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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0365500 |
| Transcript ID | LotjaGi6g1v0365500.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ras-related protein, expressed; TAIR: AT1G09630.1 RAB GTPase 11C; Swiss-Prot: sp|O04486|RAA2A_ARATH Ras-related protein RABA2a; TrEMBL-Plants: tr|I3S907|I3S907_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0365500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:67773149..67781581) extracted from Lotus japonicus Gifu genome v1.2.
TGGATTTAAAAGGAATCTTGGTTGTTTGCTGGAGGAGAAGGTCTGGACCGGCGAAGACTCAAGTCTGGTACAGAGACAGA GAGAGGAGTTGAGTATGAGTATTGAGTATTGATTTGGAGTAGAAGAGATGGCGAGAAGGGGTGAGGAAGAGTACGATTAT CTGTTCAAGGTTGTGTTGATCGGAGATTCAGGTGTCGGTAAATCCAATCTCCTCTCCCGATTCACCCGCAACGAGTTCTG CTTGGAGTCCAAGTCCACCATCGGCGTCGAATTCGCTACTCGTACTCTTGAGGTAGGTCGGTCAGCTTTCTTTCTTATGG ATCTATCTCCAATCAATCTCACTTATTATTCTTAACCATTTAGATTTAGATTTAGATTTAGATTTAGGGCTTGTGCTTTG CTCCATTATTCATTTAGTAGCTGTAGGCGTATGTATATATAAATTGCAATTTCCATTTTCCACAAGAAAATAAAATATAG AAAGACTTCAGATTGCTCTTAATTATTTTACCATTCTATTTATAGTCATAGGAATGAATTGGTGATGAAGATAGATAGAG AGATAGATATATTGAATTATTGATCATGATATGCGAATCTATATCAATTATTTAGGTTGAGGGAAGAATGGTGAAAGCTC AAATTTGGGATACGGCTGGTCAGGAACGGTACAGGGCAATAACCAGTGCGTACTATCGCGGTGCTCTGGGAGCTCTTCTT GTCTACGATGTCACCAAACCAACCTCTTTTGAAAATGTAACCAGATGGCTCAAGGAGCTCAGGGATCACGCTGATGCTAA CATCGTCATCATGTTGATTGGCAACAAAACGGATCTCAAGCATCTCCGTGGTGTTGCCACTGAGGATGCTCAGAGTTATG CTGAGAAAGAAGGCCTCTCTTTCATCGAGACATCTGCTCTTGAAGCAACCAATGTTGACAAGGCTTTCCAAACCATCCTT GCTCAAATATACCGCATCATCAGTAAGAAATCACTCTCTTCTTCATCCACTGATCCGTCTGCTCCCAATATTAAACAAGG TAACACCATCACCATCGAGGGAGGACTCCAACCCAACACATCCAAGTCCTGCTGTACTACTTCTTGAACTGAATACGTAA TACTCTACTTTTCAAATTCAATCTCTGTTGCTGCTCCTTGTTTTGTTTTCTTCTCTATCATTCTTTTTTCAACTAACTAT GTGATCAATATTTCATATTTGTATTTCATAATCATTGAGTTGTGCCTATCACTTTTATTTCTCCTTGTGCTAGTACAACC TCACTATCACTAGTCAGTAGTCACTAGGCTTGGCTGCCCTTTTCATTCATATTTTCTGATCCCTATCAAATTTGCTTTGG TGGGTGATAACAATATTCACGGATTGATCAAAGATTACTAATTTGATCTTTTTTTTGTCAAAGGCGGGTGGGTTGCACAG CTACACTTACACCATGTGGAAATAAAATCACATAGAGCAATACTACAATGTAGATAAGTAAATTAACATCGAACATGCTC TCTCAAGCTGATACATTCAATTGACACAAAAGCCTCTCTTTTATTGAAGGTGAGGATCATGCCTCAGTTTTTTTTTAATA AGCCAAATATATTAATTGGAAGCACAATGAGTGCTCCAACCTAGTTAGCAATAAATTTTAGAACATCAAACAAAACTAGT