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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0347600 |
| Transcript ID | LotjaGi6g1v0347600.2 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chaperone DnaK; TAIR: AT5G09590.1 mitochondrial HSO70 2; Swiss-Prot: sp|Q01899|HSP7M_PHAVU Heat shock 70 kDa protein, mitochondrial; TrEMBL-Plants: tr|I1M2K9|I1M2K9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0347600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:66036618..66039196) extracted from Lotus japonicus Gifu genome v1.2.
AAATTGCTTTTAGAAGTATATGAAATTGTGAATGGCGCTGTTTTCCTTGAAGAAGTTGTAATTGTTTTGACTTGTCTTAT GCAGGTGATAGGCAACTCTAAACCAGCATATGTTGGTCACAATTGGTCAAGTTTGTCGCGACCATTCAGGTGCGATTAAT TGTCTTGTTTTTGTTAGGAATTGTTTTAGAGATGCTCTGCTTTCGATCATAGATCAAGAGTATTCATTAACACTTTGTCA TCGTCGCTGCAGTTCAAGGCCTGCTGGAAATGATGTCATTGGTATTGATTTGGGTACAACCAATTCATGTGTTTCTGTTA TGGAAGGAAAGGTAAGGCATTCACGCTTTTTATTTTAATTAGTTTGTGTTTGTTTGTTTCCATTTTCCAATACATGTGAT GACTTGATTTTATTATATCTTTTTCAGAATCCCAAAGTGATTGAGAATTCTGAAGGTGCACGGACAACACCTTCTGTTGT TGCATTCAACCAGAAAGGGGAGTTACTTGTGGGCACACCTGCCAAGCGTCAGGCTGTAACTAACCCTGCAAACACTGTAT TTGGTACCAAGCGTATGATTGGTAGGCGCTTTGATGATCCTCAAACACAAAAGGAAATGAAAATGGTTCCATATAAGATT GTTAAGGCACCAAATGGAGATGCGTGGGTTGAAGCTAACGGGCAGCAGTATTCCCCTAGCCAAATTGGTGCATTTGTTCT TACCAAGATGAAGGAGACGGCAGAAGCATATCTTGGAAAGTCAGTATCCAAGGCTGTTATTACTGTGCCAGCATACTTCA ATGATGCTCAGAGGCAGGCAACAAAAGATGCTGGTAGAATTGCGGGTCTTGATGTTCAGAGGATTATCAATGAGCCCACT GCTGCTGCTCTTTCATATGGAATGACCAACAAGGAGGGTCTCATCGCAGTTTTTGATCTTGGTGGTGGAACATTTGATGT GTCCATCTTAGAAATTTCTAATGGTGTTTTTGAGGTATGCGCAAAGTTATTACTACTTTGTTTTCATTTCTTAAACTGTC AGAAGGAATATGAAACTTGTATTGACAATACTTTCATGTCTAGGTGAAAGCAACAAATGGTGACACCTTCTTGGGAGGTG AGGATTTTGATAATGCCTTATTGGACTTTTTGGTGGACGAATTCAAGAGAACAGAGAGCATTGACCTTTCTAAGGATAAG CTTGCTTTGCAAAGGCTTCGTGAAGCTGCTGAGAAAGCTAAGATAGAACTGTCTTCAACATCTCAAACTGAGATTAACCT GCCTTTTATCACTGCCGACGCATCTGGTGCTAAGCATTTGAACATCACATTGACTAGATCCAAGTTTGAAGCCTTAGTAA ATCACTTGATTGAAAGAACTAAGGCACCATGCAAGAACTGCTTGAAGGATGCAAACATCTCTATCAAGGAAGTTGATGAG GTTCTTCTTGTTGGAGGCATGACCCGTGTGCCTAAAGTTCAAGAGGTGGTTTCAGCAATCTTTGGAAAGTCTCCTAGCAA AGGAGTAAATCCAGATGAGGCAGTTGCCATGGGAGCAGCAATTCAAGGTGGTATCCTACGTGGAGATGTTAAAGAGCTGC TACTCCTAGATGTGACGCCACTCTCTCTGGGTATTGAGACTCTGGGTGGTATCTTTACAAGGTTGATCAACAGGAATACT ACGATTCCCACCAAAAAGAGCCAGGTACCCTTAAACATATGATGCTTACTTAATACAATTGTTTCTAAGTTGCAACTATT GGAGAAACGAGATCCAGTAATTCTAAGTAATTGGACACAAGATGTACAATTTGTGTTCATTTGAGTCCCACGTAGAAGTA TCTTGACCACTGCATTGCACACACACATTCAAGGTTTTTAAATAGAGCCTATTCATTTGTTGTGGGTTAAGCTCTTCCTA ACTTGTGATGTCATTGTTTCAGGTCTTTTCAACAGCAGCTGACAATCAAACCCAAGTGGGTATCAAGGTATTACAAGGTG