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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0704400 |
| Transcript ID | LotjaGi1g1v0704400.1 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pre-mRNA-processing factor 39; TAIR: AT1G04080.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q4KLU2|PRP39_XENLA Pre-mRNA-processing factor 39; TrEMBL-Plants: tr|K7KFI9|K7KFI9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0704400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:127254356..127264837) extracted from Lotus japonicus Gifu genome v1.2.
GGCCACGAATCCTGGAACCCTCGACCAACTTGCCGCGCCCACCAGCCCTATCACTCTAGGTTACCAAATAACCGAAAGCC CATTCCCCAATCGTCACTCAATCCCCACCGCACAACTAATCACACCATCCAACCAACGGTCCAGATCCCCGCATTATCCA TCACGCACGGTACCAGATGTAACAGCAGCATGACATGCCATGGAGCCGCACCATCACCATCTTCTCCACTGATATAAACC AAGCACCCTTCATTCGGTTCCCTACTTCGAAATTCCACTTCTCAAATTTCCCCCAAAAACCGAAGAAGCAGGGTTTCAAT CTTCTTCACTGCAACGAAGCGGTTAATCTCCATTTCAGGTAACTCTGAAAATCTCAACCACTCTCGATTAGGGTTTAGCG TCTCAAACCCTAGCGATAGCTATTTGCTCAATTTGAAATGCTGTGTTCTGATGATTTCTGCTTCAGATTCTTGCTGTTCT TGATCTTGCATTACGAATTATTTGATATTTGTGAGATTTGTGCAGTTCTAGCACTCTTGAACTAGTTTTTGATTGATTTT TTGGTTTCGTTTTGTTACAGTATGGGAGATAGTGAGACAGTAGTTGCTGATGCATCTGCGGCGGAGGCGTATGCTGCTTC TGCTTCTGCTGGACATGCTGACACCGTCATGGATCCTGTTCCTGAGGCTGGTGCTGCTACTGGAGAAGCTTCTCAGGCTA ATTCTGCTTATGGATATGGTGAGGGGAATGTGTATGCTAGGGATCCTAATTCCGGCCAGTTGGGTGGAACCGGTGATTCC AAGCAAGCTGCTGGAGTTGTCGATGCTAATGAGGCTGGAAATGCGGCTGCGGAGAATAGTGTAGTTCCTGAATACAACTC AACTGCAAATGGCAGTGTAGTGACAAATGCTGCGGGACTTGAAAACGGGAACGCGGTGGACAATGTTGATGGGTCAGCTG ATGAGAAACAGCTTGCAGATGGTTATGGTATGGTTTTCTATGCTACCTACATATGTTGAATCTGCGAGTAAAGTTGTCCC ATGTTAACTGTTGTTTACATTTTGTAAAAACAAAAAAAACAAGAAAATGAATAAACTGGAGTTCAATGATGGTGCAGAAC TTGTAGGTGTATAATCAAGAGTCACAGTTTTAGTTGTTTATTAACTAGCGTGTATTTAATTAGTGTTGCATGCTATATTT TTCTGTTTCGGCAACTAGTGATTTTACACCATAATTGATAGAAAAGAAAAAGAAGAGATGTTATATCTTCAATGGGAGGA AGCATTTTTTCATGCAAAGAAGGTGGATTTTAAGGCTGTATTGAATATCTGGTCTAGTTTACATGTTACTATCAACAGGA