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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0347600 |
| Transcript ID | LotjaGi6g1v0347600.3 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chaperone DnaK; TAIR: AT5G09590.1 mitochondrial HSO70 2; Swiss-Prot: sp|Q01899|HSP7M_PHAVU Heat shock 70 kDa protein, mitochondrial; TrEMBL-Plants: tr|I1M2K9|I1M2K9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0347600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:66036625..66039187) extracted from Lotus japonicus Gifu genome v1.2.
TTAGAAGTATATGAAATTGTGAATGGCGCTGTTTTCCTTGAAGAAGTTGTAATTGTTTTGACTTGTCTTATGCAGGTGAT AGGCAACTCTAAACCAGCATATGTTGGTCACAATTGGTCAAGTTTGTCGCGACCATTCAGGTGCGATTAATTGTCTTGTT TTTGTTAGGAATTGTTTTAGAGATGCTCTGCTTTCGATCATAGATCAAGAGTATTCATTAACACTTTGTCATCGTCGCTG CAGTTCAAGGCCTGCTGGAAATGATGTCATTGGTATTGATTTGGGTACAACCAATTCATGTGTTTCTGTTATGGAAGGAA AGGTAAGGCATTCACGCTTTTTATTTTAATTAGTTTGTGTTTGTTTGTTTCCATTTTCCAATACATGTGATGACTTGATT TTATTATATCTTTTTCAGAATCCCAAAGTGATTGAGAATTCTGAAGGTGCACGGACAACACCTTCTGTTGTTGCATTCAA CCAGAAAGGGGAGTTACTTGTGGGCACACCTGCCAAGCGTCAGGCTGTAACTAACCCTGCAAACACTGTATTTGGTACCA AGCGTATGATTGGTAGGCGCTTTGATGATCCTCAAACACAAAAGGAAATGAAAATGGTTCCATATAAGATTGTTAAGGCA CCAAATGGAGATGCGTGGGTTGAAGCTAACGGGCAGCAGTATTCCCCTAGCCAAATTGGTGCATTTGTTCTTACCAAGAT GAAGGAGACGGCAGAAGCATATCTTGGAAAGTCAGTATCCAAGGCTGTTATTACTGTGCCAGCATACTTCAATGATGCTC AGAGGCAGGCAACAAAAGATGCTGGTAGAATTGCGGGTCTTGATGTTCAGAGGATTATCAATGAGCCCACTGCTGCTGCT CTTTCATATGGAATGACCAACAAGGAGGGTCTCATCGCAGTTTTTGATCTTGGTGGTGGAACATTTGATGTGTCCATCTT AGAAATTTCTAATGGTGTTTTTGAGGTATGCGCAAAGTTATTACTACTTTGTTTTCATTTCTTAAACTGTCAGAAGGAAT ATGAAACTTGTATTGACAATACTTTCATGTCTAGGTGAAAGCAACAAATGGTGACACCTTCTTGGGAGGTGAGGATTTTG ATAATGCCTTATTGGACTTTTTGGTGGACGAATTCAAGAGAACAGAGAGCATTGACCTTTCTAAGGATAAGCTTGCTTTG CAAAGGCTTCGTGAAGCTGCTGAGAAAGCTAAGATAGAACTGTCTTCAACATCTCAAACTGAGATTAACCTGCCTTTTAT CACTGCCGACGCATCTGGTGCTAAGCATTTGAACATCACATTGACTAGATCCAAGTTTGAAGCCTTAGTAAATCACTTGA TTGAAAGAACTAAGGCACCATGCAAGAACTGCTTGAAGGATGCAAACATCTCTATCAAGGAAGTTGATGAGGTTCTTCTT GTTGGAGGCATGACCCGTGTGCCTAAAGTTCAAGAGGTGGTTTCAGCAATCTTTGGAAAGTCTCCTAGCAAAGGAGTAAA TCCAGATGAGGCAGTTGCCATGGGAGCAGCAATTCAAGGTGGTATCCTACGTGGAGATGTTAAAGAGCTGCTACTCCTAG ATGTGACGCCACTCTCTCTGGGTATTGAGACTCTGGGTGGTATCTTTACAAGGTTGATCAACAGGAATACTACGATTCCC ACCAAAAAGAGCCAGGTACCCTTAAACATATGATGCTTACTTAATACAATTGTTTCTAAGTTGCAACTATTGGAGAAACG AGATCCAGTAATTCTAAGTAATTGGACACAAGATGTACAATTTGTGTTCATTTGAGTCCCACGTAGAAGTATCTTGACCA CTGCATTGCACACACACATTCAAGGTTTTTAAATAGAGCCTATTCATTTGTTGTGGGTTAAGCTCTTCCTAACTTGTGAT GTCATTGTTTCAGGTCTTTTCAACAGCAGCTGACAATCAAACCCAAGTGGGTATCAAGGTATTACAAGGTGAGAGAGAAA