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IPR007180

Source: InterPro

Description

IPR007180 is a Domain of unknown function DUF382.

<p>This domain is specific to the human splicing factor 3b subunit 2 and its orthologs.</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005634
Cellular component Nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
Subterm of

Associated Lotus transcripts 18

Transcript Name Description Predicted domains Domain count
Lj0g3v0020849.1
– PREDICTED: splicing factor 3B subunit 2-like [Glycine max] gi|356546253|ref|XP_003541544.1|
Domains
4
Lj0g3v0074549.1
– PREDICTED: splicing factor 3B subunit 2-like [Glycine max] gi|356546253|ref|XP_003541544.1|
Domains
5
Lj0g3v0074549.2
– PREDICTED: splicing factor 3B subunit 2-like [Glycine max] gi|356546253|ref|XP_003541544.1|
Domains
4
Lj0g3v0074549.3
– PREDICTED: splicing factor 3B subunit 2-like [Glycine max] gi|356546253|ref|XP_003541544.1|
Domains
4
Lj0g3v0093349.1
– Spliceosome associated protein-like [Arabidopsis thaliana] gi|4455274|emb|CAB36810.1|
Domains
7
Lj0g3v0093349.4
– Spliceosome associated protein-like [Arabidopsis thaliana] gi|4455274|emb|CAB36810.1|
Domains
12
Lj0g3v0332629.1
– PREDICTED: splicing factor 3B subunit 2-like [Glycine max] gi|356549367|ref|XP_003543065.1|
Domains
9
Lj1g3v1991490.1
– PREDICTED: splicing factor 3B subunit 2-like [Glycine max] gi|356546253|ref|XP_003541544.1|
Domains
9
Lj4g3v0450500.1
– PREDICTED: splicing factor 3B subunit 2-like [Glycine max] gi|356546253|ref|XP_003541544.1|
Domains
9
Lj4g3v0450500.2
– PREDICTED: splicing factor 3B subunit 2-like [Glycine max] gi|356549367|ref|XP_003543065.1|
Domains
12
Lj4g3v0450500.3
– PREDICTED: splicing factor 3B subunit 2-like [Cicer arietinum] gi|502143555|ref|XP_004505381.1|
Domains
5
Lj6g3v2044560.1
– PREDICTED: splicing factor 3B subunit 2-like [Glycine max] gi|356549367|ref|XP_003543065.1|
Domains
9
LotjaGi1g1v0395800.1
– Splicing factor 3B subunit 2; TAIR: AT4G21660.1 proline-rich spliceosome-associated (PSP) family protein; Swiss-Prot: sp|Q13435|SF3B2_HUMAN Splicing factor 3B subunit 2; TrEMBL-Plants: tr|A0A0B2PLT4|A0A0B2PLT4_GLYSO Splicing factor 3B subunit 2; Found in the gene: LotjaGi1g1v0395800
Domains
14
LotjaGi1g1v0508000.1
– Splicing factor 3B subunit 2; TAIR: AT4G21660.1 proline-rich spliceosome-associated (PSP) family protein; Swiss-Prot: sp|Q13435|SF3B2_HUMAN Splicing factor 3B subunit 2; TrEMBL-Plants: tr|A0A0L9VGH3|A0A0L9VGH3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0508000
Domains
9
LotjaGi1g1v0508100_LC.1
– Splicing factor 3B subunit 2; TAIR: AT4G21660.1 proline-rich spliceosome-associated (PSP) family protein; Swiss-Prot: sp|Q13435|SF3B2_HUMAN Splicing factor 3B subunit 2; TrEMBL-Plants: tr|G7IPR0|G7IPR0_MEDTR Splicing factor 3B subunit 2; Found in the gene: LotjaGi1g1v0508100_LC
Domains
5
LotjaGi1g1v0508100_LC.2
– Splicing factor 3B subunit 2; TAIR: AT4G21660.1 proline-rich spliceosome-associated (PSP) family protein; Swiss-Prot: sp|Q13435|SF3B2_HUMAN Splicing factor 3B subunit 2; TrEMBL-Plants: tr|G7IPR0|G7IPR0_MEDTR Splicing factor 3B subunit 2; Found in the gene: LotjaGi1g1v0508100_LC
Domains
6
LotjaGi4g1v0053200_LC.1
– Splicing factor 3B subunit 2; TAIR: AT4G21660.3 proline-rich spliceosome-associated (PSP) family protein; Swiss-Prot: sp|Q13435|SF3B2_HUMAN Splicing factor 3B subunit 2; TrEMBL-Plants: tr|A0A151T7A8|A0A151T7A8_CAJCA Splicing factor 3B subunit 2; Found in the gene: LotjaGi4g1v0053200_LC
Domains
12
LotjaGi6g1v0335000.1
– Splicing factor 3B subunit 2; TAIR: AT4G21660.1 proline-rich spliceosome-associated (PSP) family protein; Swiss-Prot: sp|Q13435|SF3B2_HUMAN Splicing factor 3B subunit 2; TrEMBL-Plants: tr|A0A0B2PLT4|A0A0B2PLT4_GLYSO Splicing factor 3B subunit 2; Found in the gene: LotjaGi6g1v0335000
Domains
9

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 5.56