TTGTTTGTAGCCAGCATCATAGGACTAACAGAATAGTTATATAATGTAATTTCCATTAACTTCAGTTTCAAGTGACTTAA ACTTATGACATGGATCTCAATCATTGATATGATGAATTAGCTTATTTTACACATAAATAACTTTGCATCTTTGAAGAATT CCTTTAAAAGGTGTACTAGTTCAGGATGACTTATGAATTTCGTTTCATAGTTTGGAGAACATATATATTTTGAGCCACTT CTGCAACTTTATTTCTCTCATTTATTGTAAGAAATATAAATTGATGCTGAAACTATACTTTTCAAGGATGTCGTTTTTTC TTGTTTTCAATTTTTAATGAACATGATGTAATCAAACCTAATTAGTGATTTTACCCTATTCGTTTTCTCACTGTTAGCAG CTGCCTTGTCTGCTGAAGAAGATCGACTGTGGAATATTGTTAGTGCTAATTCTTTAGATTTTACTGCTTGGACTGCCTTG ATTGAAGAGACTGAGAAGGTGGCAGAGGTATGTTTTATTAACCTGTATTTTAGGATTTGAATTATCTGTTGGGATGTGTT AATATCTGTATATTTCAGCTTTGGTATTGACTGGTAGAATTGGATATGTCTATAACGATTAACAACATTGTCAACTTCAG AGATTTATGATGCAGCATCTTGTTTGAATGTCATTTGTGTATAAATTGATGTGATTACTTTTCTTTTTCTTAGGGCAGAG TTGGGTGGGTGGACTGTTAATCTAGTCTCTCTTTATTAGGTTTTGTTGTGATTCAAGCCTGATTCAGCCCAATGGATGTG ATGTTTCCTCTTTGATAGTTCTCTGATAATTTTGTTCATCCCGTTACTCTTTAACAATAAGGATGAGGCAATATTACATG GACGGATTTAAATAACTTACTGGTTCTCTATGTTCTCAGATTAGTTAAAATATGACATGCATGCTATTAAAATGGTACAT ATTATGTTTGCAAAGGCATAGACAATCTGTATTTATAAATATATGTTTCATTTTGTAGTCTCAATTAAAAATGTCTTTAA TGTATTTTCATTTTATTGGGCAATTTCTTCGGTGTTTGCTTTTCCCAATTGATATTGAGACAACAAAGTTCTTGGGTTTG TAGCATTTCAGAAAAAATATGTTCTGGTAATTGTACCACATGACATCCTTTTTTCTAGCTTATTTTGTGAATGGTTAATA TTCTGGCAATTATATTTTTATTTAACATTTAATGTTATGAATTTTATCATTGTTCTCCATGTATTTGAATTCTGATACTC TTGAAGCTCATTTGTTAATAATTTCCCTATTGAAGGACAACATCTTGAAGATTAGAAGAGTCTATGATGCTTTTTTAGGA GAATTTCCTTTGTGTTATGGTTATTGGAAGAAATATGCTGACCATGAGGCACGTCTTGGCGCTGTTGATAAAGTTGTTGA AGTGTATGAGCGTGCTGTTCAAGGAGTTACATACTCAGTGGATATGTGGTTGCATTATTGCATATTTGCTATAAGCACAT ATGGGGATCCAGACACAGTTCGTAGGTAATGGATGTTTCAGTATTTGTTACATTTTTAGTATGATATTATTTTCTATTCT CTAGGCTCAGCTGTTCCTTGCCTGCTTTCTAACCTAATTTCAGAATACGTGCGACAGTGATATCTCCCTTTTATGGCGGA AAAGCTTTGATGGGATTGCATGTCAGAATGCTTACCATTCTGATGTTTGAATCCTTGGTTTTGATTCCACTATAAGTGGT AGTTGAAATTTTTAGAATCATTTTCCCCAACATACTTTTCCATTAAGTTCATAGTTCTGTAGTAGGGTTCTTCCCCCTCC CCTTTCCTGTTGGAATGGTGGCTGTTTTTACCTTTGACAATTTGAGGTGCATCAATTTGCAAATTGCTGCTGGAAGATCT CGTCTGGTTAAGGGCTAGATGGCCTCTATGACTGCTCCATTTCTCGGACATAGTATGATTTTTTGCAGGAAGGTAAATGC