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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0354300 |
| Transcript ID | LotjaGi6g1v0354300.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sulfate transporter, putative; TAIR: AT1G22150.1 sulfate transporter 1;3; Swiss-Prot: sp|P53392|SUT2_STYHA High affinity sulfate transporter 2; TrEMBL-Plants: tr|D4IIA7|D4IIA7_ASTGL Sulphate transporter; Found in the gene: LotjaGi6g1v0354300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:66628481..66629649) extracted from Lotus japonicus Gifu genome v1.2.
GCTATTCTTCTGTGGAAGATTGACAAATTCGACTTTGTGGCTTGCATGGGAGCCTTCTTTGGTGTGATCTTCAAAAGTGT TGAGATTGGCCTTCTTATCGCGGTAATGAAAACATTAAGAGAAATTCAAAAGAAAATATTACATCTCCAATTCACCTTAT CCACAATATTTAGTACTTACTTGACCTCTTTTATGCAGGTGGCAATATCTTTTGCCAAAATCCTTTTACAAGTGACAAGG CCAAGGACTGCAATACTTGGGAAGCTTTCAGGGACTAAAGTTTACAGGAATATCCTTCAATATCCCAAAGCAACCCAGAT TCCTGGCATGTTGATTATCAGGGTTGACTCTGCAATCTACTTCTCAAACTCCAACTATATCAAGGACAGGTATAAGTATA ACATTAACATACACAATCCCAGATCAAGGTTCAGAAAATGTAGATTTGCTTAGCTTATTAATGAAACTAAGTTTGGTGAT TAACTAAATCATACTTCACAGAATTTTGAAGTGGGTGACTGATGAAGAGGTCCAAAGGACAGCGAGCGAATTTCCCAGCA TACAGTCTCTCATTGTTGAAATGTCACGTAAGGCTTTACATGATATCCTTCCATCATGATATTCGTGATTAATTTGGATG AATGAATTTATTCACTTGCAATATTCTTGCAGCTGTTACTGATATTGACACAAGTGGCATCCATGCCTTGGAAGATTTAT TTAAGAGCCTTAAGAAAAGAGAAGTGCAGGTAATAAATAATCACATAATTCAACATTTTTTACATGGTTAGTCATTTCTG TGGGAAATCATCTGGAAAATCTCTAGTTGCAGATCAAGCTTAACTCTCTGCGTGTTGTATTTACTTGGCAAAGATTCAAA ACATTGATACAACCATGCTCCTTATGCAATAGCTTAAGTCAACCAACTAATCAATTGAATTCATCTTTAATGATATTATT ATGTACAAAATAACTTCAGCTTGTAATAAATCATTGTGATGATGTTCATATCTGTGGCCTTTTTACAGCTTCTCCTGGCA AACCCGGGGCCAATTGTGATAGAGAAGCTCCATGCCTCCAAGTTATCGGACATAATTGGGGAAGATAAAATATTTTCATC AGTGGATGATGCCGTTGCAACTTTTGGTCCAAAGGGTGAAGTAAAGTAA
CDS sequence (LotjaGi6g1v0354300.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAGCCTTCTTTGGTGTGATCTTCAAAAGTGTTGAGATTGGCCTTCTTATCGCGGTGGCAATATCTTTTGCCAAAAT CCTTTTACAAGTGACAAGGCCAAGGACTGCAATACTTGGGAAGCTTTCAGGGACTAAAGTTTACAGGAATATCCTTCAAT ATCCCAAAGCAACCCAGATTCCTGGCATGTTGATTATCAGGGTTGACTCTGCAATCTACTTCTCAAACTCCAACTATATC AAGGACAGAATTTTGAAGTGGGTGACTGATGAAGAGGTCCAAAGGACAGCGAGCGAATTTCCCAGCATACAGTCTCTCAT TGTTGAAATGTCACCTGTTACTGATATTGACACAAGTGGCATCCATGCCTTGGAAGATTTATTTAAGAGCCTTAAGAAAA GAGAAGTGCAGCTTCTCCTGGCAAACCCGGGGCCAATTGTGATAGAGAAGCTCCATGCCTCCAAGTTATCGGACATAATT GGGGAAGATAAAATATTTTCATCAGTGGATGATGCCGTTGCAACTTTTGGTCCAAAGGGTGAAGTAAAGTAA
Protein sequence (LotjaGi6g1v0354300.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGAFFGVIFKSVEIGLLIAVAISFAKILLQVTRPRTAILGKLSGTKVYRNILQYPKATQIPGMLIIRVDSAIYFSNSNYI KDRILKWVTDEEVQRTASEFPSIQSLIVEMSPVTDIDTSGIHALEDLFKSLKKREVQLLLANPGPIVIEKLHASKLSDII GEDKIFSSVDDAVATFGPKGEVK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 181 | 181 | 3.5E-97 | ||
| PANTHER | 1 | 181 | 181 | 3.5E-97 | – | |
| Phobius | 1 | 5 | 5 | - | – | |
| Phobius | 6 | 29 | 24 | - | – | |
| Phobius | 30 | 183 | 154 | - | – | |
| Gene3D | 33 | 177 | 145 | 1.9E-40 | ||
| ProSiteProfiles | 53 | 176 | 124 | 29.165 | ||
| CDD | 54 | 169 | 116 | 4.14146E-28 | – | |
| Pfam | 54 | 172 | 119 | 2.3E-33 | ||
| SUPERFAMILY | 55 | 177 | 123 | 4.91E-22 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Secondary active sulfate transmembrane transporter activity | Enables the secondary active transfer of sulfate from one side of a membrane to the other. Secondary active transport is the transfer of a solute across a membrane, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters. | ||
| Biological process | Sulfate transport | The directed movement of sulfate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi6g1v0354300.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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