGGCTATTGTCAAAATGT TAGGTAACAATTTCTTTTTCATTTTCAAGGTGTGGGATGCTACTGCATCAGACCCAAAGTTGCTGGTGTTTTTGAAATCT TATAGGAACACTGTACCTGTGCCTAGGCATTGGAGTCAGAAGAGAAAATTTTTGCAGGTTAGTCAATCCTTCTAAACTGA TAATTATGGGTTAAAGATGCGAACATGTCTGATGGTTATGTGCTGCATGAGGGATGTGGGGATAGGGTGAGGAAGATAAC GTCGATAAGGTTTCTCTTATATATATGTATGTGGTGCTTTGCAGGGGAGCGGCTGTGGCAATCAAGATTGACAAACTCGA GATATTTGAAGGGGCATATTATGTTATATAATGGGGATATATATGATATAATCATGTGCTATTTTTGCTTGATATTAATA GGCATTGGTTTATCACAAAGGTGCTAATAGTTCTGCTTTGAATTTTCAGATGCCTTTCCATAGTGCTTAATGCTCGGGCT GAATTCCTCTTAGCTTCAATTTTTCTAATGTTGATATTACTTAGCGGTCTTAGCCCTGATACATAGTCTATGTCCTTATA AAATACTTATATCTCATCAAAAGTTATGTTTTTGTTTTGGCAGGGGAAACGAGGTATTGAGAAACAGCCCTTTCAGCTTC CTGATTTCATTGCTGCCACTGGAATTGAGAAAATCAGACAGGTAGTGCTATCTATCTGTTCTCATATATATTTTTAAAAC TCATCTGTTATGAGTTATGACTCATTGTTGAAATAGTTAAATATTCTGTTATTTACTAAAGATTTATTTGCTATGTGTTA CTTGAAACTGCATTTTCTGTACTATCAGATGTTACTACTGCTTGAAATTTTTATGTGAATCACAGATTAGTGATATATGA TTTGTTTGTAAAGATCCTTCAAATATGTTTGAGAATTAAGATTGTTATCTGAGTGGAAGTCCTTGTATGTTGTATGTTTG AGAACTTTGTTATTTCTTATTTACATTTCTTGGATGGATGCATTGTCAGTTTTAATGAGCTTCATATAATCATGTAAAGT GTTGGTGGCCTGCCATGAAATCAATTTACTATCGAGTATTTATTCATTCTTAGTATGATCTATAATATCGGGGATGTTCA TGCAATCACATTATATTTGGTATTATATATACATCACCGTTCATATTCTCTGTTTCCTATGTTTGTGTGCCTATTATCCT TAAATCACTTTACCTAATTGTGTCTTTTATTTATCTTATTCTTATGTTGTCTCATGCAGGCTTATATTGAGAAAGAGGAC AGTAAAAAGTTGAAACAAAAACAAAGGGAACGCATGCAACCAAAAATGGGGAAAATGGACATAGACTATCAGGTTTCATT TGTCCATTACATCATTTGATTCCTTGCATGATTTTCTGCTTATTCAGATGTGAGGAATATTATCATATTTCCTGACAGTT ATGTTTCTGGTTGCTAGGTTCTTCATGATGCATTTTTCAAGTACCAGACAAAGCCAAAACTAACTTCTCTTGGGGAGCTG TATCATGAAGGAAAAGAATTTGAGGTATAACCATGCTTGTCTGAAGATTTGAAATACTGCAAACTTCTACAGAATGATGC TTATTTTCCTGTTGCAACATTTTTATTTTGATGTAGTATGACTATGACTATGGGGTTATGTCTTTGGACAGTATAAGAAC CTTGTTCTTGTTATTTCGGTAGGAAGTGGGTCTTCAATAAATAATAATGGAGAAATAGGCTAAACAAGTGAGTTGACTGG TATTTAGAGTTTGTGATTATTTAGGACAGAGATATCCATTTAAAGTCTCTCCTCTCTTGTCGTTAAAAGTGTATAATGTG TCTCATTATTGTGACTTGTAAGCTAAGGAAAATCATTAAATGGCTTTTGTCAATGAAATTGATTTATACCACGGATGTAT ATATACCTTGTTAGCAGTATTTTGTTTCCCCTGAGTGGGGAAAAGACTTTGGTGAGGGGGTGGTATTTTTTACCAAGTTG