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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0341200 |
| Transcript ID | LotjaGi6g1v0341200.1 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Equilibrative nucleoside transporter family protein; TAIR: AT4G05120.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q9M0Y3|ENT3_ARATH Equilibrative nucleotide transporter 3; TrEMBL-Plants: tr|A0A072V578|A0A072V578_MEDTR Equilibrative nucleoside transporter 6; Found in the gene: LotjaGi6g1v0341200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:65497368..65501125) extracted from Lotus japonicus Gifu genome v1.2.
AAAAGAAAACTTAAAATATTTGGCATTGCTCTCTTGAGCTTTCCTCATGGCCTTCATAAAGGAACAAATTTATTGGTCAA CTTGTCAATTATTTAACCGACTCTATGTTAAATTGTCAATGTCATCATAATGATTATTGACAATTTAATATGAATTAGAA GCCATTAAGCCAATGATAAAGGACAAATGAAGAAACCAGATCTGTGCTTAACCATTTTCATATTACGAGGTTGCCGGTTC AAGAGGTGCACATCATCAGTAGAACACAAACATATCATTATCACCGCCATTACTATCTTCAAATGGAAATGAAATGTCAC ATAATCAATTCTCTAGACCTCATTTGTCATCGTTCTCCTTGATTTATCTGCCATGGCAACAAACAATAGGTGAAGTTCTT TACTATTTTGTTTCTATTTTCCATCCTACATCTTGTATTTTCCCTTATGATTATTGATATGAAATAGATAAAATGAAGGT GCTTAGTTCAATGATATTAGGGGTTTCCTATCATTGTCTTCAATTAGCACTAGATTTTTCCATTATTTTACCTTAGTGAT GTTTGGTTGTAGCACTTTCCAGCAGGAGATATCTCATAAACTGAACCACTTTTGAGTTTCTCTTTTGTGTCATTTATTCG TATACTTCAACATTATTTGTACTTGTGATGTTGCTCTGGCTCCATCACTTAATGCATGTTTGGAAACTCGATCGAAAATC ACATGTAAAGCAAAACCATGTTGGACAGAAGCAAAAACTAACGGAAGTTGCTTCTGTCCACCATGAGTGAATGAGTTTCC AAACATTCACTAAATATTTCTAGAATTAATTTTGACACCAAAAAGCTACGACTGTGCTTTTTCCCATAAATGAGTTTGAG TGTAGATGAATTTCTAAACATGTACTTAATTGTTTCTTATTGTAATGGTTTCTTTTGTGAGTGAGAATGAGATGGTCATG TTTACTACAAATGGCAGTGGAGCAACAAGAAAGCCTGAGGTAAGTGTCCTGTTTTATATTCCTTGGAGAATAGGTTACTA GGATTTCTCAGGAACAAAGTTTGTTAACTTGCCTGTGTGTTTTCAATAGGGAAAGTACAAAGCAATGGTAGTTTGTTTCA TTCTTGGACTAGGATCCCTTGTTTCATGGAACAGCATGCTGACTATAGCAGATTACTATTACAAATTGTTCCCCGTAAGT AAGTCACGGTGCTTTTAGTTTCTTTTATAAGACTTGACATCATCCTACAAAGATTGATTCTTAGGAATAAGTGCAATTCA GTAACTGATTAGAAGCTTTCTTTTCATTTGAAGAAATATCATCCTTCAAGGGTACTAACCCTGGTTTATCAACCATTTGC ACTTGTAACAATGTTAATACTGGCATATTATGAGTCAAGGATCAATACTAGAATGCGGAATTTGGCTGGATTCACACTTT TCTTTGCTAGCACTTTCTTGGTTCTTGTTGTAAGTACACCATTTCAAATTCCATAATTTGCATTATCTGATTTTCTTAAA TTCATGTATGACCTATTTTCTTTGGCTTATATGGAGCTTGAACAATCTGTCGTGACAGTTGGACCTAGCAACATCAGGGA AAGGTGGAATTGAACCTTATATTGGTATATGTGTGCTAGCTGCTTGTTTTGGAATAGCAGATGCTCATGTGGAAGGTGGC ATGATAGGAGACCTGTATTTTATGTGCCCTGAGTTTATCCAGGTTGGTCTTTCATTTAATTTATTCAATATTTTAACATT ACCCTTGTCAGTTATAATTCCTTCAAAAAATATATATATTTGGAGAAGGGGTTGCACTTGCTGCTATTTTTTTTGCCTAA ATTGTTAAGTGTATGCAGTCCTACCTTGCTGGTTTGGCAGCATCAGGGGCTCTAACTTCTCTTCTGAGAATTCTGACCAA GTTAGCTTTTGAGAAATCTCATAATGGACTTCGCAAGGGAGCTAGTATGTTATTCTTCTTTTACAATGCTCATATATATT GGTTTCTTATATTTGTCTTCTCTTGATGAATTGATTTTGTTTGAGATAGTGTATGTTTGGGAATGAGTCTGGTCACCACG