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| Field | Value |
|---|---|
| Gene ID | Lj3g3v3374660 |
| Transcript ID | Lj3g3v3374660.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: U-box domain-containing protein 43-like [Glycine max] gi|356541541|ref|XP_003539233.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 477 | 477 | 4.50E-262 | – | |
| Phobius | 1 | 125 | 125 | – | – | |
| PANTHER | 1 | 477 | 477 | 4.50E-262 | – | |
| Gene3D | 15 | 477 | 463 | 3.70E-41 | ||
| Pfam | 20 | 354 | 335 | 1.20E-04 | – | |
| SUPERFAMILY | 60 | 380 | 321 | 7.88E-35 | ||
| SMART | 73 | 113 | 41 | 0.68 | ||
| CDD | 82 | 196 | 115 | 0.00220531 | – | |
| ProSiteProfiles | 84 | 126 | 43 | 9.292 | ||
| SMART | 114 | 157 | 44 | 180 | ||
| Phobius | 126 | 144 | 19 | – | – | |
| Phobius | 145 | 477 | 333 | – | – | |
| SMART | 200 | 238 | 39 | 5.5 | ||
| SMART | 333 | 373 | 41 | 45 | ||
| SMART | 406 | 446 | 41 | 1.7 | ||
| SUPERFAMILY | 412 | 473 | 62 | 7.88E-35 | ||
| Pfam | 412 | 444 | 33 | 3.00E-04 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj3g3v3374660.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v3374660.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.