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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0347600 |
| Transcript ID | LotjaGi6g1v0347600.5 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chaperone DnaK; TAIR: AT5G09590.1 mitochondrial HSO70 2; Swiss-Prot: sp|Q01899|HSP7M_PHAVU Heat shock 70 kDa protein, mitochondrial; TrEMBL-Plants: tr|I1KQV7|I1KQV7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0347600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:66036625..66039187) extracted from Lotus japonicus Gifu genome v1.2.
TTAGAAGTATATGAAATTGTGAATGGCGCTGTTTTCCTTGAAGAAGTTGTAATTGTTTTGACTTGTCTTATGCAGGTGAT AGGCAACTCTAAACCAGCATATGTTGGTCACAATTGGTCAAGTTTGTCGCGACCATTCAGGTGCGATTAATTGTCTTGTT TTTGTTAGGAATTGTTTTAGAGATGCTCTGCTTTCGATCATAGATCAAGAGTATTCATTAACACTTTGTCATCGTCGCTG CAGTTCAAGGCCTGCTGGAAATGATGTCATTGGTATTGATTTGGGTACAACCAATTCATGTGTTTCTGTTATGGAAGGAA AGGTAAGGCATTCACGCTTTTTATTTTAATTAGTTTGTGTTTGTTTGTTTCCATTTTCCAATACATGTGATGACTTGATT TTATTATATCTTTTTCAGAATCCCAAAGTGATTGAGAATTCTGAAGGTGCACGGACAACACCTTCTGTTGTTGCATTCAA CCAGAAAGGGGAGTTACTTGTGGGCACACCTGCCAAGCGTCAGGCTGTAACTAACCCTGCAAACACTGTATTTGGTACCA AGCGTATGATTGGTAGGCGCTTTGATGATCCTCAAACACAAAAGGAAATGAAAATGGTTCCATATAAGATTGTTAAGGCA CCAAATGGAGATGCGTGGGTTGAAGCTAACGGGCAGCAGTATTCCCCTAGCCAAATTGGTGCATTTGTTCTTACCAAGAT GAAGGAGACGGCAGAAGCATATCTTGGAAAGTCAGTATCCAAGGCTGTTATTACTGTGCCAGCATACTTCAATGATGCTC AGAGGCAGGCAACAAAAGATGCTGGTAGAATTGCGGGTCTTGATGTTCAGAGGATTATCAATGAGCCCACTGCTGCTGCT CTTTCATATGGAATGACCAACAAGGAGGGTCTCATCGCAGTTTTTGATCTTGGTGGTGGAACATTTGATGTGTCCATCTT AGAAATTTCTAATGGTGTTTTTGAGGTATGCGCAAAGTTATTACTACTTTGTTTTCATTTCTTAAACTGTCAGAAGGAAT ATGAAACTTGTATTGACAATACTTTCATGTCTAGGTGAAAGCAACAAATGGTGACACCTTCTTGGGAGGTGAGGATTTTG ATAATGCCTTATTGGACTTTTTGGTGGACGAATTCAAGAGAACAGAGAGCATTGACCTTTCTAAGGATAAGCTTGCTTTG CAAAGGCTTCGTGAAGCTGCTGAGAAAGCTAAGATAGAACTGTCTTCAACATCTCAAACTGAGATTAACCTGCCTTTTAT CACTGCCGACGCATCTGGTGCTAAGCATTTGAACATCACATTGACTAGATCCAAGTTTGAAGCCTTAGTAAATCACTTGA TTGAAAGAACTAAGGCACCATGCAAGAACTGCTTGAAGGATGCAAACATCTCTATCAAGGAAGTTGATGAGGTTCTTCTT GTTGGAGGCATGACCCGTGTGCCTAAAGTTCAAGAGGTGGTTTCAGCAATCTTTGGAAAGTCTCCTAGCAAAGGAGTAAA TCCAGATGAGGCAGTTGCCATGGGAGCAGCAATTCAAGGTGGTATCCTACGTGGAGATGTTAAAGAGCTGCTACTCCTAG ATGTGACGCCACTCTCTCTGGGTATTGAGACTCTGGGTGGTATCTTTACAAGGTTGATCAACAGGAATACTACGATTCCC ACCAAAAAGAGCCAGGTACCCTTAAACATATGATGCTTACTTAATACAATTGTTTCTAAGTTGCAACTATTGGAGAAACG AGATCCAGTAATTCTAAGTAATTGGACACAAGATGTACAATTTGTGTTCATTTGAGTCCCACGTAGAAGTATCTTGACCA CTGCATTGCACACACACATTCAAGGTTTTTAAATAGAGCCTATTCATTTGTTGTGGGTTAAGCTCTTCCTAACTTGTGAT