TTTTCTATCCAGATCCACGTCTAGCGGAAGCAAATAATATGTACAGTTTGCCCCAACGTGCATTGGATGATTGGAGTGTG TGCATGACTCATTTCCAAACATAGTTGTTTTCTAGTTAAAACTTTTGTAGGATGTATAATGATTATGACATTCTATCTTC TCAAATCAGTATAATGGTCCCTAACTCCATATTGCTCTAGAATTTTATTGATTGCTTTTGTTATTTTTGCAGTACTATTC TTTGCAATCTCCACACTCATCGAGTTTCTTTGTATAATCCTATATGCAATATACTTCACCAAATTGCCTATAGTGAAATA TTACCGTTCAAAAGCAGCCTCAGAGGGATCAAAAACAGTTTCAGCTGACCTAGCTGCTGCTGGCATTCAAACACAGACTA ATGAAGTAACATAAATATGCAAGAACATAAATACATTACTCCTACATGTAATATCTTTATTATGTTCTAAAAAATTGGAA TTTTTGTAGGGTGGATATGATAACAAACAAGAAGAACGGTTGAGCAACAAACAGTTGTTTCTTGAGAACCTTGATTATGC AGCTGGAATATTTCTTATATATGTAGCAACTCTGTCAATCTTCCCTGGGTTCTTGTATGAAAACACTGGGTCACATCAGC TAGGCACATGGTAAGTGCTTATTTATGCTTTGTCTTCTCAATTCAACTGTCTTGTGACATTACATGATATACATCATTTT AATTTGTTTTGTTAACGTAATTTAATTATAATGTTTACATGATATACCTGACCATGGCCTTCAGAAAAAAATTTACTAGG TCCTTTGATATGTGTTTTCTGTTATGTTCCTTTGATGACTGATGAAATTGATTGGGAAACATAAGTTTATATGTTGTTAC TATTTATCTTTTTAGGTACCCAATTGTTTTGATTGCTATGTATAATGTTGTGGATTTCATAGCAAGATACATTCCCCTTG TGCAAAGTCTGAAGTTGGAATCCAGAAAGGGTCTACTAATAGCAATCCTGTCTCGATTCTTGCTGATTCCAGCATTCTAC TTTACAGCAAAATATGGTGACCAAGGATGGATGATCCTCCTCACCTCCTTCTTGGGACTTACCAATGGCTATCTAACTGT ATGTGTTCTTACCGTGGCACCAAGAGGTTACAAGGCAAGTGTACACAACCCACAATTCATAAGTACATGGATCTTAAACT AATGGGTTTTGTCCACTTACATTAGTTATTTACTTAATGGTGAAACTAGGACTGAAAAGATATTAATGATCATTTTTTCT CATTTTCATCATTAAAATAGTTTGTTCAATTGATTTACATGTCATGAGTTAACTCTAAATTATGAACTAATTTTATATTT TGTGTTGTTGCAGTCTCCTGAGCAGAATGCTTTGGGCAATTTGCTTGTGGCGTGTCTTTTAAGTGGCATATTTGTTGGGG TTTGTCTTGACTGGTTATGGCTCATAGGTAAAGGATCATTCTAAAAATACATTTGAAGTCACATTGTTACTGATAAATCT TTGGCGTATTCGCATGCCCTGTAATTTGAATATTCCTAAATCAATACACACCATACTCTGATACATATTCATTTTACTAA CTATATTTCATGAGAATGGTGCACATTAACCTTATGAAAGATATATATGAGAGGGTCTTCCTTCATGCTCACATAAAG
CDS sequence (LotjaGi6g1v0341200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAACAAACAATAGTGGAGCAACAAGAAAGCCTGAGGGAAAGTACAAAGCAATGGTAGTTTGTTTCATTCTTGGACT AGGATCCCTTGTTTCATGGAACAGCATGCTGACTATAGCAGATTACTATTACAAATTGTTCCCCAAATATCATCCTTCAA GGGTACTAACCCTGGTTTATCAACCATTTGCACTTGTAACAATGTTAATACTGGCATATTATGAGTCAAGGATCAATACT AGAATGCGGAATTTGGCTGGATTCACACTTTTCTTTGCTAGCACTTTCTTGGTTCTTGTTTTGGACCTAGCAACATCAGG GAAAGGTGGAATTGAACCTTATATTGGTATATGTGTGCTAGCTGCTTGTTTTGGAATAGCAGATGCTCATGTGGAAGGTG GCATGATAGGAGACCTGTATTTTATGTGCCCTGAGTTTATCCAGTCCTACCTTGCTGGTTTGGCAGCATCAGGGGCTCTA ACTTCTCTTCTGAGAATTCTGACCAAGTTAGCTTTTGAGAAATCTCATAATGGACTTCGCAAGGGAGCTATACTATTCTT TGCAATCTCCACACTCATCGAGTTTCTTTGTATAATCCTATATGCAATATACTTCACCAAATTGCCTATAGTGAAATATT ACCGTTCAAAAGCAGCCTCAGAGGGATCAAAAACAGTTTCAGCTGACCTAGCTGCTGCTGGCATTCAAACACAGACTAAT GAAGGTGGATATGATAACAAACAAGAAGAACGGTTGAGCAACAAACAGTTGTTTCTTGAGAACCTTGATTATGCAGCTGG AATATTTCTTATATATGTAGCAACTCTGTCAATCTTCCCTGGGTTCTTGTATGAAAACACTGGGTCACATCAGCTAGGCA CATGGTACCCAATTGTTTTGATTGCTATGTATAATGTTGTGGATTTCATAGCAAGATACATTCCCCTTGTGCAAAGTCTG AAGTTGGAATCCAGAAAGGGTCTACTAATAGCAATCCTGTCTCGATTCTTGCTGATTCCAGCATTCTACTTTACAGCAAA ATATGGTGACCAAGGATGGATGATCCTCCTCACCTCCTTCTTGGGACTTACCAATGGCTATCTAACTGTATGTGTTCTTA CCGTGGCACCAAGAGGTTACAAGTCTCCTGAGCAGAATGCTTTGGGCAATTTGCTTGTGGCGTGTCTTTTAAGTGGCATA TTTGTTGGGGTTTGTCTTGACTGGTTATGGCTCATAGGTAAAGGATCATTCTAA
