Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0340000 |
| Transcript ID | LotjaGi6g1v0340000.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein kinase-like; TAIR: AT1G11390.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q02981|YP109_YEAST ABC1 family protein YPL109C, mitochondrial; TrEMBL-Plants: tr|V7BT81|V7BT81_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0340000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:65392758..65396417) extracted from Lotus japonicus Gifu genome v1.2.
GCTGACATAATTACTGTTTTGCAGATTTTTTATGCTTAGAGATATAAAGAGAGCTGCTCAGTCTGTTTGTAAAATAAGTC GAGGCATTGGCCTGCGAAGAAATGGGCCAATTGGCTCAGTTGGATCAAATATCCACCAGCGCAGGTTGTACATGCAATAT AAGTTTCCTAGTGAAGCACGTCGTTCGTTATTGTGGCACGCAACAAGGGAAAGCTTTAACAAATGCTGTTCTTTTAGGAG CTTTTCTGTAACTTCAGCTAGTAATGGAGTCTCACATCATTCTCAGATTGCTTGGAAAAGTCTATACAGAAAATATTGTT CTAGTGGTGATGGTGCATTTTCTCCCACCATAACTATGATTGCTCAGGCAGTGAGCTTGGCGTTGGCTCGTTCTTATTTG CTAGTACCTGGTATTTTTGCATTTACATGTGGAGAGCTTGCATTAGCTCAGCGGAATTGGGCAGATGTAGAGCGTTACCC GTCAGAGAATGGTCTGTATATGCGCGCACAAGATGGGTATAATTACATGTTCACATTTACGTTCATGATATTAGAAGTTC TTATCTTATTAGTGAGGGCTCTATATCTAGGAATACTATTCTCTCCAAGCATTGCGATGGCACCATTTGCAGATTATTTC GGACCTAAGTTTAGGAAAATGTGGCTCATTGTTGTTCATCGCACACTAGAAAAATCAGGTCCTGCATTCATAAAATGGGG TCAATGGGCAGCTACACGACCTGATCTTTTTCCTCGAGATCTATGCACTAAGCTCTCAGAACTTCATATGAAAGCTCCTG AGCATAGTTACAGCTACACAAAGAAATCTATAGAAAAAGCATTTGGTCGAAAAATTTCTGAAATTTTTGATAATTTTGAA GAACTGCCTGTAGCATCTGGAAGCATCGCCCAAGTGCACCGCGCTTCATTAAAATATCGTTATCCTGGTCAGCCAGCAAA ACCACTGTTGGTTGCAGTGAAAGTTAGACATCCTGGTGTAGGAGACTCAATCAGAAGAGATTTTGCTATCATTAACTTTG TGGCAAAAGTTTCGAAGTTCATTCCTGCTCTTAATTGGTTAAGATTAGATGAGAGTGTACAACAGTTTGCAGTTTTCATG ATGTCCCAAGTTGACCTTGCTAGGGAAGCTGCCCACTTGAATCGCTTTCTTTATAATTTCCGCAGATGGAAGGATGTTTC TTTCCCTAAGCCTGTCTATCCACTTGTGCACCCTGCTGTTTTGGTGGAAACATATGAAAATGGAGAAAGTGTCGCGCATT ATGTTGATGGTCTTCAAGGACATGAACATTTTAAATCTGCTCTTGCTCACATCGGGACTCATGCACTTTTGAAGATGCTT CTGGTAAAATATACCTCTGAATTGCAAAATTTTCTGCCACTGTTATCTTGTGGTTAGGGATAGTATGATTTCAGTGTTCT TATTTATGCGTTCTTTATTTATTATGTGCATTAAGGCCAGAATATTATAACCGATGACCTCTATGTAATTATACATTAAG AATATTTAACTCAAGTAACCAACAGAGTATTGAAGAAATTGTTTGCCTACATTGTGAAAATGACAAGCACAATCCTAGGA AATTTAACTAGTGTGGAACATAGGACAAATATTAGGAAATAGAGATTCTGCATATATACCTTCATGATAGGGGGGATCAG TATTAGTTTTCTTAAGAGAACTTGTATATATAATAAGCACCTATAAATTGTAAGCATGGTGAAATAAGACGTATTCCTTT GAGTTTTTATTTTACTTGGTGAAAACCATAATCTTTGTGGAGCCTAATAAATGGCTTTTGTTGACCCATGTTGCTGACTC CGTCGCTCTGAGCCTCTGACTAGTATGATGAGTCTTGGTTATTATTTTTGTTAGAGAAACTAAAACATGGTTTTACCACT