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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0342100 |
| Transcript ID | LotjaGi1g1v0342100.3 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pentatricopeptide repeat-containing protein; TAIR: AT5G27460.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q3E911|PP400_ARATH Pentatricopeptide repeat-containing protein At5g27460; TrEMBL-Plants: tr|K7KJ76|K7KJ76_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0342100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:80425160..80435780) extracted from Lotus japonicus Gifu genome v1.2.
CGCGCGCCACAGATATTGCATCCCGGGGGTTTTGGTGGGGTTTTTACCAATCAAGACACCAGCACCGTGAATCGCCGACG CCGTAGCTTTCGATGGCGGCGAACCGCGCTCTCTCCGCCGCAATCAGACGGTAACGCCTCCCTGAATCTTCCTCTTACTC TAACCGTTCCCCCAACCCCTTCTTCAATTTCTGATGCCGGAAAATTTTGCAGCATAAGCTCTGTAATCAGCGCACGAACT CTATGGAGCTCCGCAGATTCTGGCGGTTCAGCATTCGCACACAACAACCACGACCTGAAGAACCTGATATCGAAGCTCAG ATCACCCAATCGGAGTCCATTAACGGCGCTTCAGAATTGGATCGACCAAGGCAACGTGGTTCCACCCTCCGAGCTCAGAC GCATCTCCAGAACGTTCCTCAAATCCAAGCGCTACCACCACGCACTTGAGGTTCGGTTTTCTTCTCCACTATTGCTGATT ATGGGTTCTTCCAATTTCTGATGAGCTTGTTGTTACTCATTGGCTAATTGCAATGCAATGTATGGATTTGATTAAGCAAT GTCTGTTCAATTCACTAAGCAATTTAAATTGGTTAATTATCACAGATATTGAAATGGATGGAAAACCAAAAGAATTTGCG AACGATCCCGGATGATCATGCCATGAAATTGGAGTTGATTATTGAAACATATGGTATAACGGAAGCTGAAGAATATTTTA GAAATCTACCTGACTCAGCTGCGAAGAAAGCGGCCTGTCTCCCGCTTTTGCGAGGCTATGTAAGAGATAGGGACAGCAGG AAAGCTGAGACTTTCATGGTGAAGCTCTATGAACTGGGGCTAGTGGTGAGCCCTCACCTGTATAATGAGATGATGAAACT TTATATTGCCACATGTGAGTACAGGAAGGTACCCCTTGTTATCCAGCAAATGAGACGAAATAAAGTACGCTGTAATGTTC TGTCCTACAACCTTTGGATGAGTGCTTGTGGTGAGGGAGAAGGATATGGGGTTGCAGCAGTAGAGAGAGTTTTTAGTGTG ATGCAAAATGATGAGAATGTTGAGGTGGGATGGAGCAGTCTTGCTACTTTAGCCAATGTTTATGTGAAAGCAGGACAATC TGATAAGGCTATTCAAGTTCTAAAAAATGCTGAGACGAAACTATCTACCTTTGGCCGTCTTGGTTACTTCTTCCTTATGA CAATATATGCCTCTTTGAAGGAAAAGGAGGGAGTCTTGCGGTTATGGGATGCTAGTAAAGCAGTTGCTGGAAGAATCAGT TGTGCCAACTACATTTGCATACTTACATGCTTGGTGAAGCTTGAGGATATAGTACAAGCTAAGAGAATCTTCATGGAATG GGAGTCTAATTGCCGGAAGTACGATATCAGAATCTCTAATATTCTTTTGGGTGCATATGTGCGGAATGGATTAATGGAAG