AACACGAGCACTATATCACTTTTATTCCAGCACTATATCAGTTAATAGGACAATGCCTCCGTGATGTCACCATCAACTTA TGCTGCTTGTGGTGTTTCACAGTGTAAAATTATGATGCATACACGAGCAATTCCATCCTGCACCAATATAAGGTTTCCCT AGCTATCAGACATGAAAATGAGAGCCTGTGAGATATAATGAGCAATGTGATGTGATAGATAAATAAGAGAAAAATATAAA GTAAGTTAAAATTTGATGAAAAAGTGTGGATGTATAATTATTCTTTTAATGGAGGGGTCATACACACAAGAATCACAAGT CCAAGATTAGAGCGCGGAGGGGCTTCAAATGTTGAAGTCACGTATTGATTGAAGAAAATGGGACGTTTTGAGATGTTTAT CATTATTCACATGAATTTCAAAAATTGAAACTGCGATTAATGGCCCGACATCACAGCATAAGTAAAATATATTTTGTAAG AGCTGTCATGTAGTCGGATAAATACAATGTTGCTGATATAGCCAACTACTATAGATGGAAACTATTAATCCTTCCGCGTT TGAGATGAAAGCTTTGATCAAAATAACGATATAGTAGCATTTACCTAGTGACTTGAGGGCACGTTAGTATAAGTGTATAA CCAGTGTCATTTACCTGCCCATGCATACTCCATACTTTTTATATTTTTTGAACTTAAAAATAGGAAAAAAAGATTACTAC TTTTGTAATGAAGAATATCATGAAGGACTCGGCTGAACATGTTCCCTAAAGAAGAAACTCTTTCCGCGCAAAATGAACTG CATATGCTTGGTCATAACATAAAAACCTACTGAATATGCTTTGTCATCAATTTATCATGTTTTTCTCATGCATAGTATAA TAGCATTACAAAGGTCCTTAATGCCTGTGCATGCTTATGGAGTAAGTCTGCATAAGGAAAAAGTTCACTCCAATTCCACT TACACTTACACTTATGAGAGATAGGAAGAAAAGAAAGAGAAATGAGAGATATGATAGACGATGTTGTAGGAAAACAAGAT AAGTTAGAGAAAGTGAGTGAAAATGAGATAAAATAAAAAAATGGAGTGTGAACAGCAAAAACCCGTTGGCAAAATAGTTT CATACTTTCATCAAGCCTCAAGCTAGTGAGAAATCGCCACCCTTAAATTCTAAATTTGAGAAGTCATTAGAAGATAAGAT TCAGAACTATGTTATATAAGGATTTACTACATGATATTTTAGCTGTTTCAAACATCCATGTAACATCCATACCTTGACAG AGTCAGGAAACAAGTTCTCTCTTAATATAGCAGTGTTGCTAGAAAAATACAAGTTCTACCTAACCACAACAGTTGCTCTT CTGTGGGATTGGTTGCCCTTTCATTTGAACAGTTTCTGCTGACTTACTACCAGTTGGTTGGCTTCCCATCCTGCACAAAA GTTCAAATCAAATTGAAGCCCGAATAACTAAAAAGTCTCTACTTGTCTTATAATGGAACTCGTGCTATTGCAAGAAGAAA GTAATGGAGTTATGTGATTAGAAAAATAACACTAGATAAGTCTAAGGAATAAAAATTGGCACATATTATCTTGTGAGAAG AATCTTGATTTTGACCTACTGTTAACTTTAATCTTAAACATGTTGGAAATCTCAGTATGGTCAAAATCAAGCAAACAAAC AGAAAAATCTTAACATTTTTCAGCATTTGTGATTTGATAATGATCCTGAATGAGAATAGCGGAAAGTAGAAATATTAGAT ACTTCTTCTTAATCTCTGCTGCCATAGTTAAAAAAGCCTGCTCCACATTGATCGAGTCTTTAGCACTTGTCTCAAGGAAA GGGATACCAAGCTCATCTGCAAATGCCTGTGATTCATGAACATACAGGATAAGTTAGAAAAACAATGTAGGATTCTCTTA CTCTTTTGTTTTTAAAACATACAGAGTAACTGATGCTTCATTTACTGTTCAGGTACATGCTTCTTTAATAAGTGAACAAT TCTATGTTAAATTAAATAAATAACATCACAGCATTGGACATGGATAATTAATATTAAAATGCGGATTATTATATGTGACA TATTCAGCCAATATTAAATTTAACTACACACCAGTGCACATGTCAAAAACATCTTTAGTAATGTTCCGGGAACCCTGACC