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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0118300 |
| Transcript ID | LotjaGi2g1v0118300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|I3S288|I3S288_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0118300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:43379872..43384265) extracted from Lotus japonicus Gifu genome v1.2.
GCATGATGCATAATCATGCGCCTTTGATCTTCGTACTCATTTTCTTTTGCAGCCAGATTCGTATTCGCAACTCGTGAGAA GTATCCAGGAGCTAGCTGCCAGTTATGATCAGGCCAGTGTCGTCATTGTGAAAATCTTCTCTACAGGTGAAAGGTACTAT GTTCCTTTCTGATTTCCTTTATATCACTGGAGGTTCTCAAAGATATTGAAGTTTTATAAACTAAACTTCAAAAAATTATC TCCTTAAATTTAGGTGGTGGAAATTATTGTTAGTTCTTTAAGAAAGGTACTATCTTCCTTTCTTATTTCCTTTTTGTGCT ACTGTTGCTTTGAAATTTCAATTTTTTATGTATTTATAGCATTTTAAATGGAGTTTTGAGACTTGGCAGATTGATGCTTT GGAATCACAGTCGAAGATCACTTGCGCGTTCAGTAGTTATTAATCAAAGCTTGCACTGACTTGATCTTGTTTCAATTTGC TTTCTTAAATTGATTCATGTTGTGCATTTTAAATGGAGTTTTAAATTGGTGATTTACCCCGATTTATTTTCTAGCTAATC TTGTCTTTTTTTTTTTGTTTTTTAAATTTTAGCTAATCTTGTCTTTACCCAAGACAAAGAAGTGAATTGTGACTTTCATC AATTAATCTATCTTGGCATCACACGCCTACAATCATCCCTCCACTCATCCACATGAAATTAATCACACAATAAAATATCA TAAGATCACAAATTAATCCATGTTCAAAAGTAGTAGCATTTTTTGCATACCCTTCAAATAACAATAAAACAACGGGTCAA GGTATGACATTATTTTCCGTCATCGGAAAAATGATATAAATGGTAAAATAAATTGGCTCAATTAAAATCATCACATAATA AATATTCTTATAAAATATTTCTTGTCTGCTTGCGTGAATAATAATTGACATATGAATATTTTGTAAAATAGCGTACAACG CCAAGATTACAAAAATTAAATAAAAAATATTTAGGGGTGTTGCTCCGGTACACATTGAATATATGAGAGTATAATACCCT TTAGTTCATTTTTTTTTATCTAAATTTTAAATTTTAAAAAGTTTATTAGGATAAAACATTACTAAATGTATGGAACCTTC ACTTTTGAATGGATAGGGTAGTAAAGAAATTGCCTATGAAATGGAGCCATGGAGGTGTTAAAGTCAAAGTCAAAGGTAAT GGAGGGCAGTTAACTTAAACGAAAAGGAGAAGAAGACCCAAGTCAGTTTCAGAAGAATAGAGAAGTGGTTCGTGGTGGAG GGATGGCGAAGACGACGGGTGAAAATGAGTACGATCATCTATTCAAGCTGGTGTTGGTCGGCGATTCTGATGTCGGAAAA TCCAATCTTTTAACCCGATTCTCTCGCAACGAATTCTGCTTGGAGTCCCAGCCCACCATCGGCGTTGGTTTCCGAACTCG TATCCTTGAGGTCAGGACAATTTCTCACTTTCACTTCATCAGAATTGTTATTTTAATTTTACTTGTTCTAAGTCATTAGT TCCCTTCCCTCACTGCCCTGCTTCATTATTCATTTTTTAGGCATATATACCATTCTATAATAGAAAGAGTCGTCACTACA GATTGCTCTTATTTTACCTTTCTATTAGAAAACCTATTCTTAATTTTTTAAATCTCTAAAGTCTAGACACGAGGAGAGGA