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Field | Value |
---|---|
Gene ID | LotjaGi1g1v0756100 |
Transcript ID | LotjaGi1g1v0756100.2 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Protein kinase; TAIR: AT5G26751.1 shaggy-related kinase 11; Swiss-Prot: sp|P51139|MSK3_MEDSA Glycogen synthase kinase-3 homolog MsK-3; TrEMBL-Plants: tr|G7KTQ8|G7KTQ8_MEDTR Glycogen synthase kinase; Found in the gene: LotjaGi1g1v0756100 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:132954235..132957479) extracted from Lotus japonicus Gifu genome v1.2.
TTGATGGCATCAGGGGTTGTGCCACCTGCTTCTGGATTCACAGATATGAACACAAGTTCAGTTGTTGGGGTTGAAAGGTT GCCCCATGAATTGAATGTCATGAAAATCAGGGATGACAAGGTCAACAACTTTTACCCCACTTTGCTTTTTCTTTCTTTGT TTCTTTTCATTCTATTGAATGTATATGAAGTCTATTTATTTATGTTAATACTTGCTGAACATAATGCAGGAAATGGAAGC CACTGTGGTAGATGGAACTGGAACAGAAACTGGACATATAATTGTCACTACCATTGGTGGTAAAAATGGCCAGCCTAAAC AGGTTTGTGTCTCATTTCTGGTTTCTGGTTTCTGGTTTCTTGTTAGTTGCTACTGATAGTTGGACACCTATATAGTCTAT GAACTTTATATATGTTTGATGTTTCAATTTTAGACAATAAGCTACATGGCTGAGCGTGTTGTTGGAAATGGGTCCTTTGG GGTAGTTTTCCAGGTTAGTCCTTTTGTAATGCTCCTTTTAGCCAACTTTAAATGCATGTTTGGAAACTCTCTTGCCATTG ATTATGAAATGGAAGGTTTCAGAATTGATTTTGATGTAAGAGAATCGGATCTGAACATGCTATAAATTGGTTTTTGGTTA GTTTTGAAGTTTTGCTGTATGCTCATGGTTATTTGTTGTTATTTTTCAATTGTGCAGGCAAAGTGCTTGGAGACTGGTGA AACTGTGGCAATTAAGAAGGTTCTTCAAGATAAGAGATACAAGAACCGTGAATTGCAAACCATGCGCCTTCTGGACCACC CTAATGTTGTATCTTTGAAGCATTGTTTCTTTTCTACAACTGAAAAGGATGAACTATATCTCAATCTTGTGCTTGAATAC GTTCCTGAGACTGTCAATCGGGTCATCAGACACTACAACAAAATGAATCAAAGAATGCCATTGATATATGTCAAACTTTA TTCTTACCAGGTATATCTATGCACTGTATTTCTTCCTTAAAGTTTTCTTCTTCTTGTAAGCTTTAAATAGATGTATCTCT TTGTTGGTTCTCATTATCCCTTCTCGTTCTTAATTGCAGATTTTGAGAGCACTTGCTTATATTCACAACAGCATTGGAGT GTGTCACAGGGATATAAAACCTCAAAATTTACTGGTATATATTCACACAGTACCTTTTATCATTTGGTTATCGTATTTGT GTGTCACCAGCTGAATTGAACTTGAATATCGATATAATGTCTGTGCTGTTTTATTTGGATACAATTTGTGCTGTTAAGTC TGTTTTTTATTTTTTGAAAATTTATGAACCTGCAAAACCTTCAGAAGATGTTTCAAATGAATATTTGAAAGTTTAAGTTT GAGCATTTATAAATTGTTGCCTTACATTCCCTTTACGATGGAGAAAGAGTGATTTTTGGTTCTATCTTCTGGATGTTGTC ATAACAGGTCAATCCTCACACCCACCAGTTGAAGATATGTGACTTTGGAAGTGCTAAAGTCTTGGTTCGTTTATTCTTAA