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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0146500 |
| Transcript ID | LotjaGi2g1v0146500.1 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ankyrin repeat-containing protein, putative; TAIR: AT5G07270.1 hypothetical protein; Swiss-Prot: sp|Q4FE45|XB33_ARATH E3 ubiquitin-protein ligase XBAT33; TrEMBL-Plants: tr|V7C2F7|V7C2F7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0146500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:52723847..52731478) extracted from Lotus japonicus Gifu genome v1.2.
CCAAGAAAGTCAAAGCAAAACACAGAATGCACGCAGAAGAAGAAAAGAACAAAAGAGCAAGTAAAAGCAATTCATTCACA CTGTTCTTGTTTTTGGCCTTTCCCTTTTGTTCTCTTCGGACAACCATTACCCACGTTTCAAGCTTCAAGTCTTCAACCTT TGTCTTCTACCCATCTCACTGTCTCACACACAGAAAGAGCTGCCACGTCACCATCACACCGAATCCAAAAAGCAAACCAA ACCAAAGAGCTTTTCATTTTTCTTCACATCATAAATTAATGTAATAATGAATACCCCATTGCGTGAAGATTTTGATCTGT GTTGTTGTTGGGTTTTTTTGTTGACCCCACCATTGTTTTGCTTTGAAGATTTGCTCTCAACACACACACAGAGAGTTTGA GAGAGATGGGAAATTCATTTGGGTGCTCAGCTTCCGGCGAGAGGCTGGTGTCGGCGGCGAGGGACGGCGATTTGGTGGAG GCCAAGATGCTTTTGGAATGCAACCCTGGTCTTGCCAAGTACTCAACCTTTGGTGGCCTCAATTCCCCTCTTCATTTTGC AGCTTCCAAGGGCCATAACGAGGTTTCTCATCTACCCTTTTTCAGTTTTGCCCTTTAATGTTTCAAAGTTTGTGTTTTTG CCATTTTCATCAACACCCTTTTCTCAATGTTTCATTTTTTCAAATTAGATTGTGGCGCTGTTACTTGAGAATGGAGCTGA TGTGAATTCAAGAAATTATTGTGGGCAGGTAGGTACAGTTTTCATTTTGGTGTTTATTTTTAAACATATATCAGGTTGAT TGATTTAAGTTTTATGGATATTGTTTTTGATTTGTCGAATTTGCTTGATATTGTTGCAATTGGTGTTGTTGGAAGATTCC ATCCTGTGTTAGAAATTGCAAATTGAGTTTTCCCATTTTGGTTCAGCTACCTACCTAGTTTTGAAGTATGATCCTATTCC ATGTTGTGTAGTATGATTATTGACAGATCAGTGGATCCGGTGCCTATTCAATAGATGATATATCTAGTGCTTTCCTTTTC GATTCACTTATATGGTGCACTGACTAAGAATATGGTTTGCTAAATGATGATTTTTGGTTACTGTGATCCTTGATTTGTAG ACGGCTTTGATGCAAGCTTGCAGATATGGTCATTGGGAAGTTGTACAGACCCTTCTGCTCTTTAGATGCAATGTGAGTAC GGTTATAACTGATGCTGAACTGTCTTTCTCTATTACATAGTGTTTACTGTCCTATAGTGAGTTAGAGACCACAGGTCACA GGCCTGGTACTTGAAACTATGTGCTGGGTGGGAATTGGATTGTTGGTCTTCTTCTAGTGTATTTTCCTATTACATGGTTA