AAGCTGAGTCACTGCATCTCCACACATTACAGAAGGGTGGTTGTCCAAACTACAAAACATGGGAGATTCTCATTGAAGGA TATCTCAATACACAAAGAATGGATGAGGCTATTATTTCCATGAAGAGAGCTTTAGCTATGTTGAAAGACTGTCATTGGAG GCCGCCGCATAGGCATGTATTGGCCATAGCAGAGTATTTGGAGAAACATGGGAATTTTGAATATGCAAACGAGTTTATTA CAGATATTCATAATTTAGGTCTTGGGAGTGTGTCATTGTATAAAATATTGCTTAGAATGCACCTTTCTGCTAACAAACCA CCTTTCCATATCCTTAAAATGATGGATGAAGATAAAGTCGAGATGGATAATGAGACCCTTTCCATCATTAAAGCCTTCAC TGGGTATGTAACCTCAAATCCACCAAGTTTCCCTGATTGCTTGTTGCAAGGTGCGCAACATTTTTTTCCTCTGAGAATAA TTTGTTTGTGGACATGTTCAGGCTGAAGTGCAAGGAGGTGTAGCAGTAATCTGGTGGTTCATTTTATTCATATGGTAAAT CATTTTTCATAGACATGTTATTTATTTTTATAGTCAAGCGCATTTCTAATACAACAAAAAAACCAACATGCAACGTTGTG ACATAAAACTCAGAAGGAAGGTTTCACTTCATTTACCTTATTCTTGAAGATTAGCAGTGAACTTGACACCACCATATCTA TATTCATATATTTTTGGAAGTTTCTTAGGAGACAGGAAGGAAGTAGCATTTGTAATTTATAGACATTCAATTCCTCTACT TTTCAATATAATAGTAATACGGTTTGCTGCAAAATGCAAATCAGTAATTTCAGTATGGCTAGCATAAGTTTTGGTAATTT CAGTTTGAATAGAGACAAACTTCTTCTTTGTGTTTGTTGATACATTATCATAATTGGCTGCTAACTTGCAGGAGCTAAAA ATATATCTAGGTTCCTCCATTCCTGTCATAATTTTTTATCATAAAGTTGCCCATTTTCAACTGTTCAATTATTCACACTA GAAATCTCTAAATGACAGTAAGAATTAATAACTTTAAAGCTTTTGGTATGTTTTCAGAACCTGAGAAAAAGGATGGCCAC CAGCCATTGGAGGGAAAGCTGAAGTCTGGTAAGGAATTTCTTCCTGATCCGCATTCCTTTTTGTGTTTGCTTTTTTTCCT CGATGTTTTTTTTTGCCTGTAAGGGCAAACATTTATAAATATACTAAATGAGATAACATCAGTAGTTATAACTTGCCATG AGAGAATGTTAGAGTGCTGGATTGCTACGGCAGATGTGTTCTAATTTATCAAGAGAGTAGACAAAAAAATCACATTGTAT TCCAATTACTAATTCAAAATAATTTTGAACGATATATCCCTGTACTTGTGTTACAATTTTTAAGGTGTTCCTTTTAGCAA ACTTTAAATTGGCTGGCCATACCAATTCTTAAGGTGTTCTTGACAAACGATTCTGTTCCTGTTAGGATAGTTTTGCTTGA CAAACAACTCCATATGTAAGCGGAGATTTTCATGTAACAATTATATGAAATTAGAACACAACACTTACGTGTTGAAGACA TGATTTTGGAGAAGAAGGATTGTTGTCCTTGATTAAATTCACCTGCAATGTTCAATGACCAGATCTTCCTCTGTATCTCA CACTCCTTTCACAACTCTCAATGGGGCAAGCTGTGGAGCAGACAAGTTTCTGGTGTCGTGATTATAGAAGGGACCTAGCC AAACATGTTATAACCCTAGTCCCTTCCCATTATGGGTTAAGGGTTATGATCCACACTTCAACCCACACCAATTAACTTAC AGATGCTCAGGCCCAATTAAAAGAGATCACATAACAAATAATAGAGCCCAATGCACCCCTGTCAGAATTATGAATTAACC CGTTTTTAACAAACAAAATAACAATTAATTATAGCCCACAAAACGTTAGATAAATCTAACATTCTCCCACCTGGGCAAAA TTAATTGTATGATTTTAATTTTCAAAAGCATGTGTATGAAAAAGACTCTCGGGTTAATAACTAATCTCTAAAGATGTGGC