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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0422700 |
| Transcript ID | LotjaGi1g1v0422700.3 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 26S protease regulatory subunit; TAIR: AT1G45000.2 AAA-type ATPase family protein; Swiss-Prot: sp|Q9MAK9|PS10B_ARATH 26S protease regulatory subunit S10B homolog B; TrEMBL-Plants: tr|B3H533|B3H533_ARATH AAA-type ATPase family protein; Found in the gene: LotjaGi1g1v0422700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:91684228..91689103) extracted from Lotus japonicus Gifu genome v1.2.
ATGACTGACGCAGCGGAAGACGCCGTGCGACGCCGTACCGCGGTGGCGGATTATCGGAAGAAACTTCTTCAGCACAAAGA ATTGGAATCCAGAGTGCGATCCGGTTAGTCTCTTAATCGATTGTACTGCAATCTAGGGTTCCTTCCCCCTGGTTGAGAAC ATAAAAATTCCTTCTCGCTTTTCAATTTTTGCTTCGTCTCAGTTTTAGGGTTTGTGCTCCAGCTCCTGGGCTTTTGTATG CATTCGTTTGCTTGGTCTCTGAAAACCCTATTGTCTTGCTTGATTAGGGTTTAATTTGTTTAGGTGAGAAATTTCTGTGG TTTGTTTGAGAATTTGACCAATGAGAAATGTGGTTTTGATGGTTTTACGTGTGTTTCTGGAATTTAGGGTAAGGTTATCA ACTGGATCTGTTTTCAAAACCACTTTGAGGTTCTTCTGTTGAAATAATAGTAGTTTCATTATTGAGCAACGAAACCGCGA GACCAAAGGGGCATGACTTTCTGAGCTAGGCTGTTCATGGCTAAGCCACAATGTTCATTCATGAGCATGCCCTGTGCTGT TCAAAATTGGAAATTCCTTAATCAGCTGCTTTAGCTTATGATTTTATGTTAACAGTCAGTTTCACTAGTTTCCAGTCTCC TTTTATTTCGTGTACTTGAATCCTAATGGATGAGAATTGTGACTTTGGTTTCAAACTGAAATTGCAGTGAGGGAGAACTT GCAAGCTTCGAAGAAAGAGTACAATAAAACTGAAGATGATTTGAAGTCTCTTCAAAGTGTTGGGCAGATAATTGGCGAAG TTCTCAGGCCTCTTGACAATGAACGCTGTAATTATTCTAACCCTTTCATATTTGAATTATATCTCATGGCATCTCATTAT GGAACTTCACCCTTCCTCACTACATCTATATTTAGGTCGTCTCTGTTGGAAACATGGATTACCTGCAAATTGTGTTAGAA TAGTATATCTAGATTATTTGCATGCCCAATAAACAATCCTTACTGTTTTCTTGATTGTTTTTGTTATTTCAGTGATTGTT AAAGCAAGCAGTGGACCCAGGTATGTGGTTGGCTGCCGCAGTAAAGTGGATAAGGAAAAACTGACTTCTGGTACTAGAGT GGTTCTTGATATGACAACACTCACCATAATGCGCGCTCTGCCCCGTGAAGTACGTTTTCAAAGTTTATTCTTTTCATAGT TTTATTTGATGAATGTGTTTGTGTCTTGTTGGGCAAATTGTTTTGGGTTACTGTTATTTCTCTAAATTATCTGTTGCTTA TTGTGCTTGCTTGCCACTAATATGTTTCAATTGAGTTGCCAGGTTGATCCCGTCGTGTACAATATGCTTCATGAAGATCC CGGTAATGTTAGTTACTCAGCTGTTGGTGGTTTATCCGATCAGATCAGGGAATTGAGGGAATCAATTGAATTACCTCTGA TGAATCCTGAGCTCTTTCTTCGAGTTGGAATTAAACCTCCCAAGGTAACTTTTTATTTACTACCTTTTCTAGTCCCTAAT CTATATTAGTGTGAACATGTGATTTTAGCAGCATGTTCATCTAAATCTCTACATTTATTTTGGAAGCATTTCTTATTAAG CCATACTTCTAAATTTTACATTTGATCAGAGCATCTTCTCTACTCTCTCATCTTACAGGGTGTTCTTTTATATGGACCTC CTGGCACTGGCAAAACATTGTTAGCTCGGGCAATTGCCAGTAATATAGATGCGAACTTCCTAAAGGTCAGATTATGTTTC TTTTATTGATTCTGTGTGTTTTAAAATGTCCTTTATAATAAACTGTATTTCACCTTCCCTTCATTCGAATGCAGGTGGTT TCAAGTGCCATAATTGATAAATACATTGGAGAAAGTGCCAGGTTAATAAGAGAGATGTTTGGGTATGCACGTGATCACCA GGTGCGATTCTTGTGTTGTCTTTTGACTGGTTTATATATACAACATTAGAAGTAGTTTTAATTCTCCAACTTTTTGTGTA