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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0718700 |
| Transcript ID | LotjaGi1g1v0718700.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ARM repeat protein interacting WITH ABF2 protein; TAIR: AT5G19330.1 ARM repeat protein interacting with ABF2; Swiss-Prot: sp|B9DHT4|ARIA_ARATH ARM REPEAT PROTEIN INTERACTING WITH ABF2; TrEMBL-Plants: tr|M1AZA4|M1AZA4_SOLTU Uncharacterized protein; Found in the gene: LotjaGi1g1v0718700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:128756380..128761140) extracted from Lotus japonicus Gifu genome v1.2.
TAAAAAAACACTAGTTTATTATCGAAAGAACTCATTTTGGGTACCAAACCTTAATCTTGCCCGAGCAATCTAACACCTAG ATCCGTCCCTGATCCCAGTTGCAAAGTTTGTATTAAACCATTCACGATCTTCCTATCTCTCTCGTTCGTACTTTCCATCT ACAGATTGCAATACACAGATGGATTCTCCACTTGACAAGATTCCCCAACATGTTCTTGTCCTGAATTCCGCCCCCTCACC CTCTCTCTCAGATCGTGCTGCGGCAACAACGGCCCTTTATGTTTTAAATGGTGCCATTGCCAGAGAAGATCAAGATTCTC CACGAGTTCTACTTGACAAGATTCTCCAACATCTTCGTATCATCAATTCCGACCAATATTGTAATACAGAGACACAGACG AAGGATTCTCCACGACCACGAGATCTACTTGACAAGATTCTCCAACATGTTCTTATCCTCGACTCCGCCCCCCCACCCTC TCTCTCAAGCCGTGCTGCTGCTACTACTACGTTCGATGTTCGAAATGGCCCTCGCAGAGACGGTACACTTTCCACTCTTG TCCCCAGTTTCTATTTTGTTTGCGTAATGTTTTCATTTTATTGTCATGTAGCGGAGCTTGCGGATATACTGAATTGTCAT GCTGTCCCTGTTATTATGAGACTTCTTTTTTATTTGAGAGATGAAAATAGTGGTCAAGGCTTTTCCGATACCTTCAAATA TGATGTGCAGAGAGGATGTGCTTTGGTCCTCACCCTTCTATCTTTTCAAGTAATTGATTTCTTATGTTTTTGAACTGTGC AACATCAAGTTGTATTAATTCCTGACTTTATATATTTGAGCTTATATATCTTTATCTTCAAACAGCCAAAGTATCAACGA CTCATTGTTGATGCTGGAGCCTTGCCTCATCTTGTTGATTTGTTAAGGGTGCACAAGGCTGGTGTCATGTCTCAAGCACT TCTTGGTATTCTTAAGACAACAGCAGGCGCAATAACCTATCTTGCCTATGAAAACTCCAACATTAAGACCCTTGTTAGGT TGTCCTTCCTTTCATACGTTAGAGATATATGCTGCAAATCTTCTACCCTCTAGTCTTACACGGATATGGCGTGTTCAGGA ATGAAGGTGGTATTCCTCCTCTTGTTGAATTGCTTGAATTCAATGATTCAAAGGTACAGGTTGCAGCTGCAGGGGCCTTG CGAATTCTTGCATTCAGAAATTATGACAACGCAAATCAGGTAGTTTACTTTGCACTGTGAATTGGTATGGTGGGTTCTAT TGTCATAGTTGTTTAAGTGAATGAAATTTTTTGCAGATTGTTGACTGCAATGCATTGCCCACTCTTGTACTAATGCTTGC