AGAGAGAAATGGCATCAGACAACAAGAGTCTTGGTGAATTTGAACTTGTCGGCATTCCTCCTGCACCCAGAGGTTTGCCT CAGATTGAGGTCACATTTGACATTGATGCAAACGGGATTGTCACTGTGTCTGCCAAAGACAAGTCCACTGGTAAAGAGCA GCAAATTACTATCCGGTCATCTGGTGGTCTCTCAGACGATGAAATCGAGAAGATGGTTAAAGAAGCTGAGTTGCATGCTC AGAAGGACCAAGAAAGGAAGGCTCTCATTGATATCAGAAACAGTGCAGATACTAGCATATACAGCATTGAGAAGAGTTTG GGTGAATACAGAGATAAGATTCCCAGTGAAGTTGCAAAAGAGATTGAGGATGCAGTTTCAGAATTGAGGACGGCGATGTC CGGGGATAATGCTGATGAAATTAAGTCAAAGCTTGATGCTGCGAATAAAGCAGTCTCAAAGATAGGGGAACACATGTCAG GTGGTGGTTCTAGTGGTGGTTCTTCAACTGGAGGAGGTTCTCAGGGTGGTGACCAAGCTCCAGAGGCAGAATATGAGGAG GTGAAGAAGTGAGAAGTGA
CDS sequence (LotjaGi6g1v0347600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGGTGATAGGCAACTCTAAACCAGCATATGTTGGTCACAATTGGTCAAGTTTGTCGCGACCATTCAGTTCAAGGCC TGCTGGAAATGATGTCATTGGTATTGATTTGGGTACAACCAATTCATGTGTTTCTGTTATGGAAGGAAAGAATCCCAAAG TGATTGAGAATTCTGAAGGTGCACGGACAACACCTTCTGTTGTTGCATTCAACCAGAAAGGGGAGTTACTTGTGGGCACA CCTGCCAAGCGTCAGGCTGTAACTAACCCTGCAAACACTGTATTTGGTACCAAGCGTATGATTGGTAGGCGCTTTGATGA TCCTCAAACACAAAAGGAAATGAAAATGGTTCCATATAAGATTGTTAAGGCACCAAATGGAGATGCGTGGGTTGAAGCTA ACGGGCAGCAGTATTCCCCTAGCCAAATTGGTGCATTTGTTCTTACCAAGATGAAGGAGACGGCAGAAGCATATCTTGGA AAGTCAGTATCCAAGGCTGTTATTACTGTGCCAGCATACTTCAATGATGCTCAGAGGCAGGCAACAAAAGATGCTGGTAG AATTGCGGGTCTTGATGTTCAGAGGATTATCAATGAGCCCACTGCTGCTGCTCTTTCATATGGAATGACCAACAAGGAGG GTCTCATCGCAGTTTTTGATCTTGGTGGTGGAACATTTGATGTGTCCATCTTAGAAATTTCTAATGGTGTTTTTGAGGTG AAAGCAACAAATGGTGACACCTTCTTGGGAGGTGAGGATTTTGATAATGCCTTATTGGACTTTTTGGTGGACGAATTCAA GAGAACAGAGAGCATTGACCTTTCTAAGGATAAGCTTGCTTTGCAAAGGCTTCGTGAAGCTGCTGAGAAAGCTAAGATAG AACTGTCTTCAACATCTCAAACTGAGATTAACCTGCCTTTTATCACTGCCGACGCATCTGGTGCTAAGCATTTGAACATC ACATTGACTAGATCCAAGTTTGAAGCCTTAGTAAATCACTTGATTGAAAGAACTAAGGCACCATGCAAGAACTGCTTGAA GGATGCAAACATCTCTATCAAGGAAGTTGATGAGGTTCTTCTTGTTGGAGGCATGACCCGTGTGCCTAAAGTTCAAGAGG TGGTTTCAGCAATCTTTGGAAAGTCTCCTAGCAAAGGAGTAAATCCAGATGAGGCAGTTGCCATGGGAGCAGCAATTCAA GGTGGTATCCTACGTGGAGATGTTAAAGAGCTGCTACTCCTAGATGTGACGCCACTCTCTCTGGGTATTGAGACTCTGGG TGGTATCTTTACAAGGTTGATCAACAGGAATACTACGATTCCCACCAAAAAGAGCCAGGTCTTTTCAACAGCAGCTGACA ATCAAACCCAAGTGGGTATCAAGGTATTACAAGGTGAGAGAGAAATGGCATCAGACAACAAGAGTCTTGGTGAATTTGAA CTTGTCGGCATTCCTCCTGCACCCAGAGGTTTGCCTCAGATTGAGGTCACATTTGACATTGATGCAAACGGGATTGTCAC TGTGTCTGCCAAAGACAAGTCCACTGGTAAAGAGCAGCAAATTACTATCCGGTCATCTGGTGGTCTCTCAGACGATGAAA TCGAGAAGATGGTTAAAGAAGCTGAGTTGCATGCTCAGAAGGACCAAGAAAGGAAGGCTCTCATTGATATCAGAAACAGT GCAGATACTAGCATATACAGCATTGAGAAGAGTTTGGGTGAATACAGAGATAAGATTCCCAGTGAAGTTGCAAAAGAGAT TGAGGATGCAGTTTCAGAATTGAGGACGGCGATGTCCGGGGATAATGCTGATGAAATTAAGTCAAAGCTTGATGCTGCGA ATAAAGCAGTCTCAAAGATAGGGGAACACATGTCAGGTGGTGGTTCTAGTGGTGGTTCTTCAACTGGAGGAGGTTCTCAG GGTGGTGACCAAGCTCCAGAGGCAGAATATGAGGAGGTGAAGAAGTGA
