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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0044200 |
| Transcript ID | LotjaGi1g1v0044200.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Anaphase-promoting complex subunit 5; TAIR: AT1G06590.1 anaphase-promoting complex subunit; Swiss-Prot: sp|Q8H1U4|APC5_ARATH Anaphase-promoting complex subunit 5; TrEMBL-Plants: tr|A0A0S3RJT4|A0A0S3RJT4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0044200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:6004019..6008055) extracted from Lotus japonicus Gifu genome v1.2.
GGATCTGGCAGCAGCTCTAATGTTTCCCAATTCTGTGCCCAACCAACCTCAATTCCTGGATCTGTGCTGCAAGTATTAGG TTCGTCTTGTATACTTCGTGCAACTGCATGGGAGCTATATGGCAGGTAAAGTCTATATCAGTGTTGTCGTTATGTATGAT TATATGGACTAAGGTTGTACTAATTATTATTCTCTGTCTCATTCTATTTTTGTTTTTTTGGGAAATTGCCCATTAACAAG ATATAATATAATTGATTGTTTCATTGATTTAAGGGTAACCTATCAATAAAAGAAAAAAATGTCTTTGGCTCTTTGCTTTA ACAAGCTGACATTGCTTAAGAATAAATGTAATACTTTCAAGAAAAGAGACAATTGGTGTTATGAAAGCATTTATGTTGAG GTGAATACGAGTCTGCCAATGAATACAAAGGGTGAAAAATAGTTGTGGTTTGAGTGAATTTCGGAAAGGAAGCCATTGTC CTCACTTCTTATGCAGTCACTTTAACTATTTCCTTGGCGGCACCTGTAGTCTGATGATTTTTTACGTCAGTTCAATACTC TTAAGAAACATTTTACTTGTCAAGTGGCATTGTGTGTTGTCCTTCTTGTCGGACAACTGAATGACTTCAAGTGTACAAAT AAAGAAATTCATCCACATTATTGAAAGACAAAATATTCTCACTGAATGTGAGAGAGAGAGAGAGAGAGAGAGAGAGATTC AGATATCTATACACAAAAATTAGTAACTTTGTATTCTGAATATTTTACCAATTACTGCTACTCATAGCAACACAGTTTTG TTATGAAATCTTTCATCACACCAGGTTGATGAAAGGCATAGTTCTTGTTGTCTATGCATATGTAATGCTTATTTCAATGT TTTTGTAATATCTTGATTCTTGAAAGCTTTCGATATGTATTTCATTGCCTGACTTAATTTTTTTTACATTGTAATTAGCT CCCCACTGTCTCGCATAAATGTGCTAGTGCATGCAACTTGCTTTGCAGATGCATCAAGGTAGCTTCTTATTAGTATTGTT TTTAACATATTACATAAATTACACTTCAAGTTGCTAATTCTGTATTACATTTGGTTATTATTAGAAACCACTACATTAAC TTTTTTCTTGGTTTCCCCAGTTCATCAGATGCAGCGTTAGCATATGTAAAGCTCATTCAACATTTAGCAGTCTTTAAAGG ATACAAAGGTTAGATTGGTTGCATAAAATTGGATTTAATTTAACTGTTTGATTATTATTTTTACTCCATGTTCCAAATAT GAATTTGTTTGGTTTTGTTTTGTAATTTTGTTTATAGTTTGTAAATCACCTGGGTAACGGTTTACACTGCACATTAACTA AGGGAAATTGTTCTGCACAAATTTCCTCTTTAATATGGAGTGGTCTTTTCTTTCTTCATCTTGAATGTTGGTAGAGGGTA AAAAGTCCCGTGACATGCGCAAGGCCTTCTCTTGCTTTTTTTTTCTTCTAATGTTTTCCTTTTCTCTGTTTGTAGAGGCC TTTTCTGCCCTTAAAGTAGCAGAAGAGAAGTTTCTATTTGTCTCAAAATCACAAATCTTACAACTAAAGTTGCAGCTGCT TCATGAGCATGCTTTACATCGGTAAGTGGCCTAGGTCAATAGTTGTATTCAGAATTTGAAATTCTATTAGCAGCTGAGAT