ACCAGATGACCCTACTATACATTATGAGGCGGTTAGTCACTAATGAATTTCGATAATCCTTTGTATTTAATTTTGTTAGT TTCAGAGTTATAAGCTTTTAGCACTAGCTGAATTAGCGGTTTTTGCAGGTTGGTTTAATTAGAAATCTGGTCCACTCTTT GCCGAATATTAAGGAAGCTCTTCTTGAAGCTGGTGCTTTACAACCAGTGATTTGGTTGTTGAGGTAACATTGCACATAGG TCTTCCTTTTATTGTATCCAATACACATGAGAATGATGTGTTTGTCAAACATGTTAGCTACTTTGCTGCGAGTGAGCAAT ACCTTTTCTCCCTAATTAATCTATGCAAGTTCATAATTTTCATGATAGTTCCTCATGTTTGAAGAGCCAAAGAGAAGCAA CTCTTTTACTTGGTCAGTTTGTTGAATTGGGTCGGGCTACTAAGGTGGATCAAGTTTTGTGCTTTTTGCTAAATACCACA ATTCTATCATTCATGGAATAATTCTCGTGTTAATTTTCATACCTTGTGGTTCATGCAGGTTCAGATTGCCGAAAGAGGGG CTGTAAGACCTTTGGTTGACATGCTTACGTCCTCAGATGAACAACTTAGTGGAATGTCAGCTTTTGCTCTTGGGAGGTTA GCACAGGTGATTATTACTAGCAGCAAATACTTGGTTGTCTGTTACGAAATTGATGAATATAAAGTGAAGTTGGGTAATTT TTTGGATGTATGTTGGAATTGATTTTTTAGACCTATTTCTTATATAATATAATTCAACTGTTAGGACCCTGACAATCAAG CTGACATTACTTATAATGGAGGTATAGAGCCTCTACTCAATCTTCTTGGCTCAAAGAGTTATTTTGTCCAACACAATGCA GCCTTCACTCTCTATGGTCTAGCTGTTAATGAGGTGGGAGTTAGTTTCCTTGTTCGTTACTTGGTCAAAACCTTGATTGT ATGCTGCCACTGATATCATTGCTTGTTTTATAGGACAATGTCGCAGATATTATTAAGGCTGGTGGTCTTCAAAAACTTCT TGATGGACATTTTAATACTATTGTATGTTAATTAAGTGCATGTTTGAATAGACAGTGGAAAACCATGTTGAAGCAAACTT CATTGTCTACCTTGATTTTGTTCTCACTGTGGTTTTCCACCTTGTATCCAAACATGCACTTAGTCTCTTTTTTAGTGAAG TAATTTACATTCGGTTTACTTGTATTTCTTGATTATTTTATTTATTTATCAAGGTTCGCTAATAGAACTCCTTTCTCTCA CTAATTTATTAATTGGGATATTACAGCCTACTAAAAAGTGTGTAGCAATAACATTAAAAAAATTAGAGGACAAGATGCAT GGGCAAGTGAGTTTTCTAGCACATTATCAAATTTCTATGGCCACTGATTGATTATAGTCAATTTTGAGATTTGTAATCTA TTTTAATACTTTTTTTCTTGCATAATATGATGTGATTATTGTGTCATTTCCTCTTTTGTAGGTACTAAAACACCTGATGA ATCTTATGCGCTTTGCAGACAAAGGTGTTCAAAGACTTGTAGCTATTGCTCTTGCTCATTTATGTTCTCCCAATGATCGT AAAACTATATTCATTGTTAATAATGGTAAAGATCTTAAATCTGTCCATTTTTGTCATTTCTCACTCACAATACTCGGAAA ATATTTTCATTCAATAAGCTCCTAAATCTTTAGGACTAGAATTGCTTCTGGATCTTCTTGAATCTGCCAACCTAAAGCAT AAGAGTGATGCTTCAACAGCGCTTTACAAGTTGGCTACCAAAGCCACCCGTGTCTATTGTGTTTTCCATGCTCCTCCATC ATTCAAGGTATTTTACCATCATGCGTTCAAGCACTTATTCTAGGTTATCATAATTGCATCACTCATAGTTGAAATTGAGT TGTTGTTCATGTTATATGGATGACAATGAACTAAACAGGATATTTGTTATTCACATTTTCTGTTATTTATTGTTGGTTGT