TGATATTAGAACATGAGGTTTAGGTTGGGTGGTGGGTACTGAGGTCCATTAGCCCGTTTCCTATCATTCTAAATGCAAGT GTTTTATTGGAAGAGTGGTTTGGGGTGAGGGAGATTTAACCAGGTGATTGAGTGCAGTAGAAGAATGTGCTGGAGCATAT TTGTAAACTAGTTTATATGTTTTTCCTTTCTTACACTATCAGTTTTGATCTGTACAATTGTTTTGTGAAAAAATACATTG CAGTTGTTTATTGAGGGTAGGATTCAGATGGAATTTACTGACTAAAAGTTAAGTTGTAATCTCTGATGAGAAAATTAATG GTGTGGGTTCTCTTTTACCCATAATTTGTGATGGTGCTTTTATATTTTTTTATTCCAAAACATTTTTTTCAACAGTTATT GATCCAGTTTAGAAGCTGTCATTGCTGTGGGGTAAACAGGTCTTCTTAGATCTTAACAGTTTTTAGTTAATTGCTATTTG AATTTTGAGGGGTTTATTTGTCGGAACTTGGAGCTCATATAAATTGTGAGCCTTAATTAGGTGTCTAGCTGGTTTTGGAT TGTAAGTCATCATCATAATATTCTTCTATTTATTTATTCGGTTTCTTTGTAGAGAAATAATCTATGGCTTCACTTATTTT ATCTTACACACGTTGATTTTTCTTTTATCCTATAGAAAACTGTTTTTTTACTTGCTCATGTTTGATCTATTAAATATCAT ATCCCATCCTAATCGTTAATATGAAGTATACGAAGCATCATTCCTATATGTTTGAACTTGGAACATTCATGAAGTTTTAG ACACTATAATGCCTCTTTCAGGTGGACAACTTCATTCATGCAGATATGCATCCTGGAAATATCCTTGTTCGACAGGGAAA GTCTCGCAAACGGCTCTTCAAATCAAAGCCTCATGTAATTTTCCTTGATGTAGGCATGACTGCTGAACTCTCTGGCAGTG ATAGGGTAAATTTACTTGAATTTTTCAAAGCTGTTGCCCGTCGAGATGGCCGAACTGCAGCAGAATGCGCACTCAGTTTA TCAAAGCAACAGAACTGCCCAGATCCAAATGCTTTCATTGAGGTAAAATTTCCCCTAACTTTTATGCCATTCAATCAAGT ATTGTTTATTTCATCTCAAAAACTATTGTGGTTTTGTTCCTATTATGGCTTTATTTTGTGATTGCCATTGTCAAATTATA TGCCCATAAATACATCATATATAGACTGATGGGCAGTTTTTCTGTCATTTTATGACATTTGCAAGTAGTCTTGGGCCATT TTCATATTTTGTCTCATCCTTGTTTTCTAACAGGAAGTGGAAGAGGCGTTTACATTTTGGGGCACCCCGGAAGGTGACCT GGTTCATCCTGCAGATTGTATGGAGCAATTACTTGAGAAAGTTAGGCGTCACAGAGTTAATGTTGATGGCAATGTTTGTA CTGTCCTGGTGACGACCTTGGTTCTTGAGGTGATTAATTTTCTCCTGTTTACTATGTTTTACTAATAGTAATATAACATG TGATCATAAATACATGAGTTTATTGCATGGCTGATTGTTTTTTCCCCTATACAATTTCTATGTGCTGATGTGACTCGTTT GATATTGGAATAATTTGTAGGGTTGGCAGCGAAAGCTTGATCCTGGGTACAATGTGATGCAGACTTTGCAGACATTGTTA CTTAGAGCTGATTGGGCAAAGTCTCTTTCTTACACAATTGACGGACTCATGGCCCCTTGA
CDS sequence (LotjaGi6g1v0340000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTTAGAGATATAAAGAGAGCTGCTCAGTCTGTTTGTAAAATAAGTCGAGGCATTGGCCTGCGAAGAAATGGGCCAAT TGGCTCAGTTGGATCAAATATCCACCAGCGCAGGTTGTACATGCAATATAAGTTTCCTAGTGAAGCACGTCGTTCGTTAT TGTGGCACGCAACAAGGGAAAGCTTTAACAAATGCTGTTCTTTTAGGAGCTTTTCTGTAACTTCAGCTAGTAATGGAGTC TCACATCATTCTCAGATTGCTTGGAAAAGTCTATACAGAAAATATTGTTCTAGTGGTGATGGTGCATTTTCTCCCACCAT AACTATGATTGCTCAGGCAGTGAGCTTGGCGTTGGCTCGTTCTTATTTGCTAGTACCTGGTATTTTTGCATTTACATGTG GAGAGCTTGCATTAGCTCAGCGGAATTGGGCAGATGTAGAGCGTTACCCGTCAGAGAATGGTCTGTATATGCGCGCACAA GATGGGTATAATTACATGTTCACATTTACGTTCATGATATTAGAAGTTCTTATCTTATTAGTGAGGGCTCTATATCTAGG AATACTATTCTCTCCAAGCATTGCGATGGCACCATTTGCAGATTATTTCGGACCTAAGTTTAGGAAAATGTGGCTCATTG