CACATCTTAAGAAAACGCATAATTCCAAGTGCAACGTCTGAGTACGACTTCGTCCAACAAAAGCCAAGTAATATCGAATC ATGACGATTATTATATCATCTATTGACATAAAACCTTCCATGTTTACAAATATCACCGACTCCGTCAACTAGTCAACAGT GTGGACCATAACCCTTGACCCATAATGGGAAGGGACTAGGGATATAACATGTTTGGCTAGGTCCCCTCTGTAATCACGAC ATCAGAAATTTGTCTGCTCCACAGCTTGCCCCATTGAGAGTTGTGAAAGGGGTGTGAGATACAGAAGAAGATCTGGTCAT TGAACATTGCAGGTGAATTGAATCAAGGACAACAATCCTTCTTCTCCAAAATCATGTCTTCAACAAGTAAGTGTTGTGTT CTAATTTCATATAATTGTTACATGAAAATTTCCGCTTACATTTGGTATCAGAGCCTTAATTATGAGTTAGGACCCAATTC GTGATTGATTGTATGATTTTAAAATCAATTCACTTTTCGTGAAATTAGAATCTCGAACATGCGTTTTTCATCTACCCTAT TTTCTTTCTCAATCGATCTGTTAATATTTTATTATGCACCGGCACCGTAAATCCTTTGTTCACGAACAAGTCTGTGTGTA TTTAATCATGATCGTTGGTACATGTTGTACGGGAGAAGGAGTCAATTTATCATACATTGTTTGTAGATGATTTTAGTTAT ATATGATAGCATCAATTTTATATGATATTGTGTACACAAGAAATAGCAATCAAATTTCTAGCATTGTAGAACCTACACGG GATTTAGATGGTTTAAAAACCATTTAGGTATGTATGTCCACTTTTATATGCGCGACTTGTATTAGGCTTGTCAAGAAACC AGATTATAAAACTTTCTCCTTCTGACAGTATTATATTGCATATTATATATATGATCTATGTATGCAACTTAGTAATTATA TAATATCCTCTTAATTGATTATAAATATTTACTTGAAATGTTGAGTACAAAACTGATTGGGAATGCTATATTGTTTGAGT TCATGGCTGACTCATGAATTCTGGGCAAAAGAAAATTTTGATTGTCTCTGATCATTGTGTACGATTGTCCTCCCCAAAGG TGGGTTCTTGTGTGTAGTGATTGAGGATGGCTATTGGAGGTACATTGGTCTAGAAATTTATCTGTCCAAAGACGATAAAA TTTTGATGTCAATGTATGTTCACTGAGTAGCTTATTCTTGAGATTTGTGGATGAAGTTATTGGAGGTGTTTTGGTTTAGG GAATCTATCTGTCCAAAGAAGATAGATTTTTGAACCCAATACATGTGCTCATTGAGTAACTCATCTGAGGTTCTGACCTT TGTTGCGACTTGGGTTTGCGCATTCCGCCCAAAGGGGAATGTGTAATGATGTTGGCCTCATCATAATAGCTTGTGTTCAT TAAAGCTATATCTTGCCCATATTTTTTGTTTTAATGCATTCCTGTTTTGTCTTAACAGTGAACTTCTCTGTGAATAACTG TTCTGCTTCTATTGAGATCCTGACTGGGTCCAATTATAAGAAATGGAAGCAAGACTTACACTCTATTTGATAGGGAAGAG AGAGATAGGGAAGAGAGAGTAGGGAAGAGAGAAGTTGAGTAGAAAGAAATAGGTGAGAAATAAAGTAGATTTAGAGGTTG TTTGGTATAATATAAAGAGAAGAGGGATAGAAGAGAAAGAATGAGGTGGAGGAGAGAGAAAAAAAAAATTTTATTGTGTC ATAACATTTCTGGCGGTTTTTGACTATTTATGGCAAATTGTAATCGCCAGAAATGTAAAAATATGTATAAAAACAACAAC TCTCCTCTCTCTTCTCATTTCTCTTCATTTTGGGGAGACCCAAAAATGTGGTAGGGCCCACCTTCTCACCTCTCTCTCCC CCCTCTTTCCCCTACCAAACAAGTGTGTTTCTCCTTTCTCTTCTCTAACTCTCTCCAACCTATCTCTCTCTTCACAAACT