ATTTTCTGTAGTTGTACTCAGGCGAACAATATGTGAACAATCCTAATGTCTCTGATGTCACATTCTTAGTTGAAGGTGGA TAAGTTGTTGCCAAATTGCTATTGCTTTCTATTACTTTGTTTATATGCTTAATAATTTTGACATATGTACTAATTTACTT TGTTTTCCTTTCTTCAGGTAAAAGGTTTTATGCTCATAGAGGTTCTTTAAAGGCTTCTTCTGATGTATTTCGTGCAATGT TTGATCAGTGTTATATGGTAATTTTTAATTAATCTTGGGACTTTGTTTTAAGCTTTGTTTTCTCTTCCATTCTGACCTGC CTGTGATGACTAGTCACTTTGCAATTGAAATAGGGCTAATGGATCTGCGAAACTAAAGCATAAATATCTGCAATAATGGC TTAATATATGTATAATGCAGGAAAGTGATGCCCAAGATATAGAGATTCCAAATATTAAATGGGATGTCTTTGAGTTGATG ATGAGGTATCGTGGTGCAAAGTGCAATACCTATTGTTCTTATTTCTAATATACTTTTTTATAATAAGCCTATGTATTAAC TGGTTTTCAATTGGACTCTAGATTTATTTACACTGGAACAATAGATGTCAATTTGGATATTGCTGAGGACCTCCTCAGTC TTGCAGATCAATATCTTCTGGACAATCTTAAGTCTCTTTGTGAACATGCTATTTCTCAGGTGGACCAATATTTCTTATAC GCTTGTAGAATTTTTTTTATTGTTTGATTTAATCCAATGACTTTGAAATTATTCTTATAGGATATTTCAGTTGACAATGT TTCACTAATGTACGAGATGTCAGAGGCTTTCAATGCTACATCATTAAGAAATGTGTGCATATTGTTTTTTCTGGAGCAAT TTGATAAGTTGAGTGTCAAACCATGGTATGTACAATCTTTACAACTTGAACAACACTTTAATAGTTGTTGTATTGTGAGG TTATAACTCATTGTTAGCATGAGCGGGGACATATATATTTTTTACATACACAACATTGAACATAGAGTAAACCATTCTAG TGAAGGACATCATACTAAAGTTTTGGGTGAAAGATGTGTCATCACTAATGGGATTTACTCCTTGTCCCATATGGTGTATT AAAAATATTTTCATGCCTCTTCTCATGCTAAAACAGTGAAAGATAACCTCACAACAAAACAACACTGACATCAGAGCGGA TTGAGCCGCTTAACCTTTTTCTTATCAATACTAACTACAATAGTGAAGACTTCTTCTGTTCTTCAGTGCAACAATAATAA ATGAATGATCTTGAGTGAGCTTCTTTATTCTTCTAAAAGAAGCAATTATTGATATAGGAACACATCCTTCTTTGTTCTTC TTTACAAAAAACTCAATAGGTACTTATAAGTGAGCAGATTT
CDS sequence (LotjaGi1g1v0718700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATTCTCCACTTGACAAGATTCCCCAACATGTTCTTGTCCTGAATTCCGCCCCCTCACCCTCTCTCTCAGATCGTGC TGCGGCAACAACGGCCCTTTATGTTTTAAATGGTGCCATTGCCAGAGAAGATCAAGATTCTCCACGAGTTCTACTTGACA AGATTCTCCAACATCTTCGTATCATCAATTCCGACCAATATTGTAATACAGAGACACAGACGAAGGATTCTCCACGACCA CGAGATCTACTTGACAAGATTCTCCAACATGTTCTTATCCTCGACTCCGCCCCCCCACCCTCTCTCTCAAGCCGTGCTGC TGCTACTACTACGTTCGATGTTCGAAATGGCCCTCGCAGAGACGCGGAGCTTGCGGATATACTGAATTGTCATGCTGTCC CTGTTATTATGAGACTTCTTTTTTATTTGAGAGATGAAAATAGTGGTCAAGGCTTTTCCGATACCTTCAAATATGATGTG