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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0090400 |
| Transcript ID | LotjaGi3g1v0090400.1 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G36930.1 Disease resistance protein (TIR-NBS-LRR class) family; Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7LF48|G7LF48_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi3g1v0090400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:10231128..10238442) extracted from Lotus japonicus Gifu genome v1.2.
CTTTGCCATTCAAAAAAATACTCACCACAGTCCAGAAAACAAAGGTATCCTTCCTGCTACTCTGCATTTTGCATTTTTGC TGAATCGTTGACTTCAATTCCTTTCTTCGTTTCGTGTCGAATTGGAATCATAATGGCTGCTTCATCCTCGAATCATCAAT GGATCTACGACGTGTTCATAAATTTCAGGGGAAATGACACCCGTGACAGCTTCGTTTCTCATCTCCATGCTGCCCTCTCA AACGCTGGAATCGACGCTTTTTTTGACGATAAGAGTCTTGAAAAGGGAGATGAGCTGAAATCAGTACTGTTGCGAGCAAT AGAAGGGTAGGGTCTCGTATATCTTTAGTGGTTCTCTCCCCAAACTATGTTTCATCGAAATGGTGTCTTGATGAACTCAT CAAAATCATGGAATGCCGCAGAACATATGGCCAACTGGTTATTCCTATATTTTACCATGTTGAGCCGTCGGACGTGCGTT ATCAGAAGGGTCCTTTTGCTTTGGAAGTAAATTCAAGAAGAAGAGGACGCCGAAGGGAAAACCTGGTGGGGTGGAGGACC GCGCTCCACGAAATTGCAAATTTGTCTGGTTACGATTTGAGCACCGACAGGTAAATCAATACTCTTTCTACTTTCTTGAA AAAAAGAGAGATGCTAATTCTGTCATTCTGTTTTGTATTTATCATTTGTTCATTATTATTGAAGGAGTGAAGCTGAAGCA ATCAATAACATTGTTAAGAATGTTTTCGGGAAATTATACATCAGAGTGATGTCCATTACCAATTTTCCGGTTGGATTAGT ATCCCGCTTGCAAGAAGTGATTAAGTTGATTGAAAGCCAACCGAGCAAAGTTTGTATGGTAGGGATTTGGGGAATGGGAG GGTTGGGTAAAACAACCACAGCCAAAGCCATCTTCAATCAAATTCATCGCCAATTCATGTGTGCAAGTTTCATTGGAAAC ATTAGAGAAGCTTATGAGGATAGAAGAGGGCCTATTGATTTACAAGAACAACTTCTTTCTGATATCCTAGAAACTAAGGA GAAGATACATAGCATTGAAAGAGGGACAGCTATGATTAAGAAAATTCTTTCTGGGAAAAGGGCTCTGGTTATACTTGATG ATGTGACCACATCTGAGCAATTGAAAGCCTTGTGTGGAAATCGTGAATGGTTTGCATCAGGAAGTGTAATAATTGTTACA ACCAGAGATGTGCGGTTACTTAGTTCACTTAAAGCTGACTATGTGTACAAAATGAATGAGATGAATAAAGATGAGTCGCT TGAGCTTTTCAGTTGGCATGCTTTTGGCGAAGCAAGTCCAGAACAAGACTTCACTGAACTCTCAAGAAGCGTAGTTGCTT ACTGTGGAGGGTTACCTCTAGCTCTTGAAGTCCTTGGATCTTACTTAAATGAGAGGGAGAAAAAAGAATGGAAAAGTGTA TTGTCAAAACTAGACAGAATTCCCAATGATCAAGTGCAACAGAAACTCAGAATAAGTTACGATGGTTTAAAGGATGAGCT GGAAAAGAATATATTTCTTGACATATGTTGTTTCTTTATCGGTAAAGACAGAGCCTATGTTACAGAAATATTAAATGGCT GTGGATTTTATGCTGATATTGGAATAACAAGACTCATAGAGATGAGCCTCCTAAAAGTTGAAAGGAATAACAAGCTTGGA ATGCATGATCTTGTTCGAGATATGGGAAGAGAAATTGTTCGTGAAACTTCAACACAAGATCCCGGGAAGCGCAATCGGTT GTGGTTTCACGAGGATGCACATGATGTTTTGACCAAAAATACGGTAAGAATACATACATATATATATTTTTTGAATAGCA CTGGCAAATCAAAAGCTAACAAGATTGCAGAATACTCAGTAGAAAATGCAGAACTGGAACAATTTCTGAATATGAAAGCT TGATTGAAGAAGAATCCTGAGGAAGAAGAAGATAACAGAAACAGAGAAGCTCAACTGAATCCCAATTCAGTTGAAGCTCT CTAACTACCTAACTGAATCAACAACCCAACAATATGCAