Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj2g3v1426600.2

Overview

Field Value
Gene ID Lj2g3v1426600
Transcript ID Lj2g3v1426600.2
Related isoforms 2
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: ABC transporter B family member 26, chloroplastic-like [Glycine max] gi|356560569|ref|XP_003548563.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
ProSiteProfiles
PS50893
2 237 236 24.85
IPR003439
SUPERFAMILY
SSF52540
12 238 227 3.00E-81
IPR027417
Gene3D
G3DSA:3.40.50.300
14 232 219 4.60E-76
IPR027417
PANTHER
PTHR24221:SF210
16 241 226 3.20E-141 –
PANTHER
PTHR24221
16 241 226 3.20E-141 –
Pfam
PF00005
19 165 147 6.00E-34
IPR003439
SMART
SM00382
26 214 189 2.10E-18
IPR003593
ProSitePatterns
PS00211
137 151 15 –
IPR017871

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0016887
Molecular function ATPase activity Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction.
Subterm of

Genome browser

LORE1 insertions 24

Expression data

Expression pattern

Expression pattern of Lj2g3v1426600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v1426600.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.