AGCGTTTGGATGTCTTATATGATGTTACGAGTGATTTGTTTGTTCCCCTTGAACACTAGTGCTGCTGTCTCCCACACATG GATGTGCATTAGTCTATAAATGATCTAGTCACACATGTTAGCCATAACTGTATGTTCATATATTTCAGGCTTTTTGAACG AGGATTAGCTTATGTTGGAACAGATTATCTTTCTTTTCCTCTTTGGGATAAATACATAGAATATGAATATATGCAGCAAG ACTGGGCCCGCCTTGCCATGATCTACACCAGAATATTGGAGAATCCAAATCAGCAGCTGGATCGGTATTTTAACAGGTGA TTTCTTGTTTTGATTTTATTACCCTCCCCTTTAGTTTAATTATTATTGTATTTTGCATGTATGCTCTTTTCTTACATTTT GTTTGGGTAATATGACTCCTTCATGGAAATGGTGTCGCAGCTTCAAGGAGTTAGCTGGCAGTCGACCATTGTCAGAATTA CGGACTGCTGATGAAGCTGCTGCAGTGACAGGTGTTGCTTCAGAGGCTACTGACCAACCTCTTGAGGGAGAGGACCGTCC TGATGGTGCAGAGATTTCTCCTAAACCTGTAAGTGCTGGCTTAACAGAGGCAGAAGAGTTGGAGAAGTATATCGCCATTA GAGAAGAGCTGTATAAGAAAGCTAAAGAGTTCGATTCTAAGATCATTGGTTTTGAAACAGCCATCAGGAGGCCCTACTTT CATGTACGGCCCCTCAATATTGGAGAGCTTGAGAACTGGCATAACTACCTGGACTTTATAGAAAGAGAAGGTGACTTAAG CAAGGTAACTGAGTTGGTTTCTTTTAAGTGTGCATACGCTTCCTAGTTTTTTTATCTTACTGATTGACTTACAGTAAGTA ATATCTGCTGTATCATATGTTTTATTGGCTAATCCCTTGGATGAAGCAACTTTTTAATCGAGAAATTGAACTGAGACTAA AGCATGGGCCTTCAAATTGGTTTCTTGAGGCTAAGTACTTCAAACCCTAATTTTTCAGTGGACATTCTAGGTTCATCATG TGTTTGTGAAAGTTCATTCCTTTTAAATTGCGAATGTTATGCATGCAGGTATCTTCTAATCTTCCTAAACATCTGTCTCA GGCAAGGAGGGTCCCTCATTTCATATTTGAGGGGCCTCTCTGTCCCGCTAAGGAGTATTTCTTAATGCTTTGTGTTTTCC TTATGTTCTATATTCTTGATTTTTGCTTGTGTATATATATCATAAGGGACATTTTTTACGATATTTTTTTGTTGTGTGAA TCAGATTGTCAAGTTGTATGAGAGATGTGTGATTGCATGTGCCAATTATCCTGAGTACTGGATACGCTATGTTTTATGTA TGGAAGCTAGTGCAAACATGGATCTTGCAAATAATGTGCTTGCTCGGGCAACCCAAGTATTTGTGAAGGTAATTTCATTT AAATACTAAAGCTGTAGGGCTGGAAATCATTTGCAACATTTTAACTTATCTTCTTCCCTCGAGTTTTTAAGCATTGAAGT GAAAGGGCTTCATATATAGTGGACTCTGGTACTATTTTCTGCTGTACCAAAAAAAAAGTGGACTCTGGTACCTAGCCACT TGTTGCTATGTTGCTTTTTACTCAAGCTAACTACTGGACTCCTACTGAGATAATAGTTAATGGAACTTGAATTTGTTTGA TGTTGTACCTTAATTATCTTGTTTGTTTGCCATAATGCAGAGACAACCAGAGATACATCTATTTTGTGCTCGGTTCAAGG AGCAGGCGGGAGATATAGCTGGTGCTAGAGCTGCGTATCAACTAGTGCATACTGAAACTTCTCCTGGTCTTCTTGAAGCA ATAATAAAACACGGCAATATGGAATATCGACTGGTATGCCGACTTATGCAAGTGTTAATAGATTGTGGCTTAATTTAAGT