GGGGACGGTCAGGGCACCCAGGACGGGGCTGGGCCCCACGGAGCGTCCCGGCTAAGGGACAGTTTGGGGGAGTCTGAGAG CCCCTGCTCATGGGCCCCACCACCAAGGGTGAGGACAAGGAACCCGGGGCCCACTATCTAGAGGTTGACCTAGGCCAACT ACCCTAGGAGGTAGGTTGGCTGGTGCAGATCCGTAGGGGCCCCCAAACCGTTGGATCACTGTTCCTCTGCAGGAAATCCA ACGGCGATCCGTGCCCCCAGGTACGAGCCATGCATGACGTTGCATGGCTCCAACCCGAGTTCTACCTCTCCTATATAAAG GGAACACTTCTTCTATCTAAAGGTAACGTATTCTCTCCAAATCCACCATTCTTACAACTTCCCTCACTGACTTTAGCATC GGAGTGTCTTGCAGGAGCCCCTCCCGGGACCTTGCCTACTTGGAGTCCTTCAGCGCGTCCAGATCCCCTCTCTCCTACCC CTTGTCAACGGGTAGCTTGATCTCTTCCAGATCAATTGGCGCCGTCTGTGGGGATCTGGTAAAACTCTTCCCAGCACCGC GTGCCGTCGCCTCAAGTCATCAACTAGCAAGCTATGGTAGAGACACGTCAGACTTCACACCGTCCTGTACCAACTCCTGA GGGCCATGTGGAGACTGTCAACGAAACTACGGATCGCAGAACCCCTCCTCCTCCCCAACACCCTCCTCCGAGCCAGCTAT TACTGGCCGACCCTAGAGAAAGACGCTGCGGAACATGTTAAGCAATGTGACCCCTGCCAGAGGCACGCTGATCTACACAA CGCTCCCCCCGCCCGTCTTTCATCTCTAGTCAGCCCTTGGCCTTTCCACCAGTGGGGCATGGATTTATTAGGCCCGTTCG ACACTGCACCCGGCCAACTCAAGTACCAGTGGACTACTACACCAAGTGGATCGAGGCCGAGCCACTAGCAACAATTACCT CAGCTCGAGTGCAACATTTCTTCTACAAGAACGTCATCAGTAGGTTCGGGGTCCCCGGGATCCTGGTCACAGACAACGGG ACCCAGTTTACCTCTAAGGGGTTTAGGAACCTCTTGGACGGGCTACACATCAAGCAGCGGTTCACCTCCGTCGAGCACCC CCAAACAAACGGGCAGGCAGAGTCGGCCAACAAGGTCATACTCCGAGGCCTCCGGAAGAGGTTGGGGAGCGCCAAGGGCG ACTGGGCCGAACAACTCGACCACGTCCTATGGGCATACCGCACTACTCCGCACTCGACTACGGGGGAGAGCCCCTACCGC CTCACCTTTGGCACAGAAGCAGTGATTCCGGCCGAAATAGGAGAACCGAGCGCTCGAACGACTGGGTTCGACCCCAACCA GAACGACCAACTCATAGGGGAAGACCTCGACCTCCTGGATGAGAGAAGAGCAGTTGCCAACTGCAGGGAGTTGATCGCGA AGCAGCAGGCAGCCATCCGCTACAACAGGAAAGTAGTTCTCCGCTCGTTTGCCGCGGGGGACTTAGTCCTCCGAAATGCC AGCATCGGAGCACGATCAACCGAACGGGGAAAACTAGCGGCCAACTGGGAAGGCCCTTACAGGGTGGTCGAAGCAACCGG CAAGGGAGCATACAAGCTGGAGACTCTAGCCGGAAAGGAGATCCCTCGCACCTGGAACGCAGCCAATCTGAGAAGATACT ATAGTTAGGGCGCGACCGACCAGGCACCCGCTATCTGTTTCTACGCTTTCCTTTAATTTAGTTTTTCCTTTGTAATCAAG GGTACTCACCCAGCGTCCCAACTTTGTACGCGGCTAGAACCGCAGACCCCAATCGAAGTAATGAAGCAGTTTTTTGTTGA GTTCGAATTCTGGTAACCGCCAAGACCCACCGGGCACGAAATTATTAAAGACCCTCCGGGCACAAAGACCCATAGGGCAC CAGGACCCGCCGGGCACCAAAATTTCAAAGACCCGCCGGGCACAAAGACCCATAGGGCACTAAGACCCACCGGGCACGAA ATTATTAAAGACCCTCCGGGCACAAAGACCCATAGGGCACCAAGACCTGCCGGGCACGAAATTATTAAAGACCCATAGGG CACCAGGACCCGCCGGGCACAAAAATATTAAAAGCCTTTCCGGCACGAAATAACTCAAAGACGAGTAAAGAAGAAGGAAC GCGGTGCAAAAAGAAAATATAATAATAAGTTCTTACAAACACGATGAAGAATAGAAACAACGCGTCTTTGCAAACACATA