CAGAGAGGATGTGCTTTGGTCCTCACCCTTCTATCTTTTCAACCAAAGTATCAACGACTCATTGTTGATGCTGGAGCCTT GCCTCATCTTGTTGATTTGTTAAGGGTGCACAAGGCTGGTGTCATGTCTCAAGCACTTCTTGGTATTCTTAAGACAACAG CAGGCGCAATAACCTATCTTGCCTATGAAAACTCCAACATTAAGACCCTTGTTAGGAATGAAGGTGGTATTCCTCCTCTT GTTGAATTGCTTGAATTCAATGATTCAAAGGTACAGGTTGCAGCTGCAGGGGCCTTGCGAATTCTTGCATTCAGAAATTA TGACAACGCAAATCAGATTGTTGACTGCAATGCATTGCCCACTCTTGTACTAATGCTTGCACCAGATGACCCTACTATAC ATTATGAGGCGGTTGGTTTAATTAGAAATCTGGTCCACTCTTTGCCGAATATTAAGGAAGCTCTTCTTGAAGCTGGTGCT TTACAACCAGTGATTTGGTTGTTGAGTTCCTCATGTTTGAAGAGCCAAAGAGAAGCAACTCTTTTACTTGGTCAGTTTGT TGAATTGGGTCGGGCTACTAAGATTGCCGAAAGAGGGGCTGTAAGACCTTTGGTTGACATGCTTACGTCCTCAGATGAAC AACTTAGTGGAATGTCAGCTTTTGCTCTTGGGAGGTTAGCACAGGACCCTGACAATCAAGCTGACATTACTTATAATGGA GGTATAGAGCCTCTACTCAATCTTCTTGGCTCAAAGAGTTATTTTGTCCAACACAATGCAGCCTTCACTCTCTATGGTCT AGCTGTTAATGAGGACAATGTCGCAGATATTATTAAGGCTGGTGGTCTTCAAAAACTTCTTGATGGACATTTTAATACTA TTCCTACTAAAAAGTGTGTAGCAATAACATTAAAAAAATTAGAGGACAAGATGCATGGGCAAGTACTAAAACACCTGATG AATCTTATGCGCTTTGCAGACAAAGGTGTTCAAAGACTTGTAGCTATTGCTCTTGCTCATTTATGTTCTCCCAATGATCG TAAAACTATATTCATTGTTAATAATGGACTAGAATTGCTTCTGGATCTTCTTGAATCTGCCAACCTAAAGCATAAGAGTG ATGCTTCAACAGCGCTTTACAAGTTGGCTACCAAAGCCACCCGTGTCTATTGTGTTTTCCATGCTCCTCCATCATTCAAG TTGTACTCAGGCGAACAATATGTGAACAATCCTAATGTCTCTGATGTCACATTCTTAGTTGAAGGTAAAAGGTTTTATGC TCATAGAGGTTCTTTAAAGGCTTCTTCTGATGTATTTCGTGCAATGTTTGATCAGTGTTATATGGAAAGTGATGCCCAAG ATATAGAGATTCCAAATATTAAATGGGATGTCTTTGAGTTGATGATGAGATTTATTTACACTGGAACAATAGATGTCAAT TTGGATATTGCTGAGGACCTCCTCAGTCTTGCAGATCAATATCTTCTGGACAATCTTAAGTCTCTTTGTGAACATGCTAT TTCTCAGGATATTTCAGTTGACAATGTTTCACTAATGTACGAGATGTCAGAGGCTTTCAATGCTACATCATTAAGAAATG TGTGCATATTGTTTTTTCTGGAGCAATTTGATAAGTTGAGTGTCAAACCATGGTATGTACAATCTTTACAACTTGAACAA CACTTTAATAGTTGTTGTATTGTGAGGTTATAA
