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LotjaGi1g1v0756100.2

Overview

Field Value
Gene ID LotjaGi1g1v0756100
Transcript ID LotjaGi1g1v0756100.2
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Protein kinase; TAIR: AT5G26751.1 shaggy-related kinase 11; Swiss-Prot: sp|P51139|MSK3_MEDSA Glycogen synthase kinase-3 homolog MsK-3; TrEMBL-Plants: tr|G7KTQ8|G7KTQ8_MEDTR Glycogen synthase kinase; Found in the gene: LotjaGi1g1v0756100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:132954235..132957479) extracted from Lotus japonicus Gifu genome v1.2.

TTGATGGCATCAGGGGTTGTGCCACCTGCTTCTGGATTCACAGATATGAACACAAGTTCAGTTGTTGGGGTTGAAAGGTT GCCCCATGAATTGAATGTCATGAAAATCAGGGATGACAAGGTCAACAACTTTTACCCCACTTTGCTTTTTCTTTCTTTGT TTCTTTTCATTCTATTGAATGTATATGAAGTCTATTTATTTATGTTAATACTTGCTGAACATAATGCAGGAAATGGAAGC CACTGTGGTAGATGGAACTGGAACAGAAACTGGACATATAATTGTCACTACCATTGGTGGTAAAAATGGCCAGCCTAAAC AGGTTTGTGTCTCATTTCTGGTTTCTGGTTTCTGGTTTCTTGTTAGTTGCTACTGATAGTTGGACACCTATATAGTCTAT GAACTTTATATATGTTTGATGTTTCAATTTTAGACAATAAGCTACATGGCTGAGCGTGTTGTTGGAAATGGGTCCTTTGG GGTAGTTTTCCAGGTTAGTCCTTTTGTAATGCTCCTTTTAGCCAACTTTAAATGCATGTTTGGAAACTCTCTTGCCATTG ATTATGAAATGGAAGGTTTCAGAATTGATTTTGATGTAAGAGAATCGGATCTGAACATGCTATAAATTGGTTTTTGGTTA GTTTTGAAGTTTTGCTGTATGCTCATGGTTATTTGTTGTTATTTTTCAATTGTGCAGGCAAAGTGCTTGGAGACTGGTGA AACTGTGGCAATTAAGAAGGTTCTTCAAGATAAGAGATACAAGAACCGTGAATTGCAAACCATGCGCCTTCTGGACCACC CTAATGTTGTATCTTTGAAGCATTGTTTCTTTTCTACAACTGAAAAGGATGAACTATATCTCAATCTTGTGCTTGAATAC GTTCCTGAGACTGTCAATCGGGTCATCAGACACTACAACAAAATGAATCAAAGAATGCCATTGATATATGTCAAACTTTA TTCTTACCAGGTATATCTATGCACTGTATTTCTTCCTTAAAGTTTTCTTCTTCTTGTAAGCTTTAAATAGATGTATCTCT TTGTTGGTTCTCATTATCCCTTCTCGTTCTTAATTGCAGATTTTGAGAGCACTTGCTTATATTCACAACAGCATTGGAGT GTGTCACAGGGATATAAAACCTCAAAATTTACTGGTATATATTCACACAGTACCTTTTATCATTTGGTTATCGTATTTGT GTGTCACCAGCTGAATTGAACTTGAATATCGATATAATGTCTGTGCTGTTTTATTTGGATACAATTTGTGCTGTTAAGTC TGTTTTTTATTTTTTGAAAATTTATGAACCTGCAAAACCTTCAGAAGATGTTTCAAATGAATATTTGAAAGTTTAAGTTT GAGCATTTATAAATTGTTGCCTTACATTCCCTTTACGATGGAGAAAGAGTGATTTTTGGTTCTATCTTCTGGATGTTGTC ATAACAGGTCAATCCTCACACCCACCAGTTGAAGATATGTGACTTTGGAAGTGCTAAAGTCTTGGTTCGTTTATTCTTAA