GCCCTGCATTATTTTTATGGATGAGATCGATGCCATTGGCGGTCGTCGTTTCAGTGAGGGAACAAGTGCAGATCGTGAGA TTCAGAGAACACTAATGGAGCTGCTTAATCAACTTGATGGATTTGATCAACTAGGGAAGGTATATTTTATTCCTCAATTC CTTTTAAATTGATTTAGAAATAGCCATCACGCTCGACTTTTAGAAAAATTTAAAGACATTGTACGGTTCTTTTCAAAACG TCTTTGAACTTGCATCTTACCAAGTTTCATATTCAAAATGAATGTGCTGTGAATTGTTACAAACCGTGATTACCAACAGA AGAATAGAATGGAAAATCTAAAGAACAAGAATAGTTCTCCCCAAAGGTTTGCTCTTCACAGAAGATTTGTCTCAACTATA CTTGTTATCAATATCGCCCCCTTGAAATAGTAATTCCCACTGATAATCATTGCGTAATGCTCCCTCCCCCTAGTTCTTGA CAATCTCCACATACCTAGTGACTTGTTTACCTTCTGCCAAGATCATAATCCTCATATATTTTTGGGTGCTTGTGCTTGGG GAATAATGGTAGGCCCTACTGGAAACATCTCCCTTCTTCCTGCCTGTATTTATCATAAGGAAGTTGTCGGGTTCCTCTAT TTCTGGATGGGAGCATTAGTAGTGTTGGATTTTGAGGGCAACCGAGGTGCAACACCCCTTTTCTTCCTTGCTGACCCCAT CATTCTAGCAGAATAATGGCTTGTGCTCAAAGTATTCTTGAATGACTCTGATAAGAACCTTGAGAGAACCACACCACAAA ATCTAGCTGTTGTAGTTGGAGAGCCCTAGGCCTTATAAACCCCACATTAGAATCCCATACTTCCAATGTGGAACTCAAGT CCCGTACCTTGCAATTGGGCCCTAACAGACTCAGATGACCCTTGCTCTTGAGTTGGGCTTGGTGTGCCCGATAGGTTTAT GCCAATGAAAGAAACAACTGTCCCCCCTCCTCAATAACGAGATGCTCTGTTTGGAGCTGGACATTTCCTCCCCTACATCA CTGGCTAAGTTGATAGCCTTCATGACATTCTTTGGAACTTGGGTGCGCATCCTACATTGGATTTGTCTTCCATTCGACCC ATGAAGTAACACAACAGCTGCTCTTCTATCATCGCTGCCGCCTGTCCGGTCAAACACTTCAAACTCTTGAATGTACTTTT CCACTGTCACTGATTAACTCAAGTAGTCGCTTTTACACATTTCCCAAGTTTTTCCCTCCCAAATGTCGGCTTAAGGCTGC GGTTAGGCCTACCCATGGCAGCGCTTGATTCATTCTCTTCTAGAATCGAAACCAATCTTAGGCTGCACCTTCTCTCTACG GCTTTCATTATGTGAATCTGAAAGAACTTCTCAGCCCTCAGAATCCACCTCAAATGGTCATGGCATTCGAAAGTGGGTAG TTCCAAGTTTCCACCCAAGGTTGATCACTCTTGTTCGTGTCATTAGAGCTGCTGACCTCTTGGTTCCCATTGTCTGATTT GTGTTTAGGCAATAGGGACCTCACCACCCACAAGTTCGTCTTGTGTATCGAGATTGTTCTCCCAGTCAGTACCGTGCTTC TGCATCCACAGCGCAAGACACTTATTAACATCAATGGCTACCACATCCTTTCTTATTCCAGCAAATTGAGAATCTTAGAA AACTGAGTACCTTATTCACTAGCCAATTCTTGAGATACTCCGAAACTTGCAAGGCTGCAATTGTCAACTCTGTTGCTTCC ATTGGACCAAACTTGTTATGATCCATTTTTAAGAAACGAAGAATAGAGTGGGCGATATGAATCCTTTATTGCTGAATGAA ATCTGAACAGAAATGGACAATGGATTTCTCCCCAATGTTTCTCCTTCACAAAGGATCTCTCCTTTCAAAAAAAAAATCCA AATGCCCCCATTTATTCTGGCTACCCTTGTTTATCTCACCAATATCTTCTAACTAGTGTGGACTAACCGTTGTCCTTGTT CTGTCTCAACAATCCATCTCAGCATGAAATGAACCACGCATTGACAATTTTTCAAACAAATGAGTTGCTATTTCATGATA TTTCCTCTTTGGTAACAATGAAGTAAAGTTTAAACCTATCTTCATAGATGCTTTTTAAGGTGTGGAATATTTAGCAGAGT TTTTCTTGTAAGATATAATTCGCATGAAATAAATATATAAGCACCGACCTTTTTCGTTGATACATTATTGTGGATAATGT GATCGAATAATTTTTTCCTCTAAAATACTGTTTAGCAGAACTGTAATTGTGGATTGATGATGACATAGCTGTCTGTACTT ACTTTTTAGGTAAAAATGATAATGGCAACAAACCGACCTGATGTACTTGACCCTGCTCTCCTGCGTCCTGGGAGATTGGA TAGAAAAATAGAAATCCCATTGCCAAATGAACAATCACGTATGGAAATTCTCAAGATTCATGCCGCTGGAATTGCTAAGC ACGGTGAAATAGACTATGAAGCTGTTGTGAAGCTTGCAGAGGTGAGTCTAGGTGCCTTGGATTATTAGTTTTACTAACTA CGTGTACATGTATGACATTAATATCCTGTGTGTTAAAAAATTTCAGGGATTTAATGGGGCTGATCTTCGGAATATCTGCA CGGAAGCTGGAATGTCGGCTATTCGGGCAGAGCGCGACTATGTGATCCATGAAGATTTTATGAAGGTGAGCGCTGTTCAG GAAACAATTTTTCCTTGGTATTTATTGATCATACTACAAAGGGTGTTCCTCTCCTTGTCTCTTACAATTACTTTTGTACA GGCTGTTAGGAAACTGAATGAGGCAAAGAAACTTGAATCTAGTTCACACTACAATGCTGATTTTGGAAAAGACTAG