ATTTTGAACTTCTATAGGAATTGAATTTCTACTTCCAATGGCAGTGTTTGAGTATCTCTCTTTATAGATTATTGATCTAA GAATTGTTATTCATTCTACTTTAATGAAATGTGTTCTTTGATCTTGGTGAGACTTGAGAGTCAGAGTTCCTGGCAGCTTC ACCAGTTTATATTTGGTTTAGAATATATATATATATATATATATATATATGTATGTATGTAGAGAGAGAGGGAAGGATCT TATTGGATATAATTACATTGCTTGATGTGCAGGTTAAGTTGAGGGAGATGAAACCTGGCATGTTATCACATGAATTGAAA GAAGCTCTTGGTATGCCTGAAGGTGCCCCTCCTCCGTGGCTTATTAATATGCAGGTATATGAGTGTCTTTTGGTGGAATA TTCGTATGATTCTATTATTGGCCCTTTGACAACATTAAACACGTTTTTTGTTTTGTTTTCAGAGATACGGCCCTCCACCA TCATACCCTTCCCTGAAGATTCCTGGACTGAATGCTCCCATCCCCCCGGGAGCTAGCTTCGGTTATCATCCTGGTGGATG GGGCAAGCCTCCAGTTGATGAAGTATATTTTTTATATATCCAGTTTTTATTTCATCATTTGTTCTTTCGAATTCCCCTTT TTGTCTCATTGACCAGTTTACTTCTCTTCGTCTAAACAGTATGGACGCCCACTGTATGGAGATGTTTTCGGTGTTCAACA ACAAGATCATCCTAACTATGAGGTTTGGTTTAATCAGAAGTTCTCTGTAATTAGAATCGTAAATTCTTTTCAATATCATT TTACGAAGTTGTCTTTTTTCATCTTCAGTGTCAGACTTCAATCTTAACTTGTTTTGAAGCCTATGATACTCTCTTGTTTC TGTGCATGTCTCTAGTTTTTTTTTTTTTTTTTTTCGTTTTCTTATCAATTGTGCTTTTATATGGCATTCATTTTAGTGAT GAAAATGAGAGAAACGTAAAGGTGAAAGTGAAATTAGCATTGTATTAGGTGGTCATCTTGCATATCTAAAACCACAAATA TCTGGCCTATCACCAGTCTTCCTCATGATAGAAAGTATATTCCTTCTCTTTTTGTTCCTCTTTTTTTTTCATTCCTTCGA AAATGCAGTCCTGTGTTAGGACTCAACTTTCTGAAATAGGCCCAAGTGAGGTGTTGATTCATCATGCGGGTAATGGGCCT AAGGTTTGGAGAACTTATTCTAGAAGGGGTAAGAAAGGGAATCCTAAGTAACTGCCTAACAGAATGGTAAGAGAATGAGA GTGAGAATATGATTGTATTAACCCTGAATATAAGGATGAATCAGTGAGGTAGAGAGGTATCTTATCTTATGCTATATTGA GAGATGGGTAGGAAGCATTGGGCTTCCTATAGGAGCTAGGCTCTGGGACAGAATCGGATACCATTCCCTTCTGTATTTTT CGCTGACATTAATAAACAATCATTCCTTTGTGTTCATCCATTTATTTTCCTGCAATTGATTCTGGTTCTTATCATCCTGT CATTGATTCAACAACAATAACCAAAGCTTTTTCCTACTAGGCCGCGTCAGCTTCGTAGGTCAAATCTTGCCACGATCATG GATCATGTTTAATGAGTAGTCATAAATAAAAATAATTCCTTCCATTGATTGAAAGCCAAAATATGTTTGTGTAAGAAATA CAAAAAGGAAATTTTACTTAGGATCCCCTTACCATATTAAGTAAAAAATGGTTAATAATTTCATTATGGTATTCCTTTTT GGATTTTAATTAATATTCTCATAATGCAGGAAGAGCCAGTTGATAAGACCAAACACTGGGGTGATTTGGAGGAGGAAGAG GAAGAAGAGGAAGAAGAGGAGGAGGAGGAAGAAGACATGGAGGAGGAGGATCTTGAAGCTGGTATTCAGTCTGTTGATAG TCTCTCAAGGTATTGTTATTACAGCATTTTATTTTCTTGTTTATATAATGTGTTGGCTTAAATTACGTCTTTTGAAGTGC