TAAATAGCTTAACACAGCATTTCTATTCCTTGATAATTATTACAGGGTGAGTTGGAGGATGCATTCTCGTTGTATGAACA GGCTATTGCCATTGAGAAAGGAAAAGAACATTCACAAACATTGCCAATGTTGTTTGCTCAGTATTCTCGATTTGTTTATT TGGTATGTTTGACTACAGATTTGTGTCCAAATGTCCTTCTGGTCCTTTGTTCTTAATTCATGCTTGTCATTGGTTGAATA TGTATTCTAATTTTTTGTTGGCTTTGTTTCATCAATTTATACGTATATTTTAATTTTAAGTTTTCTCATTGGTTTTATAA GATGATACTTACAGTTGCATTGATGAAAGTTGGCTACATTTTTTGTTAAGCTGTCTGCATTCTGTTAAATGATAATGATC TTGGGCGTAATGTGCTTCTCATTTATGTCAATAAATAAAGCATGCAAATGGCTATTGAAAAGAAATATGAATCATAACTT AAAATTTAGCATGACTATTCTTTTATGTTCGAACTGTTTTAGTTTTAGCCCTCCGGTTGTGTTACTATATTGTACTGTGT TGTGTGGTAATTGTCTTCCGTTTTTCTTGATATCCTTCTGTATCGTTTTGCCATCAGGCTTCTGAGAATGCAGAAAAAGC AAGAGAGATTCTAGTTGGGGGGCTTGAAAATGTTTCTTTGTCTAAGCCACTACTTGAGGTCAGTCCCTACCTCTTTAACT ATAAATGGGTTTTAACTTTCCTTACGTGATACTGTTGGAGATTCTTCTCTTTTTTAATTCCATGTTCTATACAGGCTTTA TTGCATTTTGAGGCTATTCAACCACAGCCTAAGCGAGTTGATATGGACTTTCTGGAGTCATTGGTTGTCAAATTCATAGT GCCCAATCCAGAGAGCCCTACTGTAGCAAGTGCTGCAGAGCGTGAGGAACTCTCCAGCATTTTTTTGGAGGTGATTCCTT ATAATAAGGATGTTTAAATGAGTTTCCTTGAGGAAGAAAATATTTTATTGCGTGTGACTGTGTTTTTTTTTTTTATAATT GTCCCATGGAAAGACCCTCTGAATGCTTATTACCAAAAAATTTGTTTTTGAGAATCCAGCTGGGTTGATTGTTCCATGGA ATTGGTTCTATTGAGTAGGTTAAGGCTAAGTTGATATGATAGAGTATTGTAAGGGACACTTCACTCACATCCCATTAAAC AAATAAACAACCTATTAAAACAATCTACCTATACCTAATCAATGGTTGTGGCAGGTGTGAATCATGATCTATAGTTAGAT AGTTATATGGTTAATGATGGGTAAATTTTGGCTAAATAAAGTGACCCAGATGACATGCATGGATGGTCAAATTGGTTTTA GTTAACTTTAACCTTGACTATCCATGTTAGATTGGATGGTCAAGGTTAGCTACTTTCATACTTGATATGCTTCCAGTTGA TATGTAACTTAGCTGTTTGAACTGATTCCATAGAAAAAAAATTCGTGTGTATCTTGTTATAATTAGTTACTCTGACCTAC TTTTAATAAGATTCTGAAATGATTTAACATTTTAGGCTGTGCTGATTCATTTATGTATTGGGTTATAATAAGCTAAAAGG GTGTGCAGACAATTTAGCAGTGACGAAATGTTTCAACTTCCCTAAGTTTTACCTTTGTTTCTACGAACACTCTTGCAAGT TGCAATGCTGATAGATTTTTAATAGCTTCATCAAATATGCATGTGATTGGTCGTATATGTCTTCGTATTGTTTGGTTTTA TTTTTAACAGCCTTAATTTAATACATTTTCTACATGGTACACCTATTTAATGGTTTTTATTCTGATTTCCAAAGACCTGT GATGTCTGAAGATTGTGTCTCTTACCCATGGACTTTCTGTTGACTTTCCAGTTTTTAAATCTCTTTGGAGATGTTCAATC TATCAAGAGGGGCGAGGATAGGCATGCCAAACTTTTCTTGCCACATAGGAGCATGTCGGAGTTGAAGAAACGTAGTGCAG