GTCATTGTTTCAGGTCTTTTCAACAGCAGCTGACAATCAAACCCAAGTGGGTATCAAGGTATTACAAGGTGAGAGAGAAA TGGCATCAGACAACAAGAGTCTTGGTGAATTTGAACTTGTCGGCATTCCTCCTGCACCCAGAGGTTTGCCTCAGATTGAG GTCACATTTGACATTGATGCAAACGGGATTGTCACTGTGTCTGCCAAAGACAAGTCCACTGGTAAAGAGCAGCAAATTAC TATCCGGTCATCTGGTGGTCTCTCAGACGATGAAATCGAGAAGATGGTTAAAGAAGCTGAGTTGCATGCTCAGAAGGACC AAGAAAGGAAGGCTCTCATTGATATCAGAAACAGTGCAGATACTAGCATATACAGCATTGAGAAGAGTTTGGGTGAATAC AGAGATAAGATTCCCAGTGAAGTTGCAAAAGAGATTGAGGATGCAGTTTCAGAATTGAGGACGGCGATGTCCGGGGATAA TGCTGATGAAATTAAGTCAAAGCTTGATGCTGCGAATAAAGCAGTCTCAAAGATAGGGGAACACATGTCAGGTGGTGGTT CTAGTGGTGGTTCTTCAACTGGAGGAGGTTCTCAGGGTGGTGACCAAGCTCCAGAGGCAGAATATGAGGAGGTGAAGAAG TGA
CDS sequence (LotjaGi6g1v0347600.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGTTTCTGTTATGGAAGGAAAGGTAAGAATCCCAAAGTGATTGAGAATTCTGAAGGTGCACGGACAACACCTTCTGT TGTTGCATTCAACCAGAAAGGGGAGTTACTTGTGGGCACACCTGCCAAGCGTCAGGCTGTAACTAACCCTGCAAACACTG TATTTGGTACCAAGCGTATGATTGGTAGGCGCTTTGATGATCCTCAAACACAAAAGGAAATGAAAATGGTTCCATATAAG ATTGTTAAGGCACCAAATGGAGATGCGTGGGTTGAAGCTAACGGGCAGCAGTATTCCCCTAGCCAAATTGGTGCATTTGT TCTTACCAAGATGAAGGAGACGGCAGAAGCATATCTTGGAAAGTCAGTATCCAAGGCTGTTATTACTGTGCCAGCATACT TCAATGATGCTCAGAGGCAGGCAACAAAAGATGCTGGTAGAATTGCGGGTCTTGATGTTCAGAGGATTATCAATGAGCCC ACTGCTGCTGCTCTTTCATATGGAATGACCAACAAGGAGGGTCTCATCGCAGTTTTTGATCTTGGTGGTGGAACATTTGA TGTGTCCATCTTAGAAATTTCTAATGGTGTTTTTGAGGTGAAAGCAACAAATGGTGACACCTTCTTGGGAGGTGAGGATT TTGATAATGCCTTATTGGACTTTTTGGTGGACGAATTCAAGAGAACAGAGAGCATTGACCTTTCTAAGGATAAGCTTGCT TTGCAAAGGCTTCGTGAAGCTGCTGAGAAAGCTAAGATAGAACTGTCTTCAACATCTCAAACTGAGATTAACCTGCCTTT TATCACTGCCGACGCATCTGGTGCTAAGCATTTGAACATCACATTGACTAGATCCAAGTTTGAAGCCTTAGTAAATCACT TGATTGAAAGAACTAAGGCACCATGCAAGAACTGCTTGAAGGATGCAAACATCTCTATCAAGGAAGTTGATGAGGTTCTT CTTGTTGGAGGCATGACCCGTGTGCCTAAAGTTCAAGAGGTGGTTTCAGCAATCTTTGGAAAGTCTCCTAGCAAAGGAGT AAATCCAGATGAGGCAGTTGCCATGGGAGCAGCAATTCAAGGTGGTATCCTACGTGGAGATGTTAAAGAGCTGCTACTCC TAGATGTGACGCCACTCTCTCTGGGTATTGAGACTCTGGGTGGTATCTTTACAAGGTTGATCAACAGGAATACTACGATT CCCACCAAAAAGAGCCAGGTCTTTTCAACAGCAGCTGACAATCAAACCCAAGTGGGTATCAAGGTATTACAAGGTGAGAG AGAAATGGCATCAGACAACAAGAGTCTTGGTGAATTTGAACTTGTCGGCATTCCTCCTGCACCCAGAGGTTTGCCTCAGA TTGAGGTCACATTTGACATTGATGCAAACGGGATTGTCACTGTGTCTGCCAAAGACAAGTCCACTGGTAAAGAGCAGCAA ATTACTATCCGGTCATCTGGTGGTCTCTCAGACGATGAAATCGAGAAGATGGTTAAAGAAGCTGAGTTGCATGCTCAGAA GGACCAAGAAAGGAAGGCTCTCATTGATATCAGAAACAGTGCAGATACTAGCATATACAGCATTGAGAAGAGTTTGGGTG AATACAGAGATAAGATTCCCAGTGAAGTTGCAAAAGAGATTGAGGATGCAGTTTCAGAATTGAGGACGGCGATGTCCGGG GATAATGCTGATGAAATTAAGTCAAAGCTTGATGCTGCGAATAAAGCAGTCTCAAAGATAGGGGAACACATGTCAGGTGG TGGTTCTAGTGGTGGTTCTTCAACTGGAGGAGGTTCTCAGGGTGGTGACCAAGCTCCAGAGGCAGAATATGAGGAGGTGA AGAAGTGA