ATGAATTGAATATGATATATTGAATTGTTAATGATATGTGATTATGTATCAAATGAGTAAAGCAAGAGTTATCAGAATGT GGGGCATAATATTATAATATATGCAGGTTCAGGGAAGAATGGTGAAAGCTAAAATATGGGATACGTCAGGTCAGGAATAT TACAGGACAACGGTTATGTCATTACTGGGTGAAAACCGTAACAAGGCTGCCGGAGCTCTTCTTGTCTATGATGTCACCAA ACCAGCCACTTTCGAAAACGTAACCACATGGCTGAAAATGATCAGGATCACGCTGATGCTGACATTGTAATCATGCTGAT GGGCAACAACACGGATTTGAAGCATCTCCGTTGTGTTGCCACAAAGGATGCGCAGAGTTATGCCGAGAAAGAAGGCCTCT CTTTCATCGAGACATCTGCTCTGGAGGCAACCAATGTTGACAAGGCATTCAAAACCATCCTTGCACAAATTTTGACAAAG CATTCTGCAACTCCACCTCTAGAGTCCATCCCAATTTTGTCTGCAAACTCCTTGTCTTCTGACTCTACCGAGGTCGAAGC AAGTACAAAAGGTAACGGGGGGTTATCCCATCGAGCTTCTTTATTAAATCAACTCATGTCTCCACTTGTACAACCCTCTA ACTCCATCCAATCTTCAGCTGTCAAGTCCACCCAATCTCTTGCAGAGTCCATGCCTGTTGAGTTCAACATTTTAGCTGGG AAGTCTAACAAAGAAGCTCCTTATCAAGAGTTGGAGGCTGATGCTTTCCAAGGTTTACAGTCATCTTCAGGAAACTTCAG GTATTTGGGCTCTACGAATCAGGCTAAAGATGATCTGTTGAAGGCACTACAAGATGATAAATACCATATTGTTGGATTGT TTGGAGAGAGGGGCTTTGGTAAAACAGCTCTAGTGAAGACTGAGATACCGAAGTATAAAAATATTTTTCATCCAGTTGTA TTTGTCACTGTGTCAGAAAAAGGAGATATCGCGAACCTTCAAAACCAAATTGCTCCTCAGTTGAATTTGAATTTTCAAGA AGTTAGAAGTCAATATAAAAGAACATCAGCAATTGAGTCGACATTATCAAAAAGTAAGGATAAAGTCCTTGTCATCTTTG ATGATGTTTCCACAAACTTTGGTCCTCAAAATATTGAAGATATTGGCATTCCTGATCCTAGTAAACAGTGCAAGATCCTT TTGATCACACATGAGAAAAAGTACTGCAAAATGATCAGATGTCACCCTTGGATCCATCTGGGTCCCTTATCTGATGAGGA TGCTTGGAAGCTGCTCCAACAATATTCCGGCATAGATCGTGACTCCCCACCCGACATATTCAAGGTGGGTCGTGAAGTTG CTTTTCAATGTAAGGGGTTACCTCGTGTAATCGAAGATGTGGTGTCTTCCTTACAAAATAAGAACACTGAATACTGGACA GAAACATTAGACTGTCTAAGGCATACACCAGCCTGCCACCAGATTTTTATCAGCTTTAGAGGAAGAGATACTCGCGACCA TTTTACCGCTTCTCTCTTTGAAGATTTGACCCAAGGAGGATTCAAGGTCTTCAAAGATGATGAACAGCTGCGGAGTGGGG ACCAAGTTTCTGAAGCTCTTATTAAAGCAATTGAACAATCAAGGTGTTCAATATTTGTCTTGTCTGAAAACTATGCAGAA TCTTCTTGGTGTCTTGACGAACTTGTCAAGATTCTTAAGTGCAGGGAAGAGATGAAACAATTGGTTTTGCCAATCTTCTA CAAAGTGGATTCCTCATACGTGAGATATCTGAAAGGAAGTTTTGGCGAAGCCATTACCAAGAAGAAAGGAAGGTTCAAAG AGGATAAGATACTAGAATGGACTTCTGCTTTGTTCAAAGTTGCTGGTTTGTCTGGAAGGGACTACAAAACTGGGTAAGTC GTAGTATCCTTCCATTTGTTTTCATTCAAATTTCATGATTAATATATAGTCTCATAGTACACAATGTTAATAAAGTGATT