AAGATTTCTTAGCTTCCAACAAAACTAAAGTCTCAAGAACTTATTCTGTTCAGTCACCTGCTCAATCTGTGATGGGTGCA TATCCCAATGCACCGAACCAATGGACTAACTATGGAGCACAACCTCAAACTTGGCCAGCAGTCCCACAAATACAAGGACA ACAATGGCCTGCTGGCTACAACCAGCAGGTAGATTATCGTTTTCTTTATTTGCTACAACCTGGAAGAAATTGTTTTACAT TTTAGCAAGTCTTTCAAACAATGCAATGTTAAACCACTTCTGTGTCACACTTACTAATTAGTAAGTAGTAATTGTTCAAT ACTAACCACTTCTGCAGTTGTAATTAAAAATGGACGTGGACACCCAAGATGCAACACATTTCTATTCCGTTGAATTGGAA TTTCTGCTTCATAAATTATGATGAAATGGGTTGACTGCTCCTTTGATTTAAATATACCTTGTACCCACATAAGACATCTT CCTGCATCTTTATTTACATGTCAAGAATGTGCTTCATTTATGCTATAAGCTTTACAGTACTGAAATGTCATATATTCATA TCGTTGTTCAGGAGTAAACAATTTTTGTACTTGTGTTATTTGTTTGTCATGGTTTATGTGTGTATTCTATTATATGTACT TACATATGCAATGCATTGATGAAGGTGTTACTTTTAATCCATTATTTAGTTGCTTTTTAACTGAAACTTTTGTGGTCATT TTTGTCATCATTTTATCCCCTTTATGTACTGGTCGATGAATTCATATGTTTCTAAGTGATTCATTCTGATTTGATGCAGG CTTCCTATGGGACTTATCCTGGATATGGGGGCAACTATGCAAACCCGCAGTTGCCTACGTCAGTCCCACAAAATACTGCT GCATACGGAGCTTATCCTCCTGCATATCCTGTACAGGTATAAAGCAGCTTCAGCTCTTCAGTTATAGTGATTATTTGGCC CGATATGTTCTGTGATCAGTGGTTTCTACAGTTGATTATTTCCCTACCGTAGAGAATCTCTTTAAGCATCATAGTTTAAC TGCACGAACACTTGTTATGCATTACTCCCTCCGTTCCACAAAGTTTGTTGTTTAAGGTTGTGGTACAAAGACTAAGATGA CAATTATTAATAGTATAATGTTACTATAGTACCATTATTTAATTTTACTAGTACTAAGTGCAACAATTAAATTTTACTTG AATAGAGAAGAATCTAGTTAATAGAGAAGAGTTGTAGTTGGTTGATATGAGAGGTGATAAGTGAGAAAATTTATTAAATG AGGGTATAGTTGGAAAAAATTAGCAAAAAATGCATTGGTTTTCTAAAACAACAAACATTTTGGGATATTAAAAGAAGGTC TAAAACAAACAAACTTTGTGGAACGGAGGGAGTATTTCGCAGTTGATATCTGACTTTTCTAACTCTGGCTGTTTCATTTC TAAACATTCTGCTGATGCTGAGCATTCCGATTTGTATCTAATGTTGATTCTTGTGCCTGAATTTCAGCCTGCAGTTCCTC AACAGACTTACGTACAACCTGTCGCAGCTCCTACACAGCAACCCGCTGCAGTTCCTCAGGCCTATTACGGGAGTTACTAT TGAGCAGACATGAGATGGCGCCACTGTTTTGCTCCCTGTAATTTCCCCCTCTATTATATGTAGTTTTGTGTTAGGAATTT TGGAGCATAGATGCAGTGTAAGTCACTCGAGTTTAGGAAATCATTCTGTCTGACTCAAAACTCGAGATTATTTGCAGCAT TAGACATTTTATTTGTGTTCTTCCTTTCACTGGTCAATGCTGATCTTTTCTGCGATACCTTAGTAACTGGACACCGTATT TTAATCTTAAAAAAGAAATTGTTTGGATCTTTTTTGAAATTAAGAATGTTTAAAATGTAGATAAAATTCAATAGAATATT