Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0347200 |
| Transcript ID | LotjaGi6g1v0347200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Octicosapeptide/Phox/Bem1p domain-containing protein; TAIR: AT5G09620.2 Octicosapeptide/Phox/Bem1p family protein; Swiss-Prot: sp|Q8WZ42|TITIN_HUMAN Titin; TrEMBL-Plants: tr|A0A151S167|A0A151S167_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0347200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:66007359..66009788) extracted from Lotus japonicus Gifu genome v1.2.
TAAGGGTGAATCAAATCAAATTTTATTCCTTATGAAAAGTCCTAAACATGGGAAAAAAATATCTGTAAAAAAGGTAATTA AGAGTATAAAACCAAAAACAAAGACGTCCCTCACAAAAAGTCTCCTATCCTATGATTCCGTATCTCTCTCAATCACCATT CATCATCGCACTCTCACGCAGTGTTCGTGAATTCTGAAATGGAGAACTATGCTCCTGCATACCCACCATCATACCCAGAT TCCGGTGAATCCTCTCCACGTTCACGAGAGATCGACTTCGAAAACCCACCACCATGGGATGATCAAAACTACAAGGTCAA GTTCATGTGCAGTTACGGCGGCAAGATCCAGCCACGCACACACGATAATCAGCTTTCCTACGTCGGCGGCGACACCAAGA TCCTCGCCGTCGATCGCAACATCAAGTTCCCTGCGCTTCTCTCCAAGCTCTCCGCTCTCTGCAACAACTGCGACAACCCC GCCGACCTCACCTTCAAGTACCAACTCCCTGGCGAGGACCTCGACGCTCTCATCTCCGTCACCAACGACGATGATCTTGA TCACATGATGCACGAGTACGATCGCCTCTACCGCGCTTCTGCTAGACCTTCTCGTATGCGGCTCTTCCTCTTTCTCCCTG AGAATCCTCTTCCCTCTGCTCTCGCACCCGCACACGCACCAGCACCGGTTTCCGATCAACCCGACCCGGTAAAGCCCAAC AACGTCGATTTCCTCTTCGGTCTCGACAAGCCGGTTGCTGCTCCTCCTCCGCTTCAGCCACCGCCACTCGCCGCGGCTAA TCCGGTGCCGCCACCTGTGGCGGTGCCCCCTCCAGAGTACCACCAGCCGCGACCAAATTCTGATCGGGTCATGGGTTCGG ATCCGGGTGTAAACCATCATATCGAGATCCAGAGGCAGTTGCAGCGGTTACAGGTTGCGGAGAGCGAGCAAGGTCCGTAT CGGAGGAGAAGCGAGGATAATCATAACCCCACCCCCGCCGGGAACTACGATTACTACGCTCAGAAGGCGCCGGAGAAGTT GCCAGCGTCTAATTTCCCGGTGAGCGCGCCGCCGCCGAATCAAGCTGGTTATTGGCAGCAGGAGAAGGCTGTTTCCGGCG AGGTTTATCACTCCGGAGGAGGGGACCAGCCGGTGTACATGATTCCGGGAACGGGAACGTTCTATCACGCGCCGATGGTG CGTCCGCCGGTGTCGCAAGGCTACTACGCGATGCCACGATTGCCTTCTGATGTTTACCGTGAGCAGCAACCGGTGTACGG CGGCGTTCCGCCGCCTAAAGCGCCGCACTCGTCGGCGGTGCCGGTGACTTATCCACCGGCGCAGCCAGTTAAAGCTCCCG CGTATACAGAAGGAGTCAGCGTGGTTCGACAAGCTGGGTTACCGGATAATACGGCAGGTGCGTACGCACAGGTGGCGTAT GATAGTGCCACTGGGAGACATGTTTACTATACTGCCCCGGGAGGTGTTGTGCACGCTCCGCCGTACCAAGGAGTTGCTCC GCCAGGCTCCACTGATCTGAGACCACCGGGCATGTCATTGGGTCAAGATGTTAAAGTTATAAACAAGGTTTCTCAAGGTT CAGTGTGATTAAAATTGTGGTTTGCATTAAATTTGAAATATTATCATGTTATTAAGGTGCGGTGTTCTTACTCTTTATTT GCACTTGCTATTGCTGTAAACAATGTGAGTTATGATTATACTATTTCTATGACTATGTTTACATTTCTTTGTGACACTAA TTTGTGTGTTAATAGTGTTTTTTTTTTTTTTATCTTAATTGAGTAGACATGCTACAAAGAGGAATTTCTTTTCGATTTCA ATATATTCTTTGGTCGGTCTTTCGTACAACTTAGTGTGTTGAGTGAAGTGATTAGCAGAAATTTATTCTTAAATATGAGC GCTAAATAATTTTTTTAATAAGTGTTATTTACCAACTAAAATTTTAATTACATCAAGGAATTTGAATCTTCCTCTATCAG ATGATCAAAATTGAAAAAGTTACATCTAAACATAAGTGTATCAATGTGTGAAAAATAATTAAAAGCTTCTGCCATGGTAA CCAAAGAAGTTGATAAAAAAATTACAAGTTTTACAAGTCTTTGAGTTTGCATCAAAAGTGATACAAGGAAACAAAAGTTT AGCAATCAACCAACCTAAGATATTAGAGCATCTCCAATGGTAGGAACTTATTTTGGGACTTAACTCAATTTTTGTGGGCC CAAATTGCCACATAGGATTTAAGACACCCATAAGGTCTTCATGCATATTTCACTCTAGTGGTTGGGATATTATTTTACTT TTGACAGGACCCACAGTACCCAATATATTTATATTATTTATTTCTCTCCCTAATTTTCACTTTGGTTATGGTATTGAAGG AGAGAGAAAAAAATATTATTTTATTTAAGA