AAGTTTCTTTTCAACAATAACTAGACCCTATTCAATTTAATAACAGGTTATGAAAGCAGATTATCTCAGCGGAAGGACAG CTCTTCATTTTGCAGCTGTCAATGGGCATGTAAGATGCATTAGACTTGTTGTGGCTGACTTTGTTCCAAGTGCGCCTTTT GAAGCTTTACACTCTCGCACGGATCCTAACATGAGCAGACATGAGCATGGGTGCGCCTTTCCTTTTCATTATATAATTCC CAAACAATGTATTATTGTAAATTTCATGTATTTTTACTTTTATTTGATAATGTTGAATGACTAATATACTTTCGCCATCT GTTACGTGCTTATATTATAATGTTTTTTGTATTTATTTCATCATGTATTTAGTATTTCATAGACTCACTTTATTTTTTCT GCATTTTCATAAACATACAGTTGTGATTTTTATTACTAAATTCATGGTTAATTTTTTGTGGGTAGTAGGACTGATAGGAG TTAGGCCTCTTAAGAAGAGGTTGTTATTGTAAGTAACTAGCCAATAGTTGTTATGGTTAGCTAGTTAATGAGTTAGATAG ACTGTTACAGTGAGGAGATATTATAAATAAGAGGGAGAGAGAAATAGGAGGGTATCAAAATTGTAATCAGGGAAATTAGG GAGAGCCCTGGTCTCTCAAATAGCAGGGAATTGGTGTATCTCTTGTTGTTCATTGCTGGTACCTATCAATGACAATAAAT TTCATTCAGTTTTTTTTTGTATTTTTTTTATATTAAGAATATTTAAGGCCTGACTGTACAATGATGTGTAATTTCTATAT GTTATATTCTTGCTATTTATTTACTTTATTCCAGTGCAGTGCCCTGTCCAAGTTTGTAAATAAAACAGCTGATGCTGGTA TTACTGCTCTTCATATGGCTGCACTAAATGGGTATTTTGATTGCGTACAACTCCTACTTGATCTTAATGCAAATGTGTCA GCTGCAACATATCATTATGGAACTTCGATGGATTTAATAGGTTATTATTTTGTTTAATATGCTACTACATCTATGGTTTT CTCTTTGCCCCTTGAAAATTACTGATAAGCATCAGTGCATGTAGGGGCTGGAAGCACTCCATTGCACTATGCTGCTTGTG GGGGGAATTTGAAATGCTGTCAGGCAAGAATTTCCTTAACTTTGAATCTTTGATGTGTGATAAATGATAATCCATCTGGT CAGCTGGTCTATTTCTTTGAATCTGTCAATGATGGTCATATTTTTCCAGATCCTCCTTTCAAGAGGTGCGAGTCGGATGG CTTTGAATTGCAATGGGTAAGATATTGTAAAATGGAAATTCTGGTGCTAAGTTTTGCTTGCCCCATAACATGAATTATAC AAATTTGAATTTTCCCCCAGGTGGCTTTCACTTGATGTTGCTAGGATGTGGGGGCGTCATTGGCTTGAACCGTTGCTGTC ACCCACTTCTGATGTCATAATATCATCATTCCCTGCTTCAAATTATTTGTCCTTGCCTCTCATGAGTGTGCTCAACATAG CCAGGTATTTTTACAGTAAATATATCTTGATAATGAAAATGACAAAAGTAAAGGGAACAGTTGTGGAACTGGAAATAGTC TAGGGACCAAAATTAGCATACAATAATGATAACAGCAAAATCTTCTCCTACTAGGTGAAGTCTAAAACATGGATCACATG ATGCTATAATACCTTGTCTAAGTTAAAAGATAGACCATTTACCTCAAATATCTCTTAATGATTTTGCCTTAAGTTTTCCT TGGTCTCACTATGTCTTTAATTATTTGATAATTCTCCGTCTCCTCCATCTAGTCAACTCTTCCTATGGATGCCTCTATGC TGATGCGACTGTATTGAGAATTAGTGGTTAGTTCAGTTGAATTAGTGGGTTAGTTCAGTTAGGAGTTAGTTGAGTTTGGC GGGATTGGCTATATAAGCCATTGTGTGACCCTATAGTTGTAATGTTGAATGTTATGAGTTCTCTCTTCCCCTGTTTCTCT