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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0343500 |
| Transcript ID | LotjaGi6g1v0343500.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein kinase; TAIR: AT1G65790.1 receptor kinase 1; Swiss-Prot: sp|Q39086|SD17_ARATH Receptor-like serine/threonine-protein kinase SD1-7; TrEMBL-Plants: tr|K7M1S0|K7M1S0_SOYBN Serine/threonine-protein kinase; Found in the gene: LotjaGi6g1v0343500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:65640078..65641984) extracted from Lotus japonicus Gifu genome v1.2.
CTGTAAGCAGCCAAAGAGGCAAATATTCAATTTAGTGTTGGAAGAGCTAGGAGCAAGAGGAATGAGTTTGAACTTCCAGT ATTTGAGATTGCCATTATTGAAGCAGCTACAGGGCATTTCTCTGTTTACAATAAGATTGGAGAAGGTGGATTTGGTCCTG TATACAAAGTAAATTACTCTTTCTCTGTGATTAATATTGAATAAAATGATATTCGAAACAATGCCACATAGTAGTCTTTG ACAATTGTCCTCCAGATTGCATCACAAGAAAACTTTTTAGCTTAATTCTATTTTTAACACACTTCTAAATAATTCAGACA ATGAACTCTATCATTCTTTTAATCTGAATGAATTGGATATTTAATATAATATATTGTCATCTTCAAGTAGTTAATTAGTT GATCAGTCCAAGGAGACAGTAAAACTTTCTACTTACTTATTAAACAAGTTTATCAGTTTACCAACCTGGTTCCATTTTCC AACAAAAAAAGTTACTTACCCTCTTAGTTTTGCAACAAGGATGATTATATTTGGGATCTGTTGGAATTTCAGGGTCAACT TCCATCAGGACAGGAAATAGCGGTGAAAAGGCTTTCAGAAAGTTCTGGACAAGGCCTGCAGGAGTTCAAGAATGAGGTTG TTTTGATCTCCCAACTTCACCATAGAAACCTTGTCAAGCTTCTGGGTTGTTGCATTCAGGGAGAAGATAAAATGTTGGTC TATGAGTACATGCCAAACAGAAGCTTGGACTCCTTCTTATTTGGTTGGTCTCTCAACTATTCCACAATCACATCTACATG TTAAACAATGTTTGAACTTTGAACAAATTAACATGTTTCACTTAACCATAGTATACTGTATAACTAGTTGATGTCTGAAT CAGATGAAACCAAGCGTTCTGTGCTTAGTTGGCAAAAGAGGAAAGACATTATAATTGGCATTGCTCGCGGAATTCTGTAC CTTCACAGAGATTCAAGACTAAGAGTAGTCCATAGAGACCTGAAAGCAAGCAATGTTCTCTTGGACAGTGAAATGAACCC AAAAATTTCTGACTTTGGAATGGCAAGAATGTTTGGTGGAGATCAAACTGAAGCAAAGACCAAGACAGTAGTAGGAACCT AGTAAGCACAAAGATAAATAGCCTAAACTTTCCACAATTTTGTGATCTTAAACTCATTTTATGTTTCGAAATTATCACAG TGGATACATGCCCCCAGAGTATGCAATGGATGGCCGCTTCTCTTTCAAATCTGATGTTTTTAGCTTTGGAGTTTTACTCT TGGAGGTGTTGAGTGGCAAGAAAAACAAAGGATTTCTTCACCCAGATCACAAATTGAATCTCCTAGGCCATGTGAGTATA TATAAATATATAATAGTGAATAAGTATCATTTTTTATAGTATCTGATATATAATCAATTTGCAAATTGTAATCACATTAA ATGAATAACTTGGTAGGGATGGAAGCTTTGGAATGAAAGAAGGGCTTTGGAGCTGATGGATCCAATGGTTGAGAATGAGG TCCCTTCCTCTGAAGCTCTAAGGTGTATTCAAGTGGGCCTTTTATGTGTTCAACAGCATCCAGAAGATAGGCCAACAATG TCATCAGTGTTGTTGATGTTGGACAGTGAGAGTGTGTTGCTTCCCCAACCTAGAAGGCCAGGATTATATTCTGAGAGATT TTTCTTAGAGACAGATTCATCATCACGTGATAGACTGAATTCTGCTTCCAATGACATAACTGCTACCATAGAAGAGGGTC GTTAGGAACTTGCCTCTGAAATTAGCCTAAATTAATAGGCATGAAATTCAGCATTATTGTTTGTTTGTACTCCCTTCAAT CAAATAATGCAGAAGCAAGGGAGTAGTATGATATTGCCAACTATATTGAAGTATTAGTATCTTCTTC
CDS sequence (LotjaGi6g1v0343500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTGGTCTATGAGTACATGCCAAACAGAAGCTTGGACTCCTTCTTATTTGATGAAACCAAGCGTTCTGTGCTTAGTTG GCAAAAGAGGAAAGACATTATAATTGGCATTGCTCGCGGAATTCTGTACCTTCACAGAGATTCAAGACTAAGAGTAGTCC ATAGAGACCTGAAAGCAAGCAATGTTCTCTTGGACAGTGAAATGAACCCAAAAATTTCTGACTTTGGAATGGCAAGAATG TTTGGTGGAGATCAAACTGAAGCAAAGACCAAGACAGTAGTAGGAACCTATGGATACATGCCCCCAGAGTATGCAATGGA TGGCCGCTTCTCTTTCAAATCTGATGTTTTTAGCTTTGGAGTTTTACTCTTGGAGGTGTTGAGTGGCAAGAAAAACAAAG GATTTCTTCACCCAGATCACAAATTGAATCTCCTAGGCCATGGATGGAAGCTTTGGAATGAAAGAAGGGCTTTGGAGCTG ATGGATCCAATGGTTGAGAATGAGGTCCCTTCCTCTGAAGCTCTAAGGTGTATTCAAGTGGGCCTTTTATGTGTTCAACA GCATCCAGAAGATAGGCCAACAATGTCATCAGTGTTGTTGATGTTGGACAGTGAGAGTGTGTTGCTTCCCCAACCTAGAA GGCCAGGATTATATTCTGAGAGATTTTTCTTAGAGACAGATTCATCATCACGTGATAGACTGAATTCTGCTTCCAATGAC ATAACTGCTACCATAGAAGAGGGTCGTTAG
Protein sequence (LotjaGi6g1v0343500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLVYEYMPNRSLDSFLFDETKRSVLSWQKRKDIIIGIARGILYLHRDSRLRVVHRDLKASNVLLDSEMNPKISDFGMARM FGGDQTEAKTKTVVGTYGYMPPEYAMDGRFSFKSDVFSFGVLLLEVLSGKKNKGFLHPDHKLNLLGHGWKLWNERRALEL MDPMVENEVPSSEALRCIQVGLLCVQQHPEDRPTMSSVLLMLDSESVLLPQPRRPGLYSERFFLETDSSSRDRLNSASND ITATIEEGR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 240 | 240 | 1.9E-94 | – | |
| PANTHER | 1 | 240 | 240 | 1.9E-94 | – | |
| ProSiteProfiles | 1 | 208 | 208 | 29.163 | ||
| Pfam | 1 | 199 | 199 | 2.3E-33 | ||
| SUPERFAMILY | 1 | 221 | 221 | 8.9E-59 | ||
| SMART | 2 | 209 | 208 | 1.1E-8 | ||
| Gene3D | 7 | 208 | 202 | 6.6E-62 | – | |
| ProSitePatterns | 52 | 64 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi6g1v0343500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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