CTCAATTTGATTAAGAGATTGGCTTTGCTATTCTTCGTGAAAGATAAATTGCATAATCATTTTCAGATTACATGGCATGA TTGGCTGTCTTTGAGTTTTCTTGTTTTGTGTTGAGTGTCTAGTGTTAACTTCAGCTCAAAATGATGATCCTAGAGAGAAC ATTAAAATCCCAGTATTTAATCAATCAAATATCCCATTATTTACCAAAATGTAAAAAGAATAAAAAAAACCACCTCCCTA TGATGGTTAAGAATTCATAGGCTCTTAAGTGGTTGATATCCTGTTTCTTTGTCTTGGGGCTGCGGTTGGGTTATTGGGGT GCTTTTTGGGGGAGTTTTTCTAAATTCGTGGGGTGTATCTGTAGATTTTGTTTTTCATGCCTTTTTGTTATGAATTAAAA TTTTGTTTTCGAAAAATAAAGAATTAGAACGGTTCCATAGAATTGTTTATCAACATCCTGGATTTCTGTTTAGCGCAATT GATTGTTCGAGAGTCGATCTATATTTTACTGAACATTTACCATTCTTAAAGCGAATATTAGTTATTATTATTTACCACTA CAAATGCACTAAGTTCATGAATGTGAATCTCTTGCTCTACCTAATTTGGGTGTACTGGAGTAGATTGGTTGGAGGGAGGA GGGGGGTGTTGAGGTTGGTTGTATTTAGGTTTCTTACTATACCATTCTTTAACGTGTTCTCCTTTGCGTTTCTCTCTACA GCACTCCCACTGGGGTGGAGACACCTGATGTTATTGATCTTCGGAAGCAACAGAGAAAGGAGCCTGAGAGGCCTCTTTAT ACGGTGAGTCTGTTCTATTGCTGTTTTCCCTCAGCTTTAACTTCTATTTTGACTAGTTATATCAAATATCAAATATAATT TTGTTGTCATTTTCTATGCAGGTACTTGAAGAGAAGGAAGAAAAAATTGCTCCAGGAACTTTGCTTGGAACCTCGCACAC GTATGCAATACTTCCACAACTTATTGTATTTGAGTTGCATTTTTTTCGGTACAGAACTATTTGTTTCTTTACAAGTTCTG ATGTTCCTTTTTCTCCTCTCTGTAGTTACGTGGTTGGCACTGGCACCCAGGACAAGTCAGGTGCTAAAAGGGTAAGGGTT TCTCCCCTTTTATATCGCGTGAGGGTTTTTTTACTTAATGATGATATTTCTTTTAAAGGTTACATGTTTCATATTTTGTG GCTTTGACACTTTCAGGTTGATTTGCTTAGAGGACAGAAGTCAGATAAAGTGGATGTCACTTTACAGCCTGAAGAGCTGG AAGCAATGGAAAATGTTTTGCCTGCGAAGTATGATTTTTTAATAACTTCTCTGATAATTTTTAATAGCTCCTGAGTTGTA TTGTGACATTGTTGGGCAATAAATTCTTACCCAAGTTACATCTGCTTGAACTATACAGGTATGAAGAAGCAAGGGAAGAA GAGAAGATGCGCAGTCAGCGTGAAGATTTTAGTGACATGGTTGCAGAGGTGGGTTAATTCACCCTTCATATCATATGGGC ATGCTTATTAGCTGTTTTAATGTATCATTGTGTTTTGTTTTTAATTTTGTTGTTTTCTGGTCCAGAATGAGAAAAAGAGA AAAAGAAAAATGCAAGAAAAGGATGGCAAGTCGAAGAAGAAGGACTTCAAGTTTTAGGGCGCGCAGTTACTTTTTCCTTT CCTTGCAAATGGCCATTGGGGACGCGCTAACCTTTCCTCTCATGCAATTCTCTCCTTCCCATGAAAAGAGAATTTGTTTA ACTCAACTGTATTTCATTATTATTCTGAAAGTAAGCAATCACTATTTTAGGTAGGAACCTATACATGAGTAAATGATATA ATACAATGAAAACCCTAATCAGAAGAGTAGTAGGCGCTTTGGTTGAAAATTCAATGCTATTGAGTCCGTGTTAAAACTTT GCTAGTGATTGTTAAGTCTTAGTGATTATGCTGCAGCAGATAGATAACCGGCATGGATGTTTTTTGGAGCAACCAGTGTC