CTTCTCTCTCTCTATATCCTCTTCTCCCCCTTTCTCTCTTATTCCTATATCTGATCCTATCATATGCTCTTCTCCACATA TGCCCAAAGTCCAAACCACCTAAGGTGAGACTCTACTGCATATGCCCAAAAAACCTATAGAGGCTATCTCAACTTTCACT CAAATGATTGTGTTTGTATTCCTAATTCTATCTAATCTCTTGTAACTACTCATCATTCATCACTAAGTTTAACTTCTTGT TGGCTCTTAAACACTCGACATTGGTGTTATACAACATTGCAAATCTCATTATAGCTATGTGTAAAATTTTCCTATAGCTT GAGTGATACTTTCTATTGCAGGTCACGCTTGAATCTTGATCCATTTCATCCACATTGCTTGAATCTCATTATTGATATTT CCCTTTATCTCCCTGTCATTATGTATGTTAGACCAAAGTACTTAAAAATGTGAGATTTGTGGTATTCTCTTATTTTTACC TCTACTCTTATGATTTGGTTGTCTCATGCTAAACTTGCATTCCATATACTCTATTTTACTTTTATTCAGACAAAAGCCAT GTGTTTTCAAGGCTTGTCTTCATATCTCTAACTTCTATTTATTTTCTCCCCTCTCAAACTAAGACTACATTGTTTGGAAA AAGCATGTACCATGCCACCATCTCTTAGCCTTATATCATAATCATGTCTAGAACCAAGATAAAAAGATAAGGGCTCAGTG TTGACCCTTGTTGCACACCTAGTTACAAGAAAATATTTTGTATTCTCACCTTACATTCTCCCACTAGTCATTGCTCCTCA TACATGTCTTTGATTGCTTGAACATAAGCAATCAACCTCGTTTCTTTATAGTCTTCGAAAAAAAATTGTTGAGTGCTTAA TCGTGTCTTTTTCAATTCAATAGGTGTAGGTCTATTTGATTCCTCCAATGTCTCTCCATCAGTCTTCACAGAAAATATAT GGCTTCCGGGGTGGGTCTCCCTGATATATAAAACCAAATTGATTTTTATAATATGGGACAACCGTCTTAATCTATGCTCA ATGACTCTCCCAACCCTCTATAATTTACAGACATTTATATGTTAGTTTTGTTATTGAAGATAGAGATTAAGTTAAACAGC AAAATAATTATGGGAATATAGGGTGCTCTACACCCTCTGTTAATAAATAAAAGGAAGGAAAATGGTAAGGATGCCTGAAA TTGCGAACCATCAGTGTGGAAACTTAATTTTCTCCTTACAAGAAAGACTCAATAATGGACCTTGTCCAATTTCCAGATAT GCAAAATGGATGTTATTACTTCAGACTTTTACTATTTGTCCTTCATGATAAATAAATATCTACATTAATTCTTCTGATTA GTGCATGTCTAATGTGATGTCAACAAGTAACTGTTGCAAATTGGGAGGTCCTTTAGATTCTTGGCTTATTAAAAATATCA AACAAGTGGTCACTAGAATGATTAATGTTGCTGTGTATCTGATGAAGTATTTTATGATGTAAAATACCCTAAGAATTAAA ATTGATTCTCCTTTCCACTCAAAATCAACTGGGTATTTAGTTTTTGACCTGTGGCGTAAGTGGTATTCTTCTCGATTCAC ATTGCCTACTTGGGTCCCGTCATTCTTTGGATTCGGATGCCGACTATTCTGGATTCGGGACTTAGTCATAAGGCTCTTCA TCCCTCCACCGAGTGATCAGATTCGAGAGCTCTTCCCACACACTCAGCCTAGGTTGCTAACTACCCCTCGTGGGTAAATC CTTTTTATTTTAGTTGTGCATAAATAGAAAATCACTCTAATTTGGTTGGTCTTGAGTGGGTTCTAGTTTTAATTTTTTGG AATGTCATTTTTGTCTCATTATTTCAGTCATTGAACCTCAGTAATCACTCTAAAGTAAATTGATTATCCCTCACCTTGCT