TGGCATCAGACAACAAGAGTCTTGGTGAATTTGAACTTGTCGGCATTCCTCCTGCACCCAGAGGTTTGCCTCAGATTGAG GTCACATTTGACATTGATGCAAACGGGATTGTCACTGTGTCTGCCAAAGACAAGTCCACTGGTAAAGAGCAGCAAATTAC TATCCGGTCATCTGGTGGTCTCTCAGACGATGAAATCGAGAAGATGGTTAAAGAAGCTGAGTTGCATGCTCAGAAGGACC AAGAAAGGAAGGCTCTCATTGATATCAGAAACAGTGCAGATACTAGCATATACAGCATTGAGAAGAGTTTGGGTGAATAC AGAGATAAGATTCCCAGTGAAGTTGCAAAAGAGATTGAGGATGCAGTTTCAGAATTGAGGACGGCGATGTCCGGGGATAA TGCTGATGAAATTAAGTCAAAGCTTGATGCTGCGAATAAAGCAGTCTCAAAGATAGGGGAACACATGTCAGGTGGTGGTT CTAGTGGTGGTTCTTCAACTGGAGGAGGTTCTCAGGGTGGTGACCAAGCTCCAGAGGCAGAATATGAGGAGGTGAAGAAG TGA
CDS sequence (LotjaGi6g1v0347600.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGGTGATAGGCAACTCTAAACCAGCATATGTTGGTCACAATTGGTCAAGTTTGTCGCGACCATTCAGTTCAAGGCC TGCTGGAAATGATGTCATTGGTATTGATTTGGGTACAACCAATTCATGTAATCCCAAAGTGATTGAGAATTCTGAAGGTG CACGGACAACACCTTCTGTTGTTGCATTCAACCAGAAAGGGGAGTTACTTGTGGGCACACCTGCCAAGCGTCAGGCTGTA ACTAACCCTGCAAACACTGTATTTGGTACCAAGCGTATGATTGGTAGGCGCTTTGATGATCCTCAAACACAAAAGGAAAT GAAAATGGTTCCATATAAGATTGTTAAGGCACCAAATGGAGATGCGTGGGTTGAAGCTAACGGGCAGCAGTATTCCCCTA GCCAAATTGGTGCATTTGTTCTTACCAAGATGAAGGAGACGGCAGAAGCATATCTTGGAAAGTCAGTATCCAAGGCTGTT ATTACTGTGCCAGCATACTTCAATGATGCTCAGAGGCAGGCAACAAAAGATGCTGGTAGAATTGCGGGTCTTGATGTTCA GAGGATTATCAATGAGCCCACTGCTGCTGCTCTTTCATATGGAATGACCAACAAGGAGGGTCTCATCGCAGTTTTTGATC TTGGTGGTGGAACATTTGATGTGTCCATCTTAGAAATTTCTAATGGTGTTTTTGAGGTGAAAGCAACAAATGGTGACACC TTCTTGGGAGGTGAGGATTTTGATAATGCCTTATTGGACTTTTTGGTGGACGAATTCAAGAGAACAGAGAGCATTGACCT TTCTAAGGATAAGCTTGCTTTGCAAAGGCTTCGTGAAGCTGCTGAGAAAGCTAAGATAGAACTGTCTTCAACATCTCAAA CTGAGATTAACCTGCCTTTTATCACTGCCGACGCATCTGGTGCTAAGCATTTGAACATCACATTGACTAGATCCAAGTTT GAAGCCTTAGTAAATCACTTGATTGAAAGAACTAAGGCACCATGCAAGAACTGCTTGAAGGATGCAAACATCTCTATCAA GGAAGTTGATGAGGTTCTTCTTGTTGGAGGCATGACCCGTGTGCCTAAAGTTCAAGAGGTGGTTTCAGCAATCTTTGGAA AGTCTCCTAGCAAAGGAGTAAATCCAGATGAGGCAGTTGCCATGGGAGCAGCAATTCAAGGTGGTATCCTACGTGGAGAT GTTAAAGAGCTGCTACTCCTAGATGTGACGCCACTCTCTCTGGGTATTGAGACTCTGGGTGGTATCTTTACAAGGTTGAT CAACAGGAATACTACGATTCCCACCAAAAAGAGCCAGGTCTTTTCAACAGCAGCTGACAATCAAACCCAAGTGGGTATCA AGGTATTACAAGGTGAGAGAGAAATGGCATCAGACAACAAGAGTCTTGGTGAATTTGAACTTGTCGGCATTCCTCCTGCA CCCAGAGGTTTGCCTCAGATTGAGGTCACATTTGACATTGATGCAAACGGGATTGTCACTGTGTCTGCCAAAGACAAGTC CACTGGTAAAGAGCAGCAAATTACTATCCGGTCATCTGGTGGTCTCTCAGACGATGAAATCGAGAAGATGGTTAAAGAAG CTGAGTTGCATGCTCAGAAGGACCAAGAAAGGAAGGCTCTCATTGATATCAGAAACAGTGCAGATACTAGCATATACAGC ATTGAGAAGAGTTTGGGTGAATACAGAGATAAGATTCCCAGTGAAGTTGCAAAAGAGATTGAGGATGCAGTTTCAGAATT GAGGACGGCGATGTCCGGGGATAATGCTGATGAAATTAAGTCAAAGCTTGATGCTGCGAATAAAGCAGTCTCAAAGATAG GGGAACACATGTCAGGTGGTGGTTCTAGTGGTGGTTCTTCAACTGGAGGAGGTTCTCAGGGTGGTGACCAAGCTCCAGAG GCAGAATATGAGGAGGTGAAGAAGTGA