CCTGAAAATCCCATTGTCCGTTTTCAATGACTGTCTAATGTTTTATATGACCATATGCTGCTCATGTTTTACAGGTTAAA GGTGAGCCGAACATATCTTACATCTGCTCTAGGTACTATAGAGCTCCTGAGCTTATATTTGGTGCAACGGAGTACACCAC AGCCATTGACATCTGGTCAGCTGGTTGTGTACTTGGTGAACTGTTGCTTGGCCAGGTAGATATCTAGCTTTCTCAAGTAT GTATTCTAGTACATCTAAAATTCACAGATGTATAGAAACTAATAATCAATTTTTGTTTCTGCCAGCCGCTTTTTCCTGGT GAGAGTGGAGTAGACCAGCTTGTGGAAATTATCAAGGTATGATATGTTTTAGATTAATACAAGTTTAGACTGTAAGATTC AGGCATTCTGATAAGTGCTGGTTTTCTCTGGATGGTCCCTCTTAGAATTATAGGGCCTAACCCGAATTATAAGATGTATC AGAACATATTCTAGATCCGTTTGTTGGACCATGCAAAAATAGGCCACCCACAAATGTCCAATCCTGTAAGATTCATGCTC TAGATGTCCATCCTTGAACGTGAGTGGTGTATTAGGGATCCACACATCGACTACAGATATGACCAAATTAGACATGACAT AGGGTTGAGTAATTCTCATCTGTCACCCCTGAGCTAACTTTTTGGGACAGAGCTAAGCCTAACTGGAACTTTTAGAGTCT GAACTTTGAAGTTTGAACAAGCACCCTGTGCAGGCATAAGTGACTATGTGACCTTGTAACTAGCTTAAGTATATCATTAC AAAGTGTCCTTGTTTCTTCTTTCTGTCTTGTTGAATGGTACATTTAGTTACATTACCTCTGAAGATTATTGGGATTGGCT TGCAGGTTTTAGGTACCCCAACAAGGGAAGAAATCAAGTGTATGAATCCTAATTACACAGAGTTTAAGTTTCCTCAAATT AAAGCTCATCCATGGCATAAGGTATAGTAATATTTCTTTTTTGTCTTTTTAGTTCCTAACTTCTTATACCATATTATATT TATCTGTTTATGGTTCTTTATCAGATCTTTCACAAGCGAATGCCACCTGAGGCTGTGGATCTTGTCTCAAGACTTTTGCA ATACTCTCCAAATCTTCGAAGCACAGCTGTGAGTACATAATTTCATACAATATAGATTTTACCTTTTAGACAGTTTTGTG CCTGAGCATTATATGGCTGCATTTGCATTACACTATTACTACATAATGCATGTAGTTCCTTATAATTATGTTGTGTTTGA TTTTCAAAATTCTACCATGTAGCTTTGGCATATGACATGCCATATATGTCACTAATGCAAATGTAGTTGGCCGAAACTTT CTACTTCACAGCCGAATATGTGGTTAAATATCCATAATTGTTTCCAATTGAACGTTATCTTAAACTACGTTGTTTGTGCC ATGTAGTTGGAGGCTCTGGTTCATCCATTCTACGATGAGCTGCGTGAGGCAAATACCCGGTTGCCAAATGGCCGTTTCCT TCCTCCACTATTTAACTTCAAAGCCAATGGTAAAGAACCAATTTCCAGATAACGATTGTGTTATTACTTGTTGTAATCTC TCAAAGTTCTCAGTTAATGATGTTTCTGAAAATCTGATGCAGAGCTTAAAGGAGTAGCAGCTGAGATGCTTGTGAAGCTG ATTCCACCTCATGCAAGAAAGCAGTGTGCCTTGTTTGGGTCATAA
CDS sequence (LotjaGi1g1v0756100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCATCAGGGGTTGTGCCACCTGCTTCTGGATTCACAGATATGAACACAAGTTCAGTTGTTGGGGTTGAAAGGTTGCC CCATGAATTGAATGTCATGAAAATCAGGGATGACAAGGAAATGGAAGCCACTGTGGTAGATGGAACTGGAACAGAAACTG GACATATAATTGTCACTACCATTGGTGGTAAAAATGGCCAGCCTAAACAGACAATAAGCTACATGGCTGAGCGTGTTGTT