Protein sequence (LotjaGi1g1v0718700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDSPLDKIPQHVLVLNSAPSPSLSDRAAATTALYVLNGAIAREDQDSPRVLLDKILQHLRIINSDQYCNTETQTKDSPRP RDLLDKILQHVLILDSAPPPSLSSRAAATTTFDVRNGPRRDAELADILNCHAVPVIMRLLFYLRDENSGQGFSDTFKYDV QRGCALVLTLLSFQPKYQRLIVDAGALPHLVDLLRVHKAGVMSQALLGILKTTAGAITYLAYENSNIKTLVRNEGGIPPL VELLEFNDSKVQVAAAGALRILAFRNYDNANQIVDCNALPTLVLMLAPDDPTIHYEAVGLIRNLVHSLPNIKEALLEAGA LQPVIWLLSSSCLKSQREATLLLGQFVELGRATKIAERGAVRPLVDMLTSSDEQLSGMSAFALGRLAQDPDNQADITYNG GIEPLLNLLGSKSYFVQHNAAFTLYGLAVNEDNVADIIKAGGLQKLLDGHFNTIPTKKCVAITLKKLEDKMHGQVLKHLM NLMRFADKGVQRLVAIALAHLCSPNDRKTIFIVNNGLELLLDLLESANLKHKSDASTALYKLATKATRVYCVFHAPPSFK LYSGEQYVNNPNVSDVTFLVEGKRFYAHRGSLKASSDVFRAMFDQCYMESDAQDIEIPNIKWDVFELMMRFIYTGTIDVN LDIAEDLLSLADQYLLDNLKSLCEHAISQDISVDNVSLMYEMSEAFNATSLRNVCILFFLEQFDKLSVKPWYVQSLQLEQ HFNSCCIVRL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 74 | 716 | 643 | 6.1E-281 | – | |
| PANTHER | 74 | 716 | 643 | 6.1E-281 | – | |
| Gene3D | 100 | 210 | 111 | 1.6E-6 | ||
| SMART | 121 | 173 | 53 | 22.0 | ||
| SUPERFAMILY | 127 | 209 | 83 | 3.07E-5 | ||
| SMART | 174 | 222 | 49 | 0.028 | ||
| ProSiteProfiles | 185 | 235 | 51 | 10.517 | ||
| Gene3D | 211 | 351 | 141 | 8.5E-32 | ||
| SUPERFAMILY | 211 | 543 | 333 | 3.15E-50 | ||
| SMART | 224 | 264 | 41 | 4.8E-8 | ||
| Pfam | 227 | 263 | 37 | 2.1E-7 | ||
| ProSiteProfiles | 235 | 266 | 32 | 11.392 | ||
| SMART | 266 | 306 | 41 | 2.1E-6 | ||
| Pfam | 268 | 305 | 38 | 8.2E-5 | ||
| ProSiteProfiles | 277 | 319 | 43 | 9.572 | ||
| SMART | 308 | 348 | 41 | 9.6 | ||
| SMART | 351 | 388 | 38 | 110.0 | ||
| Gene3D | 352 | 553 | 202 | 5.7E-29 | ||
| ProSiteProfiles | 359 | 401 | 43 | 10.062 | ||
| SMART | 389 | 429 | 41 | 6.0 | ||
| ProSiteProfiles | 400 | 442 | 43 | 11.322 | ||
| SMART | 504 | 544 | 41 | 8.8 | ||
| SUPERFAMILY | 553 | 668 | 116 | 4.71E-29 | ||
| CDD | 561 | 676 | 116 | 4.218E-60 | – | |
| Gene3D | 565 | 708 | 144 | 8.4E-41 | – | |
| Pfam | 567 | 669 | 103 | 3.5E-25 | ||
| ProSiteProfiles | 574 | 641 | 68 | 18.617 | ||
| SMART | 574 | 671 | 98 | 2.0E-25 | ||
| CDD | 670 | 717 | 48 | 7.44255E-17 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0718700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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