TTCATCATTGTTAATAACTTGATTAACCATCATGTAGTGGACGTTTAAAGCTAGCCCAGAAACTATGTGATGAACTTAGT GTTTTGGCATCGCCTGTAACTGGTGTAGATATGGAGCTAAAGACAGAAGCAAGCCTTCGCCATGCTCGCACATTGCTTGC AGCAAAACAATTCCGAGAGGTTTTCTTTTCCCTCTACGTACTAAATTAAAACTACCCAGAAAACTAATCATAGGTTATTC GCAGATCAGTCATTCTTCAATTTTTAGTGCATAGTTGTTGTTCTTCATAGGTAACTAGGGATCATAATCTTTAAATATAT CATATACTGATGAATTGTGATAGATAAACATGACAATAAAAAATGTAAAACTTCCTATTAAACACAGACATGTGTGCATT CCCAAAATAATTATTTATTTGTATGGGATTACACTATGGCAGTTGTGGGCAGATATAGTGGTGTAGGATGTAAACAGGTT GTGTTGTCCAACAAGAAGATGGTCTCATAGACTCATACTCATGAATGATAATTGATAAGCCAAGCAATAAAAAAATGGAT AAATAAAAATTGTCAAAGGCACTTATGAGTATACTTTATCGGCTTTGGTTCCCCATGCAGCAATAGCTGTCACTATTGCT TTCCCAATTTAATCCATCTCCTTTAATTTTAGTGTATTAGTGTATTGTCAAGATTGCTGGACCTTTATCATGGTGTATCA GAAAAAGTCTGAAATCAATCACTGTTAGCTAGTGCCAAATAGAACGATAAAAAAATATTTATTGTTTTAGCTTTGTATTT AAATTTCATCAATTCTTTTTTAGGCAGCTGCTGTGGCACACTCCCTCTTTTGCATGTGCTACAAATACAACCTGCAAGTT CAGAATGCTTCAGTTCTTCTTTTACTTGCTGAGATTCACAAGGTATGTTAATGTGGTGGTTTTGTCTAAAACACGTGGTA GGTCGTGTAGTCTGGATCAAACTATATATGGTTGTTATTTGCTATTTTTTTGCATAGCTAGTTGTCATAACTTGCTGATT TTCAAGTGCCTAGTGATGCCCCCCTTCAATTTAAATGAAGGGAGGAAAAAAAAAGTTTATATGAAATTTTAGTTAGCCTC TTTGTGCTTGTAATAAGCATTCATTAGCATCATTTTTTATTAAGGGGAAGATATTTGTCAGTCATGACTGTAAATTTTTA ATCCACTTGGATTTAACTAAGTAATGGTAATCTTTTCTTTTCTTTTTAATGCATGATTTACGAGACATTCTAAATTACTG ACTGCTGCAAAGCACCAACTTTCTCATTGTTGTGTTCTCTACTGTTTGTTTACAATAAATCCTTCATTTATTTGTTTTTA TCAGAAATCAGGCAATGCAGTTCTAGGGATTCCGTATGCTTTAGCAAGCCTCTCATTCTGCACATCATTTAACCTGGATC TTCTAAAAGCCTCAGCTACTCTTACTCTAGCTGAGCTGTGGCTCTCCCTTGGATCAAACCATGCAACAAGAGCTCTCAAC CTCGTCCATGGAGCTTTCCCAATGATTCTTGGTCATGGTGGTTTGGAGCTCTGCTCACGGGCCTATATTGTTGAAGCAAA ATGCTACCTTTGCGATACAAACTTCAACAGTATGTTGCGCAGACTATGAATGCTAGACTGTGCTATTCAAGTTTGTTGTG TACATATATGTTCACTTCTGTCTGTGATGTGTTTTTGACTTTTTTGCCCCCAACCCCAAAATTTTCCCCAGTCAGTGAAA ATGTTTAATGGCTTTCTGAGGGGGTTTAGTCCCTTGTCTATTCTCCTTTTCTCCACATGCTGAGGATTCAACTTAATTGT TTGCGCATTTGAATTTCTTTCAGTCTTTGAAGATCACAACATTGTCATAGATTCACTGAGACAAGCATCAGAAGAACTCC AGCTTCTGGAGGTAAGCAAACTTTCGGGTTTGGATCTTGTGTGTAATTTTCAAATTGTCCTTTTTTATTTGCAAGACAAT AGGTAGCATCTCTGTTTCACGTCAAAGTTCACTTGGATCCTTGCATGTGATACTAAAGTATTACCTATCTTTAAATGGAA CCTGAAGTTAATCAAATATGCATAACTTAAGTCTTGAGAACTAATTGGTTAATGTACTATGTGGTGCTTTAGATTTTTTG TGTCATTATAACATTATATCTTGTGTCCTCTGCAGTTTCATGAATTGGCAGCTGAAGCTTTCTATCTGATGGCCATGGTG TATGATAAACTGGGGCAGTTTGAGGAAAGGGAAGAAGCTGCAGCTTCATTTCAGAAACATACACTGGCTCTCACCAATCC TCAAGATCAGGATGATCCTCTTATTAGCACGTTTTGA