AAGAAAATTAAAAAAAGGAGAAACCCACAAGTTTATACAAACACAGGACAATCATTAAACATGACAAGTTACAATTAAAG ACAGGAACTTCAAGGAGCTGGCTCGGCTGGGAAGGTCGGAGTAAACTGCTTCTGGTCGTCCAAAGTCCCGATCTTTCCCC CCAACACAACCTTCCGATAGTGAAGAGGGCCCACATCCAGTCCCGGATGGACCACCTCAAGCTGAGCCAAAGCATTGTCA AAAGAAGCCTTGTGAATCTCCTTCAGATTCGACCTCATCTTCTTTCTCTCTGCCCCCAGGTCGGCAGCTTTCTTCTGGAG CTCAGCATTCCTTGTCTTCAGAGCCTCCATCTCCTTGAGTTCCCCCTCTCGAGCAGCTTTCTCATCCTTCAGTTCCTGCT CAGCTTTCTCTGCCCGGCTGCGCAGCCAGTCGTTGTCTTTCTCGCTCAGCTCCAACTTCTCCGCGAACTTCTTGGCCGTG GCCGTCACCTCATGAACCTCCCCTTGTAGCTTCACTTTGGCAGCGGTCAGCTCTTGAACCTGTTTCCGGGAGTCAGCCAA CTCCTTCTCCGCCTCAGCGAACTTACGCTCGGCTTCGTTCACCTGCTCCTTGACTTCTTCCACGTCAAGCACCGGCCCCT GCTACACATGACGAATGACGGAGGCAGTCTGAAGCAGTGCTTTCAGAGCATAGTTCAGGAGATTGTAGGGTTCCTTCGTA CTCAGGAACGACTGGTCGAGCTCATTGTACACCAGAGCATCGATTTGACTGTTGTGCTCATCCGTGTCCACCGCATCGCG ACCCCACACAGAAGTTGGCTCCGAGGGACACACTTGGGTAATCGGAGTCACTCGTTCAGGAGAGCGGACCTCCCCACCCG AGGAGCGGCGTTTTCTCTTGACCGGGCGCTCCGAGACAGCCTTATCCCCCTCAAGGGAACCCTCCTTCTGACGTTCGGGA TTCACTGGGCCCGACTCGGGATCCGTGGTTTCTTCACCGTTGACCGACTCACTCTGACCGGCCCCAGCAGGGTTGGCCCC AGCTAAAGGTTGCCTCTGGTTGCCAAGTCCGTCTCCCTCGTCTCGGGGAACCTCCTGTTCCCCCTCACTGTCGGTCTCAA CCTCGTCAACCAGAACTTGTAGCGCAGCGACCAAAGCAGCGTTGATCTCCATCTTAGCACCTGTACAGAGATGACAAGAG AAAAGTTAGTCAGGCAAATGGGCACGTATTACTTTAAGCATAATGATAGAGACACCTTACCTCTCGCGCGCAATAAGCAC GCGTTCTTTCGAACGCTGTAAGTGCACAGATCGTAACAACGCAACGGCCGTATGCAGAACTCCTTGGGTGGATTTCCCCT CGTTTCCTTCCGGATCGCGGCCACCAGGAGATTCTTGAAGGCCAAATCAACCTCCGACAAGGCCCCGGCCTCGAAACCGA AGGAGCTAAGCTTGACATCATAGTGTCTGGCATTCCACGCCAGCGGGAACCGAGCACGGCTGGCGCCGCTCGGGGCCCGC TCAAACCACCAATGGGGAGGCGGAGTGGTCGGCGCCACCCGGAAGAATTGATCTTTAAAGTCCCGGTAGGACTCGGCGAA CGGGTGGAAGATCTGGAGATCCTTACCCGACCTCAGGGTCACTATCCCGTGTGCCCACCATGTCCTTGAGTCTGGGCCAC CTCGAATAAATGAAAAAAAGAGCGGAATCGACGGCTTCTGGCCGAACAAGACGCAAGCGACCTCGTAAGCACGCACGAAA CCCCAAGCGCCGGGATGAAGCTGCGACGGCGCGACCCCCATATGGCGGAGAACGTCACATTGAAAATCCGTGAGCGGCAT CCTCACCCTCACCTTCTTCATGGTGTAGATATGCATGTACACCCCAAACGGCGGGGTGTGGGGTAGCCGCTCCTTCTTGC CCGGCGAATACACCATGTGACCGGGGCCGATCTGGGTCTGCGACATAAAACGCTGGCTCCAGAAGTAATCTTCATTCTCG TGGGCGTACTCCGACGGGAGATCGAGAATGGTGCGGCACCACTTGTCATACACGACCTCGTCCCCCTTTAGATGCGGAAA TTTCTCCCGATCGATCTTCTTATTCTTGGGGGCCCCTGACCGGGGCCTAGAGGTTAAAGCCCCGCCCGAGGCCTCATCTA CAGTCTTGCCTTTCTTCTTCTGGGTAGGCTTCCCCATAACGACACCTGCACAAGGGAAAACGCCGTATCAACACCTAGGT CGTTTGAATCGGCTCAAAGAATGACCCACCCGGAATCCATCTTTGCCCTAGGCAGGACAGCGCGACCGTGCGGCGGCGCA GACCCTCAGAGAGAATCTCCTCCGCCGCAAGAG