GATATGGAAAAAACCACTGAAATATCCCATTGAATAAAACCTGATACAAAACTGAATCCAAAACAGGGTATTAAGGTAGA TAATAGGAATTATAAAATGGCTGAAATATATGTATCATGGAATGTTGAAGAATTAGTAGTAAAAACTAGACAATAGAAAA TGATTCTCGAAAGATACCCCTCTCCACTAACAACCCCTATATGTTCCCACGTGCCTTGCCCACAAGACATTTCATTTCTC AACAACTGATTCATCATCATCAACATCTTATTTATCTTCATCATTATCTTCAACATCTGATTCATCGTCATTATCATTAT CATCTTCAGCAACAACCCAAAATACCACACCCATCATAACCCATCTTATTCTTCAAACTCAATTTTCAAAACAAAATCAA CAAAAAAGCACCCACGATACACCCAATGTACCTAGCCTATATCACATTGCTTCAACCTGCTCAATCGCCCACGTATTGCA CAACCCTGATATGGAGAAACTGAAAACAGGGAAGCAAAAATTCAGGCATGTGAAAGGTTAGGAAGAGAACAGACCCAAGC TGCAAGCCAATTGAACACTCTTTGTATTCAATGCCATAAGAGAAGAGAAGGGATTGAATCGAAGGAAGAAGCATTGTTGG GAGTAGAGAAGGGACTAGGAGCGTGACTTGCAGGTTCTTTTGTGATGAAGCAAACAATGAGTAAGAGGAGTAATCGTGAA TCCTTGGAGAGGCAGCGGTTGTTTGCCAGCAAGAGAGTTAGCAACGTGGCCAAGGCGGCGGTGACGCGGTGGTGCACAAC GATAAAGGTGATCTAAAATAGAAATTGATTGAGGGCTTTTTTTCTCCTTGCGGCAAGGATCATCGTGGTCCAACTCGCTT TCTCATTGGTGGCTTGTGTTGGCCGGAACACGCCCCTGAAGGCGGCTATCGTGGTGGTTGAAGGCGCGACGAAACGACGA TCCGAACCATGAGTTTTGTTATAGACCTCACCAGGACCCCAATGGTGCTGGACTCGCTGCGAACAGAGGCGGGAGCATGT CAGAATCGAGGAGAGAAGGTGGCAGCGGTGACACTTCATTCTTCTTTGTTTTCATGGTGGCTGCCCTTTGGAGAGGAAGA AAGAAGCATGGTGATGGTGGTGGTACTTCATAGAAGAAGAAATCGTGGCTGGCCCACGGTGGTGGTGGTTCTCATGCTAA GCAAAAGGTGAAAGGAGAAGATGCGAGAATGAAGAATTGCTTTCACCCTGCATATGCATTTGGTGAGCATGATACACAAT AT
CDS sequence (LotjaGi1g1v0704400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCATGGAGCCGCACCATCACCATCTTCTCCACTGATATAAACCAAGCACCCTTCATTCGGTTCCCTACTTCGAAATT CCACTTCTCAAATTTCCCCCAAAAACCGAAGAAGCAGGGTTTCAATCTTCTTCACTGCAACGAAGCGGTTAATCTCCATT TCAGTATGGGAGATAGTGAGACAGTAGTTGCTGATGCATCTGCGGCGGAGGCGTATGCTGCTTCTGCTTCTGCTGGACAT GCTGACACCGTCATGGATCCTGTTCCTGAGGCTGGTGCTGCTACTGGAGAAGCTTCTCAGGCTAATTCTGCTTATGGATA TGGTGAGGGGAATGTGTATGCTAGGGATCCTAATTCCGGCCAGTTGGGTGGAACCGGTGATTCCAAGCAAGCTGCTGGAG TTGTCGATGCTAATGAGGCTGGAAATGCGGCTGCGGAGAATAGTGTAGTTCCTGAATACAACTCAACTGCAAATGGCAGT GTAGTGACAAATGCTGCGGGACTTGAAAACGGGAACGCGGTGGACAATGTTGATGGGTCAGCTGATGAGAAACAGCTTGC AGATGGTTATGCTGCCTTGTCTGCTGAAGAAGATCGACTGTGGAATATTGTTAGTGCTAATTCTTTAGATTTTACTGCTT