CACCTCTACCAAACAAAGCATTAGAGTTTTCATTAGGGATTGCTGACGTTGATGTGGCGTTGCTTGAGCCCAAACCTGTC GTTGATGCACAGAGTACACCTGATGAGGAAGAGAAACTTAAGAAAGAAAAGAGTGAATTAACTCTCTAACTGTCAAATAC TTCAATTCCAAGTGCTTAGAGCCATTAGTAGTTTTATTATTTTTAGTGTAGAACACAGATGCACTGTTAGGCCTAGCAAT GGAATCAACAATGTGAAGTCCAATCACCAAATTTCTCAACCAAACAGCATGGGTGGCAGCAGCATAACAAGCAATGAACT CTGCTTGCATAGTAGAAGAGGCAACAAGAGTTTGCTTCTTACTTTTCCAGGATTTTGTACCTCCAACTAGCATGAAAATG TAACCAGAAGTAGATTTCTTATCATCAAGGCATGTACTCAACTATTTCCAAGTTCTCAACTCTCCTAAATACAAGCATAT GCTCTTTTGTTCTCTGCAAGTATCTCATTACTTTCTTAGAGCAATCCAATGATCATTCCCAGGATTAGACTGGTATCTAC CCAAAACGCCAACTATGAAAGCAATGTCTGGCCTAGTGCATACATGAGCATACATCAAGCTTCCCAATGCACTATCAAAT GGTTTCCCCTTCATCTCTGCTCGCTCAATCTCATTTCTAGGACATTGATCTTTACTAAATTTGTCACCTTTAGTAACTGG AACATCCCCATGCTTACCAGTTTGCATATTGAACCTTTCTAGGACTCTATCAATATAAGCTTTCTGAGACAAGCCAAGCA GACCACGTGATCTATCTCTAAGAATTTCAATTCCCAACACAAAAGATGCTTGACCAAGATCTTTCATATCAAAGAACTTA GTCAGCATGTTTGGTCTCATGAAGTAGACCAAGGTCATTACTAGCTAGCAAAATATCATCAACATATAACACAAGAAAGA TGAATTTGCTCTGACTGACCTTAAGATAGATGCACTGATCAACTTTATTTTCTTCAAAGCCCAAGGAAGTCACCACCTCG TCAAATTTCAAGTACCATTGTCTAGAAGCCTGTTTCAAACCATAAATAGATTTCTTTAATCTACAAACCAAGTGCTCATT GCCACTTGTCACAAAATCCTCAGGTTGTTGCATGTACACCTCCTCACTGAGGTTACCATTCAGAAAAGTTGTCTTGACAT CCATCTGATGCAACTCCAAGTCAAAATGGGCTGCAAGAGCCATAATAATTCTAAAAGAATCTTTGGTTGAAACAGGAGAA AATGTCTCATTAAAATCAACCCCTTCTTTCTGTGTGAATCCCTTAGCCACAAGCCTTGCCTTAAATCTTTCAATTTTACC TTTTGAGTCCTTCTTTGTTTTGAATATCCACTTGCAACCAATCGCCTTACAATTCCCTGGTAACTCCACAAGCTCCCAGA CATCATTGTTGGCCATGGATTTTATTTCATCATACATAGCATCTGTCCACATATTAGATTGAGAACAAGTAATAGCTTCT TGATAATTCTTAGGATCAACAACATCACCAATATCATAAGCATCCTCGCTGAGATAAACCACAAAATCATTAGTGATAGC AGGTCGCCTTTGTCTAACTGACCTTCTAACAGGAATTTGCTCAATTGGCTCATCAAGTCGTGCAACCTCAACCTGAACAG GAGGATCAACCACATTCTCAACAGGTGATTGAACTACATTATCAACAAGTGGTTCAGCCACATTCTCAATGGGGGTAGCT ACTCCATGAGTAGTGGATGAGCTAGCATTATTAAAAACAGGTAGTGATATAGTTACAACACTAGGCATAAGAGAATCAAT ATTATCAGATGCAATGGCAGGCTCGGCTACATCAAGCTCAAGAAATTTTGCATGCATAGACTCCACAATTTTATTACCTC TATTAGGACAAAAGAACCTGTAACCTTTAGCGCGATCTGGATATCCAATGAAAAAACTCCATATTCCATACGTTACAACA ACACCAACAACAATAACAATAGCATGAGGGCCGTGTATAGAGTTTTTGGGGCCTAAGGCGAAAATATTAAAGTGATTTTA