Protein sequence (LotjaGi6g1v0347600.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MCFCYGRKGKNPKVIENSEGARTTPSVVAFNQKGELLVGTPAKRQAVTNPANTVFGTKRMIGRRFDDPQTQKEMKMVPYK IVKAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAEAYLGKSVSKAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEP TAAALSYGMTNKEGLIAVFDLGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNALLDFLVDEFKRTESIDLSKDKLA LQRLREAAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSKFEALVNHLIERTKAPCKNCLKDANISIKEVDEVL LVGGMTRVPKVQEVVSAIFGKSPSKGVNPDEAVAMGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTI PTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGLPQIEVTFDIDANGIVTVSAKDKSTGKEQQ ITIRSSGGLSDDEIEKMVKEAELHAQKDQERKALIDIRNSADTSIYSIEKSLGEYRDKIPSEVAKEIEDAVSELRTAMSG DNADEIKSKLDAANKAVSKIGEHMSGGGSSGGSSTGGGSQGGDQAPEAEYEEVKK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Hamap | 1 | 613 | 613 | 33.993 | ||
| SUPERFAMILY | 5 | 172 | 168 | 1.62E-54 | ||
| Gene3D | 7 | 360 | 354 | 3.9E-151 | – | |
| TIGRFAM | 8 | 584 | 577 | 1.8E-275 | ||
| Pfam | 8 | 584 | 577 | 8.2E-263 | ||
| PANTHER | 8 | 614 | 607 | 0.0 | ||
| PANTHER | 8 | 614 | 607 | 0.0 | – | |
| PRINTS | 19 | 31 | 13 | 7.6E-72 | – | |
| PRINTS | 42 | 50 | 9 | 7.6E-72 | – | |
| PRINTS | 126 | 146 | 21 | 7.6E-72 | – | |
| Gene3D | 168 | 348 | 181 | 3.9E-151 | – | |
| SUPERFAMILY | 173 | 364 | 192 | 1.1E-66 | ||
| ProSitePatterns | 178 | 191 | 14 | - | ||
| PRINTS | 184 | 194 | 11 | 7.6E-72 | – | |
| Gene3D | 211 | 298 | 88 | 3.9E-151 | – | |
| Coils | 234 | 261 | 28 | - | – | |
| PRINTS | 316 | 332 | 17 | 7.6E-72 | – | |
| ProSitePatterns | 319 | 333 | 15 | - | ||
| PRINTS | 347 | 367 | 21 | 7.6E-72 | – | |
| Gene3D | 361 | 488 | 128 | 2.4E-60 | ||
| SUPERFAMILY | 366 | 522 | 157 | 2.88E-61 | ||
| PRINTS | 370 | 389 | 20 | 7.6E-72 | – | |
| PRINTS | 451 | 467 | 17 | 7.6E-72 | – | |
| Gene3D | 489 | 586 | 98 | 3.3E-29 | ||
| SUPERFAMILY | 516 | 588 | 73 | 8.63E-5 | ||
| MobiDBLite | 577 | 615 | 39 | - | – | |
| MobiDBLite | 587 | 601 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein folding | The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure. | ||
| Molecular function | Unfolded protein binding | Interacting selectively and non-covalently with an unfolded protein. |
Expression pattern of LotjaGi6g1v0347600.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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