GGACTGCCTTGATTGAAGAGACTGAGAAGGTGGCAGAGGACAACATCTTGAAGATTAGAAGAGTCTATGATGCTTTTTTA GGAGAATTTCCTTTGTGTTATGGTTATTGGAAGAAATATGCTGACCATGAGGCACGTCTTGGCGCTGTTGATAAAGTTGT TGAAGTGTATGAGCGTGCTGTTCAAGGAGTTACATACTCAGTGGATATGTGGTTGCATTATTGCATATTTGCTATAAGCA CATATGGGGATCCAGACACAGTTCGTAGGCTTTTTGAACGAGGATTAGCTTATGTTGGAACAGATTATCTTTCTTTTCCT CTTTGGGATAAATACATAGAATATGAATATATGCAGCAAGACTGGGCCCGCCTTGCCATGATCTACACCAGAATATTGGA GAATCCAAATCAGCAGCTGGATCGGTATTTTAACAGCTTCAAGGAGTTAGCTGGCAGTCGACCATTGTCAGAATTACGGA CTGCTGATGAAGCTGCTGCAGTGACAGGTGTTGCTTCAGAGGCTACTGACCAACCTCTTGAGGGAGAGGACCGTCCTGAT GGTGCAGAGATTTCTCCTAAACCTGTAAGTGCTGGCTTAACAGAGGCAGAAGAGTTGGAGAAGTATATCGCCATTAGAGA AGAGCTGTATAAGAAAGCTAAAGAGTTCGATTCTAAGATCATTGGTTTTGAAACAGCCATCAGGAGGCCCTACTTTCATG TACGGCCCCTCAATATTGGAGAGCTTGAGAACTGGCATAACTACCTGGACTTTATAGAAAGAGAAGGTGACTTAAGCAAG ATTGTCAAGTTGTATGAGAGATGTGTGATTGCATGTGCCAATTATCCTGAGTACTGGATACGCTATGTTTTATGTATGGA AGCTAGTGCAAACATGGATCTTGCAAATAATGTGCTTGCTCGGGCAACCCAAGTATTTGTGAAGAGACAACCAGAGATAC ATCTATTTTGTGCTCGGTTCAAGGAGCAGGCGGGAGATATAGCTGGTGCTAGAGCTGCGTATCAACTAGTGCATACTGAA ACTTCTCCTGGTCTTCTTGAAGCAATAATAAAACACGGCAATATGGAATATCGACTGGGTGAGTTGGAGGATGCATTCTC GTTGTATGAACAGGCTATTGCCATTGAGAAAGGAAAAGAACATTCACAAACATTGCCAATGTTGTTTGCTCAGTATTCTC GATTTGTTTATTTGGCTTCTGAGAATGCAGAAAAAGCAAGAGAGATTCTAGTTGGGGGGCTTGAAAATGTTTCTTTGTCT AAGCCACTACTTGAGGCTTTATTGCATTTTGAGGCTATTCAACCACAGCCTAAGCGAGTTGATATGGACTTTCTGGAGTC ATTGGTTGTCAAATTCATAGTGCCCAATCCAGAGAGCCCTACTGTAGCAAGTGCTGCAGAGCGTGAGGAACTCTCCAGCA TTTTTTTGGAGTTTTTAAATCTCTTTGGAGATGTTCAATCTATCAAGAGGGGCGAGGATAGGCATGCCAAACTTTTCTTG CCACATAGGAGCATGTCGGAGTTGAAGAAACGTAGTGCAGAAGATTTCTTAGCTTCCAACAAAACTAAAGTCTCAAGAAC TTATTCTGTTCAGTCACCTGCTCAATCTGTGATGGGTGCATATCCCAATGCACCGAACCAATGGACTAACTATGGAGCAC AACCTCAAACTTGGCCAGCAGTCCCACAAATACAAGGACAACAATGGCCTGCTGGCTACAACCAGCAGGCTTCCTATGGG ACTTATCCTGGATATGGGGGCAACTATGCAAACCCGCAGTTGCCTACGTCAGTCCCACAAAATACTGCTGCATACGGAGC TTATCCTCCTGCATATCCTGTACAGCCTGCAGTTCCTCAACAGACTTACGTACAACCTGTCGCAGCTCCTACACAGCAAC CCGCTGCAGTTCCTCAGGCCTATTACGGGAGTTACTATTGA