AATTGTTTTCCGAGGCACCAAAAAAAATAAAGTGATTAATTGAAATGCCTTTTCTATACTTTTGCAGGTCCCAAATTATT TTTATCAAAGAGATTGTTAAATATGTCCGAGATAATAAACATCGCTTGCATATTGTATAAAGCAGACTTATGGAATACAA GGGAGATTTTTGTTTCTCTTATTTCCTTTCTGTGCTACTGTTTCTTTGAAATTTCCTTTTTTTTATGTATTTATAGCATT TTTAATGGAGTTTTGAGACTTGGCAGATAGATGCTTTGGAATCACAGTCGAAGATCACTTGTGCGTTCAGTAGTTATTCA TTAAAGCTTACACTGACTTGATCTTGCTTCAATTTGCTTTCTTATTGATTCATGCTGCTGCAGATTCTGAACTGTGTCTT TCTATTTTTTACTACTAATTGTAAATATTCTATTGAGGATTTGGGGACCTCACACTTTGTATTTTCACTATTTGTCTTTG AGATGGAAATGGTTGCTCCTCAAATTGGGGATAATTGTTAATCATAGGGATTGTTCTCTATGAGTTTGAGTTGTTTTGCC GGTTGAAGACTCAGGTAAATTTATGTGATAAACTGAGTTTGTTTGTATTTGAAATTAGTATGACCTCATTCCTAAACTTG GGTATAAAAATTTCATGCCCACTAATTGCTTGATGAAATTGTTTGAATGGATATTGAACTTACCAATAGCATCC
CDS sequence (LotjaGi2g1v0118300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGAAAATGATCAGGATCACGCTGATGCTGACATTGTAATCATGCTGATGGGCAACAACACGGATTTGAAGCATCT CCGTTGTGTTGCCACAAAGGATGCGCAGAGTTATGCCGAGAAAGAAGGCCTCTCTTTCATCGAGACATCTGCTCTGGAGG CAACCAATGTTGACAAGGCATTCAAAACCATCCTTGCACAAATTTTGACAAAGCATTCTGCAACTCCACCTCTAGAGTCC ATCCCAATTTTGTCTGCAAACTCCTTGTCTTCTGACTCTACCGAGGTCGAAGCAAGTACAAAAGCTGTCAAGTCCACCCA ATCTCTTGCAGAGTCCATGCCTGTTGAGTTCAACATTTTAGCTGGGAAGTCTAACAAAGAAGCTCCTTATCAAGAGTTGG AGGCTGATGCTTTCCAAGGTTTACAGTCATCTTCAGGAAACTTCAGGTATTTGGGCTCTACGAATCAGGCTAAAGATGAT CTGTTGAAGGCACTACAAGATGATAAATACCATATTGTTGGATTGTTTGGAGAGAGGGGCTTTGGTAAAACAGCTCTAGT GAAGACTGAGATACCGAAGTATAAAAATATTTTTCATCCAGTTGTATTTGTCACTGTGTCAGAAAAAGGAGATATCGCGA ACCTTCAAAACCAAATTGCTCCTCAGTTGAATTTGAATTTTCAAGAAGTTAGAAGTCAATATAAAAGAACATCAGCAATT GAGTCGACATTATCAAAAAGTAAGGATAAAGTCCTTGTCATCTTTGATGATGTTTCCACAAACTTTGGTCCTCAAAATAT TGAAGATATTGGCATTCCTGATCCTAGTAAACAGTGCAAGATCCTTTTGATCACACATGAGAAAAAGTACTGCAAAATGA TCAGATGTCACCCTTGGATCCATCTGGGTCCCTTATCTGATGAGGATGCTTGGAAGCTGCTCCAACAATATTCCGGCATA GATCGTGACTCCCCACCCGACATATTCAAGGTGGGTCGTGAAGTTGCTTTTCAATGTAAGGGGTTACCTCGTGTAATCGA AGATGTGGTGTCTTCCTTACAAAATAAGAACACTGAATACTGGACAGAAACATTAGACTGTCTAAGGCATACACCAGCCT GCCACCAGATTTTTATCAGCTTTAGAGGAAGAGATACTCGCGACCATTTTACCGCTTCTCTCTTTGAAGATTTGACCCAA GGAGGATTCAAGGTCTTCAAAGATGATGAACAGCTGCGGAGTGGGGACCAAGTTTCTGAAGCTCTTATTAAAGCAATTGA