CDS sequence (LotjaGi1g1v0422700.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACTGACGCAGCGGAAGACGCCGTGCGACGCCGTACCGCGGTGGCGGATTATCGGAAGAAACTTCTTCAGCACAAAGA ATTGGAATCCAGAGTGCGATCCGTGAGGGAGAACTTGCAAGCTTCGAAGAAAGAGTACAATAAAACTGAAGATGATTTGA AGTCTCTTCAAAGTGTTGGGCAGATAATTGGCGAAGTTCTCAGGCCTCTTGACAATGAACGCTTGATTGTTAAAGCAAGC AGTGGACCCAGGTATGTGGTTGGCTGCCGCAGTAAAGTGGATAAGGAAAAACTGACTTCTGGTACTAGAGTGGTTCTTGA TATGACAACACTCACCATAATGCGCGCTCTGCCCCGTGAAGTTGATCCCGTCGTGTACAATATGCTTCATGAAGATCCCG GTAATGTTAGTTACTCAGCTGTTGGTGGTTTATCCGATCAGATCAGGGAATTGAGGGAATCAATTGAATTACCTCTGATG AATCCTGAGCTCTTTCTTCGAGTTGGAATTAAACCTCCCAAGGGTGTTCTTTTATATGGACCTCCTGGCACTGGCAAAAC ATTGTTAGCTCGGGCAATTGCCAGTAATATAGATGCGAACTTCCTAAAGGTGGTTTCAAGTGCCATAATTGATAAATACA TTGGAGAAAGTGCCAGGTTAATAAGAGAGATGTTTGGGTATGCACGTGATCACCAGCCCTGCATTATTTTTATGGATGAG ATCGATGCCATTGGCGGTCGTCGTTTCAGTGAGGGAACAAGTGCAGATCGTGAGATTCAGAGAACACTAATGGAGCTGCT TAATCAACTTGATGGATTTGATCAACTAGGGAAGGGATTTAATGGGGCTGATCTTCGGAATATCTGCACGGAAGCTGGAA TGTCGGCTATTCGGGCAGAGCGCGACTATGTGATCCATGAAGATTTTATGAAGGCTGTTAGGAAACTGAATGAGGCAAAG AAACTTGAATCTAGTTCACACTACAATGCTGATTTTGGAAAAGACTAG
Protein sequence (LotjaGi1g1v0422700.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTDAAEDAVRRRTAVADYRKKLLQHKELESRVRSVRENLQASKKEYNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKAS SGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLM NPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDE IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKGFNGADLRNICTEAGMSAIRAERDYVIHEDFMKAVRKLNEAK KLESSSHYNADFGKD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 278 | 278 | 1.2E-208 | – | |
| PANTHER | 1 | 278 | 278 | 1.2E-208 | – | |
| Gene3D | 24 | 132 | 109 | 1.3E-32 | – | |
| Coils | 25 | 59 | 35 | - | – | |
| Pfam | 63 | 118 | 56 | 6.0E-10 | ||
| Gene3D | 135 | 274 | 140 | 3.2E-48 | – | |
| SUPERFAMILY | 136 | 320 | 185 | 4.57E-44 | ||
| CDD | 142 | 270 | 129 | 4.71955E-19 | – | |
| SMART | 172 | 311 | 140 | 9.0E-10 | ||
| Pfam | 176 | 276 | 101 | 8.6E-30 | ||
| PANTHER | 277 | 335 | 59 | 1.2E-208 | – | |
| PANTHER | 277 | 335 | 59 | 1.2E-208 | – | |
| Pfam | 278 | 310 | 33 | 9.3E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
Expression pattern of LotjaGi1g1v0422700.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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