Protein sequence (LotjaGi6g1v0347600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQVIGNSKPAYVGHNWSSLSRPFSSRPAGNDVIGIDLGTTNSCVSVMEGKNPKVIENSEGARTTPSVVAFNQKGELLVGT PAKRQAVTNPANTVFGTKRMIGRRFDDPQTQKEMKMVPYKIVKAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAEAYLG KSVSKAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGMTNKEGLIAVFDLGGGTFDVSILEISNGVFEV KATNGDTFLGGEDFDNALLDFLVDEFKRTESIDLSKDKLALQRLREAAEKAKIELSSTSQTEINLPFITADASGAKHLNI TLTRSKFEALVNHLIERTKAPCKNCLKDANISIKEVDEVLLVGGMTRVPKVQEVVSAIFGKSPSKGVNPDEAVAMGAAIQ GGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFE LVGIPPAPRGLPQIEVTFDIDANGIVTVSAKDKSTGKEQQITIRSSGGLSDDEIEKMVKEAELHAQKDQERKALIDIRNS ADTSIYSIEKSLGEYRDKIPSEVAKEIEDAVSELRTAMSGDNADEIKSKLDAANKAVSKIGEHMSGGGSSGGSSTGGGSQ GGDQAPEAEYEEVKK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 17 | 654 | 638 | 0.0 | – | |
| PANTHER | 17 | 654 | 638 | 0.0 | ||
| CDD | 29 | 404 | 376 | 0.0 | – | |
| Hamap | 29 | 653 | 625 | 35.919 | ||
| PRINTS | 31 | 44 | 14 | 5.0E-80 | – | |
| TIGRFAM | 32 | 624 | 593 | 2.2E-287 | ||
| SUPERFAMILY | 32 | 212 | 181 | 7.45E-65 | ||
| Pfam | 32 | 624 | 593 | 6.5E-274 | ||
| Gene3D | 33 | 400 | 368 | 7.6E-161 | – | |
| ProSitePatterns | 35 | 42 | 8 | - | ||
| PRINTS | 59 | 71 | 13 | 5.0E-80 | – | |
| PRINTS | 82 | 90 | 9 | 5.0E-80 | – | |
| PRINTS | 166 | 186 | 21 | 5.0E-80 | – | |
| Gene3D | 208 | 388 | 181 | 7.6E-161 | – | |
| SUPERFAMILY | 213 | 404 | 192 | 1.17E-66 | ||
| ProSitePatterns | 218 | 231 | 14 | - | ||
| PRINTS | 224 | 234 | 11 | 5.0E-80 | – | |
| Gene3D | 251 | 338 | 88 | 7.6E-161 | – | |
| Coils | 274 | 301 | 28 | - | – | |
| PRINTS | 356 | 372 | 17 | 5.0E-80 | – | |
| ProSitePatterns | 359 | 373 | 15 | - | ||
| PRINTS | 387 | 407 | 21 | 5.0E-80 | – | |
| Gene3D | 401 | 528 | 128 | 2.6E-60 | ||
| SUPERFAMILY | 406 | 562 | 157 | 3.27E-61 | ||
| PRINTS | 410 | 429 | 20 | 5.0E-80 | – | |
| PRINTS | 491 | 507 | 17 | 5.0E-80 | – | |
| Gene3D | 529 | 626 | 98 | 3.6E-29 | ||
| SUPERFAMILY | 556 | 628 | 73 | 9.42E-5 | ||
| MobiDBLite | 617 | 655 | 39 | - | – | |
| MobiDBLite | 627 | 641 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein folding | The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure. | ||
| Molecular function | Unfolded protein binding | Interacting selectively and non-covalently with an unfolded protein. |
Expression pattern of LotjaGi6g1v0347600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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