TTAATTAGATTTGTGAAATTATTCTCACCGGTGGCCTCGGATATTTGTACTTTCCATTTTCTATTTTAATGACTGATCTA GTTTTGTACCGGAAGATCAAATCTTGTGTCACGTGAGAGATATGAGCTTACGAGCTTACGAATTGTTAGTTTTTAACTTT TCATAGCATTTCTTTTATCATTAGTTTTTATAACATTTTCAACCTAATAAAAAAATCATAACATTATCAGTACTGGTTTT TGTGACGCTTCAATACTTACTATACCTTCACTTTGTCTTGTGTTTAAAATTTTGTTATGAAAAATGGTAAAAAGTGAAAT GAACTTTAAATTTGATATGAAAAATGGTAAAAAGAGAGTCGCACAACAAACGTCAACCTTCAATTTAAGAATAAGCACTT GAGTTTATTATGTAAGCATGGATGAATATCTTAAGAGTTTAGACTAGAATCATTAATCCTAAGATATATATATATATATA TATATATATATATATATATATATATATATACTATACCCTCCCTATTCATCGCGGGTTGGTTATTTGTCAGCACGGGTTTA GCTTACGATGTATTTGGAAGTCCCCGTCCAAACGAATATTTTACAGAGAGCCGACAAGGAATTCCTTTAATAACAGGCCG TTTTGATCCTTTGGAACAACTCGATGAATTTAGTAGATCTTTTTAGGAGGCTCCAATGACCATAGATAGGACCTTTCCAA TTTTTACAGTACGATGGTTAGCTGTTCACGGACTAGCGGTACCCACCGTTTCAGCAATGCAGTTCATCCAACGATAAACC TAATCCGAATTATAGAGCTACGACACAATCAAACCCAAATGAACAAAGTGTTGAATTGAATCGTACCAGTCTTTACTGGG GGTTATTACTCATTTTTGTGCTTGCTGTTTTATTTTCAAATTATTTCTTCAATTAATAGAAAAAAGGAATAGTAAATATA TCTATTAGGAATTATCTTAAACCATTCGGAAGGATATCATTTCATAATTATCTATGACTGTTTTGTTTATGTCTAGCATA TGACTGAATACTTGATCAAATGTGGAGGAAAGTGGGATAAATGGCCGATACTACTGGAAGGATTCCTCTTTGGATAATAG GTACTGTAACTGGTATTACTGTGATCGGTTTAATTGGTATTTTTTTTATGGTTCGTATTCCGGATTGAGATCATCCCTGT AGGAATCGGATGAATTAAGTTTTCAAAAAAAAGCGTAAGAACTCAACGGGACCCACTCGAATTCTTAAAAGAAAGAGTGT ATCCCCGTTGAGTTCTTTATAATGATAATATTTTTGCTTCGTATAACATGACTCAATGGATAATCTTTTTTCCCATGTTT AAAAAAAAACTCCATTTCATTTTTTTCTAATGTTTTAAAAAATGAACTTCATTAATTGATTCAAAACACCTTATTCTTGA ATAATATCTGTTGATACTTTTTCTTTTAATTTGAAAAAAAAAAGACTAGAAAGAAGCAGAGGTATTTTCTTAATTTCTAT ACAGAGTAGAATTACATAATCCTAATTTTTGAACAAAAATGTAGTTCTTTTTACAATATTTTGAGAAATCCCCGTACCTA AAAATTCATTTCGGACAATTGAACCTTCTCAAATTGTTTCTTTTTAAGAACCAAAAAGATTTGTGCGAAAATAATAGATG CCAAGAAGAACAAGAGACCTTGGACACGTAACGGATCTTGAAGAACTATTTCTGCATCTCCCTGACCAAATCCACCCACA TTTGGATTACTTGTTAAAGGTTGATCAAGTTTGATGGATTCACCCTCTGAAACAACAAGTTCTGGTCCTGGAGGTATAAT ATCAATTACTTCACGTCCATCCGATGCATCCACTATCGTTATTTCGTACCCCCCTTATCTTTTCGTATAATTTTGTTTAT TATACCGCTCGTTGTAGCATTATAAACATTATTATTACTCTTACTCCCGTCGGGATAAATCTGACCCATTCCCCTGCCGC