ACAATCAAGGTGTTCAATATTTGTCTTGTCTGAAAACTATGCAGAATCTTCTTGGTGTCTTGACGAACTTGTCAAGATTC TTAAGTGCAGGGAAGAGATGAAACAATTGGTTTTGCCAATCTTCTACAAAGTGGATTCCTCATACGTGAGATATCTGAAA GGAAGTTTTGGCGAAGCCATTACCAAGAAGAAAGGAAGGTTCAAAGAGGATAAGATACTAGAATGGACTTCTGCTTTGTT CAAAGTTGCTGGTTTGTCTGGAAGGGACTACAAAACTGGGTCCCAAATTATTTTTATCAAAGAGATTGTTAAATATGTCC GAGATAATAAACATCGCTTGCATATTGTATAA
Protein sequence (LotjaGi2g1v0118300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAENDQDHADADIVIMLMGNNTDLKHLRCVATKDAQSYAEKEGLSFIETSALEATNVDKAFKTILAQILTKHSATPPLES IPILSANSLSSDSTEVEASTKAVKSTQSLAESMPVEFNILAGKSNKEAPYQELEADAFQGLQSSSGNFRYLGSTNQAKDD LLKALQDDKYHIVGLFGERGFGKTALVKTEIPKYKNIFHPVVFVTVSEKGDIANLQNQIAPQLNLNFQEVRSQYKRTSAI ESTLSKSKDKVLVIFDDVSTNFGPQNIEDIGIPDPSKQCKILLITHEKKYCKMIRCHPWIHLGPLSDEDAWKLLQQYSGI DRDSPPDIFKVGREVAFQCKGLPRVIEDVVSSLQNKNTEYWTETLDCLRHTPACHQIFISFRGRDTRDHFTASLFEDLTQ GGFKVFKDDEQLRSGDQVSEALIKAIEQSRCSIFVLSENYAESSWCLDELVKILKCREEMKQLVLPIFYKVDSSYVRYLK GSFGEAITKKKGRFKEDKILEWTSALFKVAGLSGRDYKTGSQIIFIKEIVKYVRDNKHRLHIV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 112 | 112 | 12.451 | – | |
| Gene3D | 2 | 79 | 78 | 2.4E-15 | – | |
| SMART | 3 | 71 | 69 | 2.1E-5 | – | |
| Pfam | 6 | 69 | 64 | 2.7E-13 | ||
| SUPERFAMILY | 7 | 76 | 70 | 4.99E-11 | ||
| PRINTS | 11 | 24 | 14 | 2.0E-8 | – | |
| PRINTS | 46 | 68 | 23 | 2.0E-8 | – | |
| Gene3D | 148 | 298 | 151 | 2.8E-16 | – | |
| SUPERFAMILY | 154 | 372 | 219 | 1.2E-34 | ||
| Pfam | 157 | 369 | 213 | 2.5E-25 | ||
| Gene3D | 370 | 540 | 171 | 3.6E-58 | ||
| PANTHER | 371 | 533 | 163 | 4.5E-59 | – | |
| PANTHER | 371 | 533 | 163 | 4.5E-59 | – | |
| SUPERFAMILY | 372 | 515 | 144 | 1.26E-36 | ||
| ProSiteProfiles | 373 | 512 | 140 | 24.92 | ||
| SMART | 374 | 512 | 139 | 6.1E-41 | ||
| Pfam | 375 | 533 | 159 | 1.5E-44 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. | ||
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. | ||
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi2g1v0118300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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