TTTTGACAAGTATTTTAAAAAGACATGATATATCATATCAACTTTCAATTTTTTATATTAACCTTCTAGCTTTTTGAGTT GCAAAATCATTTATCAGAGTTTTATACAGTAAAATAAATAAGAAAGTTATGAACAATAGAACCAGGAACACAATGAATAA AACCATGTGAGATTTTGCTACATTTTAAATTCAAATATCTCATTTAATAATTCACTTCAACGTGAAAAGAAAAAAAAATA GAGAAGAAATAATGAGTGAAGTCTGTGAAAAACATTGTATAATACTATAGATACATAAGTCATAAAAAAATAAACTATGA TAAGTAACACAAATTAATTTTTTCAATTTTGAGAATGTAAAAAGAACGGATATTTATTTACTTATTTTTTGGAAAATGTA AATTTGTTGATACAAAATACTACTACTAATAACTACCAAAGTTGCACTTCTAAGTTCTCACATTGCATTTCCTCTGTTGC CATTAATATTACTTAATTTAATATTTTTTTATTACATTTCTTAAATCTTAGTAGTATATTCTATATGTACTAATTTTTTT GGGGGCCTTAAATATATTGGGAGGCCTTAGGCAATTGCCTAATTGACCTAGTGATGTACACGGCCCTGAATAGCATTATC CCACTAAATGAGATCCATAATTCCATTTGTAACAACTGTTTTATACGTTTGAAACATGAGTTGGTTATACCTAGTGTTCT GCATAAACAAGTGGTCTTTTACTGTTGCATTGGTGCTGGAGACTTTACTGCATTATCTATACTGGCGTCGTTTGTTTCAC ATGGCTAAATGTTCGTTTCCCATTTTTTTCATTATTTTTAGTGTGGCTAATTATTTATGGAGAATATTGTTTATTACTTG GTGTCTAACAGGTTTGATATGAATTTATATCTTTATGGAATGGTTAAATTTCTATTACTTGCCTGCAATATTAAATTGGT ATGGCCAGCCAAGCAACCAAGATAGATGTTATACTCGGGCTGTGGCGACTGGTGAGAAATAAAGCCAATCTTGAATTCTC TGCTTCTCTTGTAGTTTTTTTTTGTGTGCCTCTTTTATATTTTTTTGTTCATTCTCATGCATTTGTTTTTGGTTTGCAGC TCTGCGTTTAATGTTCATCTCGAGGTGCGTCTAATGTTCAGCTTGAGGTACGTAGCCAAAATACTCTGCAGTGTATTTTG GGAAGAAATCTGAGTGTCTATATGGATTCACAACAAGCACAAAAACCAATCAAGTTTAGTGTAAAAGTTATGTGCTGTAT CTTCATTTTGAAGTGACTTTAGTAAATTTTAAAGTGAATCCAAATATCTATTATGAAGAGCAAAGTGCAAACTACTTTAT TACTGAAAATTTTGGTTTTTATTGTATTCCCATTGCCTAGGATACACATTTTCTAATGATAATACAAGTTCTGTTCACTT TTTATTTCGAAGTGAGAGTTAATGCTTGTTTGCACTAGTGCTGACTGTTGAATAATAATTCAGTTCCAATTAGACTTGGT AATTATTGTTAGTTGTGTTAAAGCTTGATTAGTTGTTTGCTTTAGAGTTAGTTGTGATTAGTCAGTTAAACTGATATTAT AAATACTAATTGCTTTGTAATTCTGTTACACACTGTTAATGAGAATTAGATAACATTCTCTCTCAAACTTTTGTTCCTTC CTCTCTTATCTTTCTCTCGAGTCTCAACACTGTGTGTGTGCTTCTGTGAACACTGTGTGTTCTAGCTACCACTGGTTCAA CAGTGCAATTCAGATTGGAGATAGTTTCAACACTAACTATAACCCAAACATAGCCTTCTTCTAGATTTCTAATTTACAGC ATGATAGGTTTGCCATGAGATCATAACCATGATTATTTATGGTGGTACACATCTAACATGAACTAACCATATAATCATAA CCATTATTTATAGATGTCGCGAGCCCTTTCAAGTGGATGAAGATGTCAATAACTTGTGGAAGGCCTTCATGTGCTCAAGC