CCTGAAAATCCCATTGTCCGTTTTCAATGACTGTCTAATGTTTTATATGACCATATGCTGCTCATGTTTTACAGGTTAAA GGTGAGCCGAACATATCTTACATCTGCTCTAGGTACTATAGAGCTCCTGAGCTTATATTTGGTGCAACGGAGTACACCAC AGCCATTGACATCTGGTCAGCTGGTTGTGTACTTGGTGAACTGTTGCTTGGCCAGGTAGATATCTAGCTTTCTCAAGTAT GTATTCTAGTACATCTAAAATTCACAGATGTATAGAAACTAATAATCAATTTTTGTTTCTGCCAGCCGCTTTTTCCTGGT GAGAGTGGAGTAGACCAGCTTGTGGAAATTATCAAGGTATGATATGTTTTAGATTAATACAAGTTTAGACTGTAAGATTC AGGCATTCTGATAAGTGCTGGTTTTCTCTGGATGGTCCCTCTTAGAATTATAGGGCCTAACCCGAATTATAAGATGTATC AGAACATATTCTAGATCCGTTTGTTGGACCATGCAAAAATAGGCCACCCACAAATGTCCAATCCTGTAAGATTCATGCTC TAGATGTCCATCCTTGAACGTGAGTGGTGTATTAGGGATCCACACATCGACTACAGATATGACCAAATTAGACATGACAT AGGGTTGAGTAATTCTCATCTGTCACCCCTGAGCTAACTTTTTGGGACAGAGCTAAGCCTAACTGGAACTTTTAGAGTCT GAACTTTGAAGTTTGAACAAGCACCCTGTGCAGGCATAAGTGACTATGTGACCTTGTAACTAGCTTAAGTATATCATTAC AAAGTGTCCTTGTTTCTTCTTTCTGTCTTGTTGAATGGTACATTTAGTTACATTACCTCTGAAGATTATTGGGATTGGCT TGCAGGTTTTAGGTACCCCAACAAGGGAAGAAATCAAGTGTATGAATCCTAATTACACAGAGTTTAAGTTTCCTCAAATT AAAGCTCATCCATGGCATAAGGTATAGTAATATTTCTTTTTTGTCTTTTTAGTTCCTAACTTCTTATACCATATTATATT TATCTGTTTATGGTTCTTTATCAGATCTTTCACAAGCGAATGCCACCTGAGGCTGTGGATCTTGTCTCAAGACTTTTGCA ATACTCTCCAAATCTTCGAAGCACAGCTGTGAGTACATAATTTCATACAATATAGATTTTACCTTTTAGACAGTTTTGTG CCTGAGCATTATATGGCTGCATTTGCATTACACTATTACTACATAATGCATGTAGTTCCTTATAATTATGTTGTGTTTGA TTTTCAAAATTCTACCATGTAGCTTTGGCATATGACATGCCATATATGTCACTAATGCAAATGTAGTTGGCCGAAACTTT CTACTTCACAGCCGAATATGTGGTTAAATATCCATAATTGTTTCCAATTGAACGTTATCTTAAACTACGTTGTTTGTGCC ATGTAGTTGGAGGCTCTGGTTCATCCATTCTACGATGAGCTGCGTGAGGCAAATACCCGGTTGCCAAATGGCCGTTTCCT TCCTCCACTATTTAACTTCAAAGCCAATGGTAAAGAACCAATTTCCAGATAACGATTGTGTTATTACTTGTTGTAATCTC TCAAAGTTCTCAGTTAATGATGTTTCTGAAAATCTGATGCAGAGCTTAAAGGAGTAGCAGCTGAGATGCTTGTGAAGCTG ATTCCACCTCATGCAAGAAAGCAGTGTGCCTTGTTTGGGTCATAA
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0756100.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCATCAGGGGTTGTGCCACCTGCTTCTGGATTCACAGATATGAACACAAGTTCAGTTGTTGGGGTTGAAAGGTTGCC CCATGAATTGAATGTCATGAAAATCAGGGATGACAAGGAAATGGAAGCCACTGTGGTAGATGGAACTGGAACAGAAACTG GACATATAATTGTCACTACCATTGGTGGTAAAAATGGCCAGCCTAAACAGACAATAAGCTACATGGCTGAGCGTGTTGTT GGAAATGGGTCCTTTGGGGTAGTTTTCCAGGCAAAGTGCTTGGAGACTGGTGAAACTGTGGCAATTAAGAAGGTTCTTCA