Protein sequence (LotjaGi6g1v0347600.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQVIGNSKPAYVGHNWSSLSRPFSSRPAGNDVIGIDLGTTNSCNPKVIENSEGARTTPSVVAFNQKGELLVGTPAKRQAV TNPANTVFGTKRMIGRRFDDPQTQKEMKMVPYKIVKAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAEAYLGKSVSKAV ITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGMTNKEGLIAVFDLGGGTFDVSILEISNGVFEVKATNGDT FLGGEDFDNALLDFLVDEFKRTESIDLSKDKLALQRLREAAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSKF EALVNHLIERTKAPCKNCLKDANISIKEVDEVLLVGGMTRVPKVQEVVSAIFGKSPSKGVNPDEAVAMGAAIQGGILRGD VKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPA PRGLPQIEVTFDIDANGIVTVSAKDKSTGKEQQITIRSSGGLSDDEIEKMVKEAELHAQKDQERKALIDIRNSADTSIYS IEKSLGEYRDKIPSEVAKEIEDAVSELRTAMSGDNADEIKSKLDAANKAVSKIGEHMSGGGSSGGSSTGGGSQGGDQAPE AEYEEVKK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 17 | 647 | 631 | 0.0 | – | |
| PANTHER | 17 | 647 | 631 | 0.0 | ||
| Hamap | 29 | 646 | 618 | 35.014 | ||
| CDD | 29 | 397 | 369 | 0.0 | – | |
| PRINTS | 31 | 44 | 14 | 8.0E-79 | – | |
| TIGRFAM | 32 | 617 | 586 | 2.2E-279 | ||
| SUPERFAMILY | 32 | 205 | 174 | 1.62E-59 | ||
| Pfam | 32 | 617 | 586 | 6.0E-266 | ||
| Gene3D | 33 | 393 | 361 | 3.2E-154 | – | |
| ProSitePatterns | 35 | 42 | 8 | - | ||
| PRINTS | 52 | 64 | 13 | 8.0E-79 | – | |
| PRINTS | 75 | 83 | 9 | 8.0E-79 | – | |
| PRINTS | 159 | 179 | 21 | 8.0E-79 | – | |
| Gene3D | 201 | 381 | 181 | 3.2E-154 | – | |
| SUPERFAMILY | 206 | 397 | 192 | 1.23E-66 | ||
| ProSitePatterns | 211 | 224 | 14 | - | ||
| PRINTS | 217 | 227 | 11 | 8.0E-79 | – | |
| Gene3D | 244 | 331 | 88 | 3.2E-154 | – | |
| Coils | 267 | 294 | 28 | - | – | |
| PRINTS | 349 | 365 | 17 | 8.0E-79 | – | |
| ProSitePatterns | 352 | 366 | 15 | - | ||
| PRINTS | 380 | 400 | 21 | 8.0E-79 | – | |
| Gene3D | 394 | 521 | 128 | 2.6E-60 | ||
| SUPERFAMILY | 399 | 555 | 157 | 3.14E-61 | ||
| PRINTS | 403 | 422 | 20 | 8.0E-79 | – | |
| PRINTS | 484 | 500 | 17 | 8.0E-79 | – | |
| Gene3D | 522 | 619 | 98 | 3.5E-29 | ||
| SUPERFAMILY | 549 | 621 | 73 | 9.42E-5 | ||
| MobiDBLite | 610 | 648 | 39 | - | – | |
| MobiDBLite | 620 | 634 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein folding | The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure. | ||
| Molecular function | Unfolded protein binding | Interacting selectively and non-covalently with an unfolded protein. |
Expression pattern of LotjaGi6g1v0347600.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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