CTACGTATGTAGGATATTTTAAGAAATTAACATCTCTATTAGTAGCGGGATCCGGGGGAAGAATCGGAAAGGTAATCTCA CTATATTTCTGACCAGGAACAAGGCCTACCACAAGAATATTTTTTTTCGTGGGACGGTAGCTTTGAAAAGACAGATTGCC CATCTTTTCTTTAATCTCGGGCGAAATACGATAGGTGGGGGCCAATTCAAAACCCTCCGGTAAAATAAGAACAGCCCCTA CATTTAAAGCGCCCCTTTTACCATTAGCAAGAACTTGTTTTACTTGCATATCATAAGGAATTCGAACAACTGCTTCAAAT ACAGTATCGGGAAGTACCGTTTGTGGGACCTCAATATCCACGGGCTTATTGGCTAAATGGCAATTGGCACATACAATACG GCCAGTTGCTTCTCGCGGATTTTCATAACCTTGTTGGGCAAAAATCGGATATGCATTTGAAATGGGTGCTCGAATTATTA TATATATCACGAGCAATACGGAAATGGATCGAGTAATCTCTTCCTTTATATAAGAAAAAGCATTTCTAGTTTGCATGGTC CAATCATTAATTCTGATAATTTCTACAATAAAATTAGGTAGGTCACTGGCATAATTCCCTATCCATAATTCTGCTATTTA CTGAAA
CDS sequence (LotjaGi6g1v0335000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGCGGAGACCCTCACCCATCAGAATGGCGTAGTCGATAACTCTAATCCCGCCACCGCCAAAAAGTCACGGGAGAG CGAGCGACGCCGCCGCCGCCGTAAGCAGAAGAAAAACAACAAATCATCTGAAGAATCCGAGCCTAAAACCGCTGAAGATA ATGACGACGCCAAGGAAAACACTGATCCGAAGCAGGTTGTGGAACAAGTTGAAATTGAGTATGTGCCGGAGAAGGCGGAG CTAGATGAAGGCATGGATGAAGAATTTAGAAGAATCTTTGAGAAGTTCAGTTTCAGTGATGTCGCTGGTTCTGAGGATAC TGATAAGAAGGACGAGTCAGCAGAAAATGCAGCTATTAAAAAGAAGGCTGATTCTGATTCTGATGAAGATGAAGAAGAAA ACGATAACGAGCTAAAAGAGAAAGGCGGCGTCTCAAACAAGAAGAAAAAGCTTCAACGGAGGATGAAAATTGCTGAACTG AAACAAATTTGCTCAAGGCCTGATGTTGTTGAGGTGTGGGATGCTACTGCATCAGACCCAAAGTTGCTGGTGTTTTTGAA ATCTTATAGGAACACTGTACCTGTGCCTAGGCATTGGAGTCAGAAGAGAAAATTTTTGCAGGGGAAACGAGGTATTGAGA AACAGCCCTTTCAGCTTCCTGATTTCATTGCTGCCACTGGAATTGAGAAAATCAGACAGGCTTATATTGAGAAAGAGGAC AGTAAAAAGTTGAAACAAAAACAAAGGGAACGCATGCAACCAAAAATGGGGAAAATGGACATAGACTATCAGGTTCTTCA TGATGCATTTTTCAAGTACCAGACAAAGCCAAAACTAACTTCTCTTGGGGAGCTGTATCATGAAGGAAAAGAATTTGAGG TTAAGTTGAGGGAGATGAAACCTGGCATGTTATCACATGAATTGAAAGAAGCTCTTGGTATGCCTGAAGGTGCCCCTCCT CCGTGGCTTATTAATATGCAGAGATACGGCCCTCCACCATCATACCCTTCCCTGAAGATTCCTGGACTGAATGCTCCCAT CCCCCCGGGAGCTAGCTTCGGTTATCATCCTGGTGGATGGGGCAAGCCTCCAGTTGATGAATATGGACGCCCACTGTATG GAGATGTTTTCGGTGTTCAACAACAAGATCATCCTAACTATGAGGAAGAGCCAGTTGATAAGACCAAACACTGGGGTGAT TTGGAGGAGGAAGAGGAAGAAGAGGAAGAAGAGGAGGAGGAGGAAGAAGACATGGAGGAGGAGGATCTTGAAGCTGGTAT