Protein sequence (LotjaGi1g1v0704400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPWSRTITIFSTDINQAPFIRFPTSKFHFSNFPQKPKKQGFNLLHCNEAVNLHFSMGDSETVVADASAAEAYAASASAGH ADTVMDPVPEAGAATGEASQANSAYGYGEGNVYARDPNSGQLGGTGDSKQAAGVVDANEAGNAAAENSVVPEYNSTANGS VVTNAAGLENGNAVDNVDGSADEKQLADGYAALSAEEDRLWNIVSANSLDFTAWTALIEETEKVAEDNILKIRRVYDAFL GEFPLCYGYWKKYADHEARLGAVDKVVEVYERAVQGVTYSVDMWLHYCIFAISTYGDPDTVRRLFERGLAYVGTDYLSFP LWDKYIEYEYMQQDWARLAMIYTRILENPNQQLDRYFNSFKELAGSRPLSELRTADEAAAVTGVASEATDQPLEGEDRPD GAEISPKPVSAGLTEAEELEKYIAIREELYKKAKEFDSKIIGFETAIRRPYFHVRPLNIGELENWHNYLDFIEREGDLSK IVKLYERCVIACANYPEYWIRYVLCMEASANMDLANNVLARATQVFVKRQPEIHLFCARFKEQAGDIAGARAAYQLVHTE TSPGLLEAIIKHGNMEYRLGELEDAFSLYEQAIAIEKGKEHSQTLPMLFAQYSRFVYLASENAEKAREILVGGLENVSLS KPLLEALLHFEAIQPQPKRVDMDFLESLVVKFIVPNPESPTVASAAEREELSSIFLEFLNLFGDVQSIKRGEDRHAKLFL PHRSMSELKKRSAEDFLASNKTKVSRTYSVQSPAQSVMGAYPNAPNQWTNYGAQPQTWPAVPQIQGQQWPAGYNQQASYG TYPGYGGNYANPQLPTSVPQNTAAYGAYPPAYPVQPAVPQQTYVQPVAAPTQQPAAVPQAYYGSYY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 109 | 129 | 21 | - | – | |
| PANTHER | 175 | 840 | 666 | 1.0E-260 | – | |
| PANTHER | 175 | 840 | 666 | 1.0E-260 | – | |
| Gene3D | 202 | 368 | 167 | 4.7E-42 | ||
| SUPERFAMILY | 204 | 372 | 169 | 1.33E-32 | ||
| SMART | 227 | 259 | 33 | 0.002 | ||
| SMART | 261 | 293 | 33 | 0.031 | ||
| SMART | 296 | 331 | 36 | 2.2E-6 | ||
| MobiDBLite | 383 | 409 | 27 | - | – | |
| SUPERFAMILY | 421 | 724 | 304 | 9.36E-36 | ||
| Gene3D | 456 | 756 | 301 | 3.8E-44 | ||
| SMART | 476 | 508 | 33 | 0.0013 | ||
| ProSiteProfiles | 566 | 599 | 34 | 9.496 | ||
| ProSiteProfiles | 566 | 599 | 34 | 8.349 | ||
| SMART | 580 | 615 | 36 | 1100.0 | ||
| SMART | 621 | 653 | 33 | 800.0 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | RNA processing | Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules. |
Expression pattern of LotjaGi1g1v0704400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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