TTGTTCATCGCACACTAGAAAAATCAGGTCCTGCATTCATAAAATGGGGTCAATGGGCAGCTACACGACCTGATCTTTTT CCTCGAGATCTATGCACTAAGCTCTCAGAACTTCATATGAAAGCTCCTGAGCATAGTTACAGCTACACAAAGAAATCTAT AGAAAAAGCATTTGGTCGAAAAATTTCTGAAATTTTTGATAATTTTGAAGAACTGCCTGTAGCATCTGGAAGCATCGCCC AAGTGCACCGCGCTTCATTAAAATATCGTTATCCTGGTCAGCCAGCAAAACCACTGTTGGTTGCAGTGAAAGTTAGACAT CCTGGTGTAGGAGACTCAATCAGAAGAGATTTTGCTATCATTAACTTTGTGGCAAAAGTTTCGAAGTTCATTCCTGCTCT TAATTGGTTAAGATTAGATGAGAGTGTACAACAGTTTGCAGTTTTCATGATGTCCCAAGTTGACCTTGCTAGGGAAGCTG CCCACTTGAATCGCTTTCTTTATAATTTCCGCAGATGGAAGGATGTTTCTTTCCCTAAGCCTGTCTATCCACTTGTGCAC CCTGCTGTTTTGGTGGAAACATATGAAAATGGAGAAAGTGTCGCGCATTATGTTGATGGTCTTCAAGGACATGAACATTT TAAATCTGCTCTTGCTCACATCGGGACTCATGCACTTTTGAAGATGCTTCTGGTGGACAACTTCATTCATGCAGATATGC ATCCTGGAAATATCCTTGTTCGACAGGGAAAGTCTCGCAAACGGCTCTTCAAATCAAAGCCTCATGTAATTTTCCTTGAT GTAGGCATGACTGCTGAACTCTCTGGCAGTGATAGGGTAAATTTACTTGAATTTTTCAAAGCTGTTGCCCGTCGAGATGG CCGAACTGCAGCAGAATGCGCACTCAGTTTATCAAAGCAACAGAACTGCCCAGATCCAAATGCTTTCATTGAGGAAGTGG AAGAGGCGTTTACATTTTGGGGCACCCCGGAAGGTGACCTGGTTCATCCTGCAGATTGTATGGAGCAATTACTTGAGAAA GTTAGGCGTCACAGAGTTAATGTTGATGGCAATGTTTGTACTGTCCTGGTGACGACCTTGGTTCTTGAGGGTTGGCAGCG AAAGCTTGATCCTGGGTACAATGTGATGCAGACTTTGCAGACATTGTTACTTAGAGCTGATTGGGCAAAGTCTCTTTCTT ACACAATTGACGGACTCATGGCCCCTTGA
Protein sequence (LotjaGi6g1v0340000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLRDIKRAAQSVCKISRGIGLRRNGPIGSVGSNIHQRRLYMQYKFPSEARRSLLWHATRESFNKCCSFRSFSVTSASNGV SHHSQIAWKSLYRKYCSSGDGAFSPTITMIAQAVSLALARSYLLVPGIFAFTCGELALAQRNWADVERYPSENGLYMRAQ DGYNYMFTFTFMILEVLILLVRALYLGILFSPSIAMAPFADYFGPKFRKMWLIVVHRTLEKSGPAFIKWGQWAATRPDLF PRDLCTKLSELHMKAPEHSYSYTKKSIEKAFGRKISEIFDNFEELPVASGSIAQVHRASLKYRYPGQPAKPLLVAVKVRH PGVGDSIRRDFAIINFVAKVSKFIPALNWLRLDESVQQFAVFMMSQVDLAREAAHLNRFLYNFRRWKDVSFPKPVYPLVH PAVLVETYENGESVAHYVDGLQGHEHFKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRQGKSRKRLFKSKPHVIFLD VGMTAELSGSDRVNLLEFFKAVARRDGRTAAECALSLSKQQNCPDPNAFIEEVEEAFTFWGTPEGDLVHPADCMEQLLEK VRRHRVNVDGNVCTVLVTTLVLEGWQRKLDPGYNVMQTLQTLLLRADWAKSLSYTIDGLMAP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 622 | 622 | 0.0 | – | |
| PANTHER | 1 | 622 | 622 | 0.0 | – | |
| Phobius | 1 | 164 | 164 | - | – | |
| Phobius | 165 | 190 | 26 | - | – | |
| TMHMM | 167 | 189 | 23 | - | – | |
| Phobius | 191 | 622 | 432 | - | – | |
| CDD | 250 | 540 | 291 | 4.5234E-151 | – | |
| SUPERFAMILY | 259 | 482 | 224 | 1.79E-13 | ||
| Pfam | 270 | 394 | 125 | 2.0E-31 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0340000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…