AGTTTATCATGAGGTGGTATGGACTCTTTGATAATAGGAAGCTCAAGAAAATCATCACACCAAGCATTAAGCTTAGCCAT TGACACTGTATCAATTAGGTTTATGCCCACTGTTTCTTCCACCAATCGAATCCAATATCCAAGAAATCCAATAGAAATAT CAGCAAAGCCTATTCCTTGGCCTCCAAAGTAGCGCTTTCCCTCAAGTCCACTTTCAAGGGTCTTCAGAATCTCTCGAGCT TCTTGTGCTGCTTTCTGTTGTTCCTCCCCTACTTTGGAAAATGCCGCCATAAGTGCTGGCACACACTGAAAATAAGAAAA GGTTGTATTTGTATTAGAGGTTGAATGTTTAAGACATTTATTTTTGGTCTAGTATGGTTCTCCTTCACAGGAAGGATACT GTTCGAGTCGGGAATATCCATCTCTCGGTGGGCTTAGCTCTAGTTCTCCCAGTGTGAGCTTTTCCCATACGCAAAAGTCG CGAACTCAAGATCTTACCCCAGGAAAATCAAGCATGCTTACGAACCACATTTCTTACAAAATAAGTAGTGCACATAATAC TAATGCACTTTATTACCTTTTCGTCAGTGAATCTGGACCAGAATCTGGCCTTGGCTCTTTCATAGGGATCATGTGGAAGA AGAGGATTTTGCTTCCAGGTCTCATCAATATACTCAAGAATCACTAGTGATTCTGCCAGAGGTTTACCATCATGCACAAG AACTGGTACCTTCTTGTAAACAGGGTTATACTTCAGGAGCATGACACTTTTGTTGCTGAGATCTTCTTCCACATATTGGT ACTGCACCCCCTTTAGTTCAAGAGCCCACTTGACCCTGAGCATAAATGGACTACCCCAGAACCCCATTAATGTGACTGAA TCCCCTGACATTTTTGTTTTCTAACCAAATTCTTGAAGCTCTCCCACTCGCAGGTCCTCTATATACTATAAGAATAAGAG TATTGCTTATTTATAATAAGATATTATTAACCAATCAATCTGAGTGAGTGGCATATACTAG
CDS sequence (LotjaGi1g1v0342100.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGCGAACCGCGCTCTCTCCGCCGCAATCAGACGCATAAGCTCTGTAATCAGCGCACGAACTCTATGGAGCTCCGC AGATTCTGGCGGTTCAGCATTCGCACACAACAACCACGACCTGAAGAACCTGATATCGAAGCTCAGATCACCCAATCGGA GTCCATTAACGGCGCTTCAGAATTGGATCGACCAAGGCAACGTGGTTCCACCCTCCGAGCTCAGACGCATCTCCAGAACG TTCCTCAAATCCAAGCGCTACCACCACGCACTTGAGATATTGAAATGGATGGAAAACCAAAAGAATTTGCGAACGATCCC GGATGATCATGCCATGAAATTGGAGTTGATTATTGAAACATATGGTATAACGGAAGCTGAAGAATATTTTAGAAATCTAC CTGACTCAGCTGCGAAGAAAGCGGCCTGTCTCCCGCTTTTGCGAGGCTATGTAAGAGATAGGGACAGCAGGAAAGCTGAG ACTTTCATGGTGAAGCTCTATGAACTGGGGCTAGTGGTGAGCCCTCACCTGTATAATGAGATGATGAAACTTTATATTGC CACATGTGAGTACAGGAAGGTACCCCTTGTTATCCAGCAAATGAGACGAAATAAAGTACGCTGTAATGTTCTGTCCTACA ACCTTTGGATGAGTGCTTGTGGTGAGGGAGAAGGATATGGGGTTGCAGCAGTAGAGAGAGTTTTTAGTGTGATGCAAAAT GATGAGAATGTTGAGGTGGGATGGAGCAGTCTTGCTACTTTAGCCAATGTTTATGTGAAAGCAGGACAATCTGATAAGGC TATTCAAGTTCTAAAAAATGCTGAGACGAAACTATCTACCTTTGGCCGTCTTGGTTACTTCTTCCTTATGACAATATATG CCTCTTTGAAGGAAAAGGAGGGAGTCTTGCGGTTATGGGATGCTAGTAAAGCAGTTGCTGGAAGAATCAGTTGTGCCAAC