CDS sequence (LotjaGi6g1v0365500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGAGAAGGGGTGAGGAAGAGTACGATTATCTGTTCAAGGTTGTGTTGATCGGAGATTCAGGTGTCGGTAAATCCAA TCTCCTCTCCCGATTCACCCGCAACGAGTTCTGCTTGGAGTCCAAGTCCACCATCGGCGTCGAATTCGCTACTCGTACTC TTGAGGTTGAGGGAAGAATGGTGAAAGCTCAAATTTGGGATACGGCTGGTCAGGAACGGTACAGGGCAATAACCAGTGCG TACTATCGCGGTGCTCTGGGAGCTCTTCTTGTCTACGATGTCACCAAACCAACCTCTTTTGAAAATGTAACCAGATGGCT CAAGGAGCTCAGGGATCACGCTGATGCTAACATCGTCATCATGTTGATTGGCAACAAAACGGATCTCAAGCATCTCCGTG GTGTTGCCACTGAGGATGCTCAGAGTTATGCTGAGAAAGAAGGCCTCTCTTTCATCGAGACATCTGCTCTTGAAGCAACC AATGTTGACAAGGCTTTCCAAACCATCCTTGCTCAAATATACCGCATCATCAGTAAGAAATCACTCTCTTCTTCATCCAC TGATCCGTCTGCTCCCAATATTAAACAAGGTAACACCATCACCATCGAGGGAGGACTCCAACCCAACACATCCAAGTCCT GCTGTACTACTTCTTGA
Protein sequence (LotjaGi6g1v0365500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MARRGEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLEVEGRMVKAQIWDTAGQERYRAITSA YYRGALGALLVYDVTKPTSFENVTRWLKELRDHADANIVIMLIGNKTDLKHLRGVATEDAQSYAEKEGLSFIETSALEAT NVDKAFQTILAQIYRIISKKSLSSSSTDPSAPNIKQGNTITIEGGLQPNTSKSCCTTS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 202 | 199 | 5.0E-119 | – | |
| PANTHER | 4 | 202 | 199 | 5.0E-119 | – | |
| Gene3D | 6 | 215 | 210 | 8.0E-69 | – | |
| SUPERFAMILY | 7 | 181 | 175 | 6.65E-61 | ||
| ProSiteProfiles | 8 | 215 | 208 | 36.186 | – | |
| CDD | 10 | 174 | 165 | 2.11936E-128 | – | |
| SMART | 10 | 176 | 167 | 9.2E-29 | – | |
| TIGRFAM | 11 | 170 | 160 | 5.1E-40 | ||
| SMART | 13 | 176 | 164 | 2.3E-110 | – | |
| PRINTS | 13 | 34 | 22 | 1.3E-41 | – | |
| Pfam | 14 | 174 | 161 | 2.4E-61 | ||
| SMART | 15 | 175 | 161 | 1.8E-12 | – | |
| SMART | 18 | 216 | 199 | 1.2E-5 | – | |
| PRINTS | 36 | 52 | 17 | 1.3E-41 | – | |
| PRINTS | 54 | 76 | 23 | 1.3E-41 | – | |
| PRINTS | 116 | 129 | 14 | 1.3E-41 | – | |
| PRINTS | 151 | 173 | 23 | 1.3E-41 | – | |
| MobiDBLite | 182 | 218 | 37 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi6g1v0365500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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