GGAAATGGGTCCTTTGGGGTAGTTTTCCAGGCAAAGTGCTTGGAGACTGGTGAAACTGTGGCAATTAAGAAGGTTCTTCA AGATAAGAGATACAAGAACCGTGAATTGCAAACCATGCGCCTTCTGGACCACCCTAATGTTGTATCTTTGAAGCATTGTT TCTTTTCTACAACTGAAAAGGATGAACTATATCTCAATCTTGTGCTTGAATACGTTCCTGAGACTGTCAATCGGGTCATC AGACACTACAACAAAATGAATCAAAGAATGCCATTGATATATGTCAAACTTTATTCTTACCAGATTTTGAGAGCACTTGC TTATATTCACAACAGCATTGGAGTGTGTCACAGGGATATAAAACCTCAAAATTTACTGGTCAATCCTCACACCCACCAGT TGAAGATATGTGACTTTGGAAGTGCTAAAGTCTTGGTTAAAGGTGAGCCGAACATATCTTACATCTGCTCTAGGTACTAT AGAGCTCCTGAGCTTATATTTGGTGCAACGGAGTACACCACAGCCATTGACATCTGGTCAGCTGGTTGTGTACTTGGTGA ACTGTTGCTTGGCCAGCCGCTTTTTCCTGGTGAGAGTGGAGTAGACCAGCTTGTGGAAATTATCAAGGTTTTAGGTACCC CAACAAGGGAAGAAATCAAGTGTATGAATCCTAATTACACAGAGTTTAAGTTTCCTCAAATTAAAGCTCATCCATGGCAT AAGATCTTTCACAAGCGAATGCCACCTGAGGCTGTGGATCTTGTCTCAAGACTTTTGCAATACTCTCCAAATCTTCGAAG CACAGCTTTGGAGGCTCTGGTTCATCCATTCTACGATGAGCTGCGTGAGGCAAATACCCGGTTGCCAAATGGCCGTTTCC TTCCTCCACTATTTAACTTCAAAGCCAATGAGCTTAAAGGAGTAGCAGCTGAGATGCTTGTGAAGCTGATTCCACCTCAT GCAAGAAAGCAGTGTGCCTTGTTTGGGTCATAA
Protein sequence (LotjaGi1g1v0756100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASGVVPPASGFTDMNTSSVVGVERLPHELNVMKIRDDKEMEATVVDGTGTETGHIIVTTIGGKNGQPKQTISYMAERVV GNGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVNRVI RHYNKMNQRMPLIYVKLYSYQILRALAYIHNSIGVCHRDIKPQNLLVNPHTHQLKICDFGSAKVLVKGEPNISYICSRYY RAPELIFGATEYTTAIDIWSAGCVLGELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWH KIFHKRMPPEAVDLVSRLLQYSPNLRSTALEALVHPFYDELREANTRLPNGRFLPPLFNFKANELKGVAAEMLVKLIPPH ARKQCALFGS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 408 | 408 | 3.5E-262 | – | |
PANTHER | 1 | 408 | 408 | 3.5E-262 | – | |
Gene3D | 58 | 153 | 96 | 2.3E-35 | – | |
CDD | 69 | 361 | 293 | 0.0 | ||
SUPERFAMILY | 73 | 382 | 310 | 1.23E-87 | ||
Pfam | 74 | 357 | 284 | 7.6E-64 | ||
ProSiteProfiles | 74 | 358 | 285 | 44.584 | ||
SMART | 74 | 358 | 285 | 7.9E-88 | ||
ProSitePatterns | 80 | 104 | 25 | - | ||
Gene3D | 154 | 402 | 249 | 3.4E-79 | – | |
ProSitePatterns | 195 | 207 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0756100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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