Protein sequence (LotjaGi6g1v0341200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATNNSGATRKPEGKYKAMVVCFILGLGSLVSWNSMLTIADYYYKLFPKYHPSRVLTLVYQPFALVTMLILAYYESRINT RMRNLAGFTLFFASTFLVLVLDLATSGKGGIEPYIGICVLAACFGIADAHVEGGMIGDLYFMCPEFIQSYLAGLAASGAL TSLLRILTKLAFEKSHNGLRKGAILFFAISTLIEFLCIILYAIYFTKLPIVKYYRSKAASEGSKTVSADLAAAGIQTQTN EGGYDNKQEERLSNKQLFLENLDYAAGIFLIYVATLSIFPGFLYENTGSHQLGTWYPIVLIAMYNVVDFIARYIPLVQSL KLESRKGLLIAILSRFLLIPAFYFTAKYGDQGWMILLTSFLGLTNGYLTVCVLTVAPRGYKSPEQNALGNLLVACLLSGI FVGVCLDWLWLIGKGSF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | - | – | |
| PANTHER | 4 | 414 | 411 | 7.1E-228 | – | |
| PIRSF | 4 | 414 | 411 | 1.6E-81 | ||
| PANTHER | 4 | 414 | 411 | 7.1E-228 | ||
| SUPERFAMILY | 15 | 403 | 389 | 2.88E-5 | ||
| Phobius | 20 | 43 | 24 | - | – | |
| TMHMM | 21 | 40 | 20 | - | – | |
| Phobius | 44 | 54 | 11 | - | – | |
| TMHMM | 55 | 74 | 20 | - | – | |
| Phobius | 55 | 73 | 19 | - | – | |
| Phobius | 74 | 84 | 11 | - | – | |
| Phobius | 85 | 105 | 21 | - | – | |
| TMHMM | 87 | 106 | 20 | - | – | |
| Phobius | 106 | 110 | 5 | - | – | |
| Phobius | 111 | 129 | 19 | - | – | |
| TMHMM | 111 | 133 | 23 | - | – | |
| Pfam | 124 | 410 | 287 | 5.8E-33 | ||
| Phobius | 130 | 149 | 20 | - | – | |
| TMHMM | 146 | 168 | 23 | - | – | |
| Phobius | 150 | 172 | 23 | - | – | |
| Phobius | 173 | 183 | 11 | - | – | |
| TMHMM | 183 | 205 | 23 | - | – | |
| Phobius | 184 | 205 | 22 | - | – | |
| Phobius | 206 | 263 | 58 | - | – | |
| TMHMM | 257 | 279 | 23 | - | – | |
| Phobius | 264 | 283 | 20 | - | – | |
| Phobius | 284 | 294 | 11 | - | – | |
| TMHMM | 294 | 316 | 23 | - | – | |
| Phobius | 295 | 315 | 21 | - | – | |
| Phobius | 316 | 326 | 11 | - | – | |
| Phobius | 327 | 346 | 20 | - | – | |
| TMHMM | 328 | 345 | 18 | - | – | |
| Phobius | 347 | 351 | 5 | - | – | |
| Phobius | 352 | 376 | 25 | - | – | |
| TMHMM | 355 | 377 | 23 | - | – | |
| Phobius | 377 | 387 | 11 | - | – | |
| Phobius | 388 | 411 | 24 | - | – | |
| TMHMM | 390 | 412 | 23 | - | – | |
| Phobius | 412 | 417 | 6 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleoside transmembrane transporter activity | Enables the transfer of a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide) from one side of a membrane to the other. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Nucleoside transmembrane transport | The directed movement of nucleoside across a membrane. |
Expression pattern of LotjaGi6g1v0341200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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