CDS sequence (LotjaGi6g1v0347200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAACTATGCTCCTGCATACCCACCATCATACCCAGATTCCGGTGAATCCTCTCCACGTTCACGAGAGATCGACTT CGAAAACCCACCACCATGGGATGATCAAAACTACAAGGTCAAGTTCATGTGCAGTTACGGCGGCAAGATCCAGCCACGCA CACACGATAATCAGCTTTCCTACGTCGGCGGCGACACCAAGATCCTCGCCGTCGATCGCAACATCAAGTTCCCTGCGCTT CTCTCCAAGCTCTCCGCTCTCTGCAACAACTGCGACAACCCCGCCGACCTCACCTTCAAGTACCAACTCCCTGGCGAGGA CCTCGACGCTCTCATCTCCGTCACCAACGACGATGATCTTGATCACATGATGCACGAGTACGATCGCCTCTACCGCGCTT CTGCTAGACCTTCTCGTATGCGGCTCTTCCTCTTTCTCCCTGAGAATCCTCTTCCCTCTGCTCTCGCACCCGCACACGCA CCAGCACCGGTTTCCGATCAACCCGACCCGGTAAAGCCCAACAACGTCGATTTCCTCTTCGGTCTCGACAAGCCGGTTGC TGCTCCTCCTCCGCTTCAGCCACCGCCACTCGCCGCGGCTAATCCGGTGCCGCCACCTGTGGCGGTGCCCCCTCCAGAGT ACCACCAGCCGCGACCAAATTCTGATCGGGTCATGGGTTCGGATCCGGGTGTAAACCATCATATCGAGATCCAGAGGCAG TTGCAGCGGTTACAGGTTGCGGAGAGCGAGCAAGGTCCGTATCGGAGGAGAAGCGAGGATAATCATAACCCCACCCCCGC CGGGAACTACGATTACTACGCTCAGAAGGCGCCGGAGAAGTTGCCAGCGTCTAATTTCCCGGTGAGCGCGCCGCCGCCGA ATCAAGCTGGTTATTGGCAGCAGGAGAAGGCTGTTTCCGGCGAGGTTTATCACTCCGGAGGAGGGGACCAGCCGGTGTAC ATGATTCCGGGAACGGGAACGTTCTATCACGCGCCGATGGTGCGTCCGCCGGTGTCGCAAGGCTACTACGCGATGCCACG ATTGCCTTCTGATGTTTACCGTGAGCAGCAACCGGTGTACGGCGGCGTTCCGCCGCCTAAAGCGCCGCACTCGTCGGCGG TGCCGGTGACTTATCCACCGGCGCAGCCAGTTAAAGCTCCCGCGTATACAGAAGGAGTCAGCGTGGTTCGACAAGCTGGG TTACCGGATAATACGGCAGGTGCGTACGCACAGGTGGCGTATGATAGTGCCACTGGGAGACATGTTTACTATACTGCCCC GGGAGGTGTTGTGCACGCTCCGCCGTACCAAGGAGTTGCTCCGCCAGGCTCCACTGATCTGAGACCACCGGGCATGTCAT TGGGTCAAGATGTTAAAGTTATAAACAAGGTTTCTCAAGGTTCAGTGTGA
Protein sequence (LotjaGi6g1v0347200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MENYAPAYPPSYPDSGESSPRSREIDFENPPPWDDQNYKVKFMCSYGGKIQPRTHDNQLSYVGGDTKILAVDRNIKFPAL LSKLSALCNNCDNPADLTFKYQLPGEDLDALISVTNDDDLDHMMHEYDRLYRASARPSRMRLFLFLPENPLPSALAPAHA PAPVSDQPDPVKPNNVDFLFGLDKPVAAPPPLQPPPLAAANPVPPPVAVPPPEYHQPRPNSDRVMGSDPGVNHHIEIQRQ LQRLQVAESEQGPYRRRSEDNHNPTPAGNYDYYAQKAPEKLPASNFPVSAPPPNQAGYWQQEKAVSGEVYHSGGGDQPVY MIPGTGTFYHAPMVRPPVSQGYYAMPRLPSDVYREQQPVYGGVPPPKAPHSSAVPVTYPPAQPVKAPAYTEGVSVVRQAG LPDNTAGAYAQVAYDSATGRHVYYTAPGGVVHAPPYQGVAPPGSTDLRPPGMSLGQDVKVINKVSQGSV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 33 | 33 | - | – | |
| PANTHER | 12 | 469 | 458 | 3.8E-156 | – | |
| PANTHER | 12 | 469 | 458 | 3.8E-156 | – | |
| CDD | 43 | 145 | 103 | 3.68984E-50 | – | |
| SMART | 54 | 147 | 94 | 2.9E-32 | ||
| Pfam | 55 | 145 | 91 | 1.6E-18 | ||
| SUPERFAMILY | 55 | 150 | 96 | 1.13E-21 | – | |
| Gene3D | 60 | 146 | 87 | 1.1E-7 | – | |
| MobiDBLite | 157 | 230 | 74 | - | – | |
| MobiDBLite | 187 | 217 | 31 | - | – | |
| MobiDBLite | 245 | 269 | 25 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi6g1v0347200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…