TTATCATATGATATACTATAACTTTGTAGATGACTTTTAATTTGAAATCAAAATATGTTCTTTTTTGGTACTTATTTCTT TTAATGGCATCTATTATCCAAAAAGTTTTAATATTTTAAGGTTGGTGTTTCTTGCTTGTCAATTCCTGTGTTCTGTGTCA TCCCATGCTTTCCATCTCAAATTTTGTCCGCAAAACAGTAAAATAATAGAATAGGCTTTCCTTTCTTCTATATTTCCATG ATGATCTAATGGTAGTAATAATAACTATTAGGACCATTATCCTTTCTGATCCATTCCTGAGGATTCTCACTTCTTTTAAT CTAAGGTTCCAGCTATGTTAATCTATCACATTATGACACATTTTGGCTGTGAATTGGAAAACAGTTGCACAGCTCTTATG ATCTGATTATTCAAGTACTTACTGAAGTGAATGTATGAAGATCTGCATCTTTGCTTTTCTATTGTCTATAATACAAGTTA TCTTATTAAATGGTGATTGACTAGAGCTGAGAACAGGGATTAGTCATTTTTGTGCTATATGTAGGCTGAGACATATGCAG ACAATGCGCTTTCCACAAGTTATTCATGATATAGGGCCAGTGAGAAAAACTATATGCAATATGGACTATTTCTTTTAGAT TAGGAGCACGGCCAAAATGATCCCACTGTGGGCCCTCCCCTTGTTTTGATTAGAATGAAATGTTCCTATCATATGACTCT TAAGATATGTAATACTACCAAAATAGTGAAGTTCTCACTTACCAATACACTGAAAAAGGAGAAAGAGAATTTCGTTGTTT TGGTTGTTTTCCATTTCCTTATGTACCTAGCTAGAGTTAAGATTTGATATCTTTTGTTTACTCCTAACACAAATATAATT AAAGATTGATTTGAATAATTGCAGAGAGTGTGGATTGCAATCATCTACAACCTCCTCTAATGAGATTGACTTTTGTGCTG TCTGTCTGGAGAGGCCATGTTCTGTGGCTGCAGAAGGTACTGGATTCTATCTTTTGAATTTTGGTTAATGTTCGCCTGCC TGTCTGCATGAGGATATCTAATGAACCACAATTGCTTTCTGAATTAATGAAGCAAAGCAATATGTGATTTCTTGAGCCAA GAAAATCAGTTATATGTAGTCATTTCCTTAGTTAAATAATCCCAAGATTTCAGAAAGGGTGGAGGTTGTCCCTTTCTCAT TCTCTTTGACACTATATTTGCAACTTTTGATTTTTATGAGAACTGAAATCAATACATACTAAGTGTTTTTAGGGATACTA GTTGAGTGCAACGTGAACCGACTCTTATCCCAATCCACAAGAAGAGTTCTGTCACTTTTTGTCTCGAAGTGAATGCTAAC ATCCGTTTGCACCGGTGCCAACGAGTATCCAAACGTAGTATACTTTGTGGATGCTTTTTTTTTATGTTTACTGTAATTGA TCTAAAAGAAATTTACATGCAGGATGTGGGCACGAGCTTTGTGTAAGATGTGCGCTCTATCTTTGCTCAACAGCCAATGT TTCTTCAGAAATGCAGGGCCCTCCCGGCTCTATCCCTTGTCCCCTTTGTAGGCATGGAATAATCTCTTTTGTCAAGTTAC CAGGTTCCCAAGCAAAAGAAAATAAGTTACATGCGTCTCTCAGCCTGTGCACCCCATGCATACAACATCCACGACGCGAC CTAGATCCACAATCTCATACACCAGAGATTCGAAGAAACCGTGTAGCTTCTGTTTCTTCTGAGATGCTTTGCCCTGTCAC CTGTACTCCATTTCCATCTGTAGCAATTCCTCTATGCACCTGCAATGATGGTCCTTGTCCGTCGTGCGAACCCCGAGACA TAGAAACACAAGACGAGTCGCCTCGTCATTCGCAAGAAACAGATCAGGACAAAATGGAAGGGACAAGGCTGGGGAAAACA ACTTGTTCAAACATGTTTTGGGGTAGAAGAAGTTGCAGCAGGGAGCACCAGTGCAATTCAGAAATAAATGCCTGACTCAA