TCAGTCTGTTGATAGTCTCTCAAGCACTCCCACTGGGGTGGAGACACCTGATGTTATTGATCTTCGGAAGCAACAGAGAA AGGAGCCTGAGAGGCCTCTTTATACGGTACTTGAAGAGAAGGAAGAAAAAATTGCTCCAGGAACTTTGCTTGGAACCTCG CACACTTACGTGGTTGGCACTGGCACCCAGGACAAGTCAGGTGCTAAAAGGGTTGATTTGCTTAGAGGACAGAAGTCAGA TAAAGTGGATGTCACTTTACAGCCTGAAGAGCTGGAAGCAATGGAAAATGTTTTGCCTGCGAAGTATGAAGAAGCAAGGG AAGAAGAGAAGATGCGCAGTCAGCGTGAAGATTTTAGTGACATGGTTGCAGAGAATGAGAAAAAGAGAAAAAGAAAAATG CAAGAAAAGGATGGCAAGTCGAAGAAGAAGGACTTCAAGTTTTAG
Protein sequence (LotjaGi6g1v0335000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAAETLTHQNGVVDNSNPATAKKSRESERRRRRRKQKKNNKSSEESEPKTAEDNDDAKENTDPKQVVEQVEIEYVPEKAE LDEGMDEEFRRIFEKFSFSDVAGSEDTDKKDESAENAAIKKKADSDSDEDEEENDNELKEKGGVSNKKKKLQRRMKIAEL KQICSRPDVVEVWDATASDPKLLVFLKSYRNTVPVPRHWSQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKED SKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTSLGELYHEGKEFEVKLREMKPGMLSHELKEALGMPEGAPP PWLINMQRYGPPPSYPSLKIPGLNAPIPPGASFGYHPGGWGKPPVDEYGRPLYGDVFGVQQQDHPNYEEEPVDKTKHWGD LEEEEEEEEEEEEEEEDMEEEDLEAGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPERPLYTVLEEKEEKIAPGTLLGTS HTYVVGTGTQDKSGAKRVDLLRGQKSDKVDVTLQPEELEAMENVLPAKYEEAREEEKMRSQREDFSDMVAENEKKRKRKM QEKDGKSKKKDFKF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 86 | 86 | - | – | |
| MobiDBLite | 1 | 20 | 20 | - | – | |
| PANTHER | 19 | 574 | 556 | 1.4E-297 | – | |
| PANTHER | 19 | 574 | 556 | 1.4E-297 | – | |
| MobiDBLite | 39 | 86 | 48 | - | – | |
| MobiDBLite | 100 | 127 | 28 | - | – | |
| MobiDBLite | 100 | 151 | 52 | - | – | |
| Pfam | 166 | 291 | 126 | 2.3E-58 | ||
| SMART | 296 | 349 | 54 | 4.7E-26 | ||
| Pfam | 300 | 345 | 46 | 1.5E-21 | ||
| MobiDBLite | 384 | 461 | 78 | - | – | |
| MobiDBLite | 386 | 401 | 16 | - | – | |
| Coils | 398 | 424 | 27 | - | – | |
| MobiDBLite | 402 | 426 | 25 | - | – | |
| MobiDBLite | 446 | 461 | 16 | - | – | |
| MobiDBLite | 529 | 574 | 46 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
Expression pattern of LotjaGi6g1v0335000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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