AGATAAGAGATACAAGAACCGTGAATTGCAAACCATGCGCCTTCTGGACCACCCTAATGTTGTATCTTTGAAGCATTGTT TCTTTTCTACAACTGAAAAGGATGAACTATATCTCAATCTTGTGCTTGAATACGTTCCTGAGACTGTCAATCGGGTCATC AGACACTACAACAAAATGAATCAAAGAATGCCATTGATATATGTCAAACTTTATTCTTACCAGATTTTGAGAGCACTTGC TTATATTCACAACAGCATTGGAGTGTGTCACAGGGATATAAAACCTCAAAATTTACTGGTCAATCCTCACACCCACCAGT TGAAGATATGTGACTTTGGAAGTGCTAAAGTCTTGGTTAAAGGTGAGCCGAACATATCTTACATCTGCTCTAGGTACTAT AGAGCTCCTGAGCTTATATTTGGTGCAACGGAGTACACCACAGCCATTGACATCTGGTCAGCTGGTTGTGTACTTGGTGA ACTGTTGCTTGGCCAGCCGCTTTTTCCTGGTGAGAGTGGAGTAGACCAGCTTGTGGAAATTATCAAGGTTTTAGGTACCC CAACAAGGGAAGAAATCAAGTGTATGAATCCTAATTACACAGAGTTTAAGTTTCCTCAAATTAAAGCTCATCCATGGCAT AAGATCTTTCACAAGCGAATGCCACCTGAGGCTGTGGATCTTGTCTCAAGACTTTTGCAATACTCTCCAAATCTTCGAAG CACAGCTTTGGAGGCTCTGGTTCATCCATTCTACGATGAGCTGCGTGAGGCAAATACCCGGTTGCCAAATGGCCGTTTCC TTCCTCCACTATTTAACTTCAAAGCCAATGAGCTTAAAGGAGTAGCAGCTGAGATGCTTGTGAAGCTGATTCCACCTCAT GCAAGAAAGCAGTGTGCCTTGTTTGGGTCATAA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0756100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MASGVVPPASGFTDMNTSSVVGVERLPHELNVMKIRDDKEMEATVVDGTGTETGHIIVTTIGGKNGQPKQTISYMAERVV GNGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVNRVI RHYNKMNQRMPLIYVKLYSYQILRALAYIHNSIGVCHRDIKPQNLLVNPHTHQLKICDFGSAKVLVKGEPNISYICSRYY RAPELIFGATEYTTAIDIWSAGCVLGELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWH KIFHKRMPPEAVDLVSRLLQYSPNLRSTALEALVHPFYDELREANTRLPNGRFLPPLFNFKANELKGVAAEMLVKLIPPH ARKQCALFGS
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR24057
1 408 408 3.5E-262 –
PANTHER
PTHR24057:SF45
1 408 408 3.5E-262 –
Gene3D
G3DSA:3.30.200.20
58 153 96 2.3E-35 –
CDD
cd14137
69 361 293 0.0
IPR039192
SUPERFAMILY
SSF56112
73 382 310 1.23E-87
IPR011009
Pfam
PF00069
74 357 284 7.6E-64
IPR000719
ProSiteProfiles
PS50011
74 358 285 44.584
IPR000719
SMART
SM00220
74 358 285 7.9E-88
IPR000719
ProSitePatterns
PS00107
80 104 25 -
IPR017441
Gene3D
G3DSA:1.10.510.10
154 402 249 3.4E-79 –
ProSitePatterns
PS00108
195 207 13 -
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0756100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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