TAGGAAGGTGTGTGGTCATTCTCATTTTGTGGATACTGTATACAGCTTAATATCCAGCCTCAAATTATGACATCCAGTTG ATGTTATATATATGAAGAAGAAAGCAAGCTTCTATGCAGCTGTTTTGTTGCACAAGCTGCGTGCTAGACGGTAGATGATT TTTATTGGTATAGACAGATTGTTGTTGTAATTGATTGCAATTGGATTTTATTGTCATAGAAAAGGAAGTGTTTTCTCAAG AGGGGCATAGAAAAGTGCCTCTGTTTTAGCTTATGTATCAGATTGAGGTTCTGTACATTGTGTTTGTCATGAATTTGAAA GGTTTATAAAGAACAAATTTTGAGTACTAAAA
CDS sequence (LotjaGi2g1v0146500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAAATTCATTTGGGTGCTCAGCTTCCGGCGAGAGGCTGGTGTCGGCGGCGAGGGACGGCGATTTGGTGGAGGCCAA GATGCTTTTGGAATGCAACCCTGGTCTTGCCAAGTACTCAACCTTTGGTGGCCTCAATTCCCCTCTTCATTTTGCAGCTT CCAAGGGCCATAACGAGATTGTGGCGCTGTTACTTGAGAATGGAGCTGATGTGAATTCAAGAAATTATTGTGGGCAGACG GCTTTGATGCAAGCTTGCAGATATGGTCATTGGGAAGTTGTACAGACCCTTCTGCTCTTTAGATGCAATGTTATGAAAGC AGATTATCTCAGCGGAAGGACAGCTCTTCATTTTGCAGCTGTCAATGGGCATGTAAGATGCATTAGACTTGTTGTGGCTG ACTTTGTTCCAAGTGCGCCTTTTGAAGCTTTACACTCTCGCACGGATCCTAACATGAGCAGACATGAGCATGGTGCCCTG TCCAAGTTTGTAAATAAAACAGCTGATGCTGGTATTACTGCTCTTCATATGGCTGCACTAAATGGGTATTTTGATTGCGT ACAACTCCTACTTGATCTTAATGCAAATGTGTCAGCTGCAACATATCATTATGGAACTTCGATGGATTTAATAGGGGCTG GAAGCACTCCATTGCACTATGCTGCTTGTGGGGGGAATTTGAAATGCTGTCAGATCCTCCTTTCAAGAGGTGCGAGTCGG ATGGCTTTGAATTGCAATGGGTGGCTTTCACTTGATGTTGCTAGGATGTGGGGGCGTCATTGGCTTGAACCGTTGCTGTC ACCCACTTCTGATGTCATAATATCATCATTCCCTGCTTCAAATTATTTGTCCTTGCCTCTCATGAGTGTGCTCAACATAG CCAGAGAGTGTGGATTGCAATCATCTACAACCTCCTCTAATGAGATTGACTTTTGTGCTGTCTGTCTGGAGAGGCCATGT TCTGTGGCTGCAGAAGGATGTGGGCACGAGCTTTGTGTAAGATGTGCGCTCTATCTTTGCTCAACAGCCAATGTTTCTTC AGAAATGCAGGGCCCTCCCGGCTCTATCCCTTGTCCCCTTTGTAGGCATGGAATAATCTCTTTTGTCAAGTTACCAGGTT CCCAAGCAAAAGAAAATAAGTTACATGCGTCTCTCAGCCTGTGCACCCCATGCATACAACATCCACGACGCGACCTAGAT CCACAATCTCATACACCAGAGATTCGAAGAAACCGTGTAGCTTCTGTTTCTTCTGAGATGCTTTGCCCTGTCACCTGTAC TCCATTTCCATCTGTAGCAATTCCTCTATGCACCTGCAATGATGGTCCTTGTCCGTCGTGCGAACCCCGAGACATAGAAA CACAAGACGAGTCGCCTCGTCATTCGCAAGAAACAGATCAGGACAAAATGGAAGGGACAAGGCTGGGGAAAACAACTTGT TCAAACATGTTTTGGGGTAGAAGAAGTTGCAGCAGGGAGCACCAGTGCAATTCAGAAATAAATGCCTGA