TACATTTGCATACTTACATGCTTGGTGAAGCTTGAGGATATAGTACAAGCTAAGAGAATCTTCATGGAATGGGAGTCTAA TTGCCGGAAGTACGATATCAGAATCTCTAATATTCTTTTGGGTGCATATGTGCGGAATGGATTAATGGAAGAAGCTGAGT CACTGCATCTCCACACATTACAGAAGGGTGGTTGTCCAAACTACAAAACATGGGAGATTCTCATTGAAGGATATCTCAAT ACACAAAGAATGGATGAGGCTATTATTTCCATGAAGAGAGCTTTAGCTATGTTGAAAGACTGTCATTGGAGGCCGCCGCA TAGGCATGTATTGGCCATAGCAGAGTATTTGGAGAAACATGGGAATTTTGAATATGCAAACGAGTTTATTACAGATATTC ATAATTTAGGTCTTGGGAGTGTGTCATTGTATAAAATATTGCTTAGAATGCACCTTTCTGCTAACAAACCACCTTTCCAT ATCCTTAAAATGATGGATGAAGATAAAGTCGAGATGGATAATGAGACCCTTTCCATCATTAAAGCCTTCACTGGGCTGAA GTGCAAGGAGGTGTAG
Protein sequence (LotjaGi1g1v0342100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAANRALSAAIRRISSVISARTLWSSADSGGSAFAHNNHDLKNLISKLRSPNRSPLTALQNWIDQGNVVPPSELRRISRT FLKSKRYHHALEILKWMENQKNLRTIPDDHAMKLELIIETYGITEAEEYFRNLPDSAAKKAACLPLLRGYVRDRDSRKAE TFMVKLYELGLVVSPHLYNEMMKLYIATCEYRKVPLVIQQMRRNKVRCNVLSYNLWMSACGEGEGYGVAAVERVFSVMQN DENVEVGWSSLATLANVYVKAGQSDKAIQVLKNAETKLSTFGRLGYFFLMTIYASLKEKEGVLRLWDASKAVAGRISCAN YICILTCLVKLEDIVQAKRIFMEWESNCRKYDIRISNILLGAYVRNGLMEEAESLHLHTLQKGGCPNYKTWEILIEGYLN TQRMDEAIISMKRALAMLKDCHWRPPHRHVLAIAEYLEKHGNFEYANEFITDIHNLGLGSVSLYKILLRMHLSANKPPFH ILKMMDEDKVEMDNETLSIIKAFTGLKCKEV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 27 | 27 | - | – | |
| PANTHER | 16 | 504 | 489 | 7.8E-247 | – | |
| PANTHER | 16 | 504 | 489 | 7.8E-247 | – | |
| Gene3D | 65 | 226 | 162 | 2.0E-8 | ||
| ProSiteProfiles | 139 | 173 | 35 | 5.908 | ||
| ProSiteProfiles | 174 | 208 | 35 | 6.741 | ||
| Pfam | 176 | 222 | 47 | 4.7E-4 | ||
| ProSiteProfiles | 209 | 241 | 33 | 6.149 | ||
| ProSiteProfiles | 247 | 277 | 31 | 5.7 | ||
| SUPERFAMILY | 250 | 446 | 197 | 6.17E-5 | ||
| Pfam | 253 | 272 | 20 | 1.3 | ||
| Gene3D | 256 | 442 | 187 | 9.9E-20 | ||
| ProSiteProfiles | 317 | 347 | 31 | 5.053 | ||
| ProSiteProfiles | 352 | 386 | 35 | 9.01 | ||
| Pfam | 357 | 376 | 20 | 0.004 | ||
| ProSiteProfiles | 387 | 417 | 31 | 6.149 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0342100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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