CDS sequence (LotjaGi1g1v0044200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCATATCTCCCCACTGTCTCGCATAAATGTGCTAGTGCATGCAACTTGCTTTGCAGATGCATCAAGTTCATCAGATGC AGCGTTAGCATATGTAAAGCTCATTCAACATTTAGCAGTCTTTAAAGGATACAAAGAGGCCTTTTCTGCCCTTAAAGTAG CAGAAGAGAAGTTTCTATTTGTCTCAAAATCACAAATCTTACAACTAAAGTTGCAGCTGCTTCATGAGCATGCTTTACAT CGTGGACGTTTAAAGCTAGCCCAGAAACTATGTGATGAACTTAGTGTTTTGGCATCGCCTGTAACTGGTGTAGATATGGA GCTAAAGACAGAAGCAAGCCTTCGCCATGCTCGCACATTGCTTGCAGCAAAACAATTCCGAGAGGCAGCTGCTGTGGCAC ACTCCCTCTTTTGCATGTGCTACAAATACAACCTGCAAGTTCAGAATGCTTCAGTTCTTCTTTTACTTGCTGAGATTCAC AAGAAATCAGGCAATGCAGTTCTAGGGATTCCGTATGCTTTAGCAAGCCTCTCATTCTGCACATCATTTAACCTGGATCT TCTAAAAGCCTCAGCTACTCTTACTCTAGCTGAGCTGTGGCTCTCCCTTGGATCAAACCATGCAACAAGAGCTCTCAACC TCGTCCATGGAGCTTTCCCAATGATTCTTGGTCATGGTGGTTTGGAGCTCTGCTCACGGGCCTATATTGTTGAAGCAAAA TGCTACCTTTGCGATACAAACTTCAACATCTTTGAAGATCACAACATTGTCATAGATTCACTGAGACAAGCATCAGAAGA ACTCCAGCTTCTGGAGTTTCATGAATTGGCAGCTGAAGCTTTCTATCTGATGGCCATGGTGTATGATAAACTGGGGCAGT TTGAGGAAAGGGAAGAAGCTGCAGCTTCATTTCAGAAACATACACTGGCTCTCACCAATCCTCAAGATCAGGATGATCCT CTTATTAGCACGTTTTGA
Protein sequence (LotjaGi1g1v0044200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MHISPLSRINVLVHATCFADASSSSDAALAYVKLIQHLAVFKGYKEAFSALKVAEEKFLFVSKSQILQLKLQLLHEHALH RGRLKLAQKLCDELSVLASPVTGVDMELKTEASLRHARTLLAAKQFREAAAVAHSLFCMCYKYNLQVQNASVLLLLAEIH KKSGNAVLGIPYALASLSFCTSFNLDLLKASATLTLAELWLSLGSNHATRALNLVHGAFPMILGHGGLELCSRAYIVEAK CYLCDTNFNIFEDHNIVIDSLRQASEELQLLEFHELAAEAFYLMAMVYDKLGQFEEREEAAASFQKHTLALTNPQDQDDP LISTF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 320 | 317 | 2.2E-117 | – | |
| PANTHER | 4 | 320 | 317 | 2.2E-117 | ||
| SUPERFAMILY | 105 | 296 | 192 | 1.52E-5 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Cellular component | Anaphase-promoting complex | A ubiquitin ligase complex that degrades mitotic cyclins and anaphase inhibitory protein, thereby triggering sister chromatid separation and exit from mitosis. Substrate recognition by APC occurs through degradation signals, the most common of which is termed the Dbox degradation motif, originally discovered in cyclin B. |
Expression pattern of LotjaGi1g1v0044200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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