Protein sequence (LotjaGi2g1v0146500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGNSFGCSASGERLVSAARDGDLVEAKMLLECNPGLAKYSTFGGLNSPLHFAASKGHNEIVALLLENGADVNSRNYCGQT ALMQACRYGHWEVVQTLLLFRCNVMKADYLSGRTALHFAAVNGHVRCIRLVVADFVPSAPFEALHSRTDPNMSRHEHGAL SKFVNKTADAGITALHMAALNGYFDCVQLLLDLNANVSAATYHYGTSMDLIGAGSTPLHYAACGGNLKCCQILLSRGASR MALNCNGWLSLDVARMWGRHWLEPLLSPTSDVIISSFPASNYLSLPLMSVLNIARECGLQSSTTSSNEIDFCAVCLERPC SVAAEGCGHELCVRCALYLCSTANVSSEMQGPPGSIPCPLCRHGIISFVKLPGSQAKENKLHASLSLCTPCIQHPRRDLD PQSHTPEIRRNRVASVSSEMLCPVTCTPFPSVAIPLCTCNDGPCPSCEPRDIETQDESPRHSQETDQDKMEGTRLGKTTC SNMFWGRRSCSREHQCNSEINA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 502 | 502 | 1.7E-297 | – | |
| PANTHER | 1 | 502 | 502 | 1.7E-297 | – | |
| Gene3D | 7 | 105 | 99 | 2.7E-23 | ||
| ProSiteProfiles | 14 | 254 | 241 | 37.639 | ||
| SUPERFAMILY | 14 | 266 | 253 | 7.95E-50 | ||
| ProSiteProfiles | 44 | 76 | 33 | 14.559 | ||
| SMART | 44 | 73 | 30 | 1.2E-5 | ||
| Pfam | 49 | 132 | 84 | 8.8E-18 | ||
| SMART | 77 | 106 | 30 | 0.43 | ||
| Gene3D | 106 | 211 | 106 | 5.6E-19 | ||
| ProSiteProfiles | 111 | 132 | 22 | 8.923 | ||
| SMART | 111 | 142 | 32 | 3.0 | ||
| PRINTS | 112 | 127 | 16 | 3.3E-5 | ||
| Pfam | 162 | 191 | 30 | 4.5E-5 | – | |
| SMART | 170 | 199 | 30 | 5.6E-5 | ||
| ProSiteProfiles | 170 | 202 | 33 | 11.942 | ||
| PRINTS | 186 | 200 | 15 | 3.3E-5 | ||
| Gene3D | 212 | 269 | 58 | 1.2E-9 | ||
| ProSiteProfiles | 213 | 245 | 33 | 11.114 | ||
| SMART | 213 | 242 | 30 | 2.2E-4 | ||
| Pfam | 214 | 244 | 31 | 1.7E-5 | ||
| Gene3D | 295 | 380 | 86 | 6.0E-7 | ||
| SUPERFAMILY | 311 | 368 | 58 | 7.39E-8 | – | |
| SMART | 312 | 361 | 50 | 0.0077 | ||
| ProSiteProfiles | 312 | 362 | 51 | 9.657 | ||
| ProSitePatterns | 327 | 336 | 10 | - | ||
| MobiDBLite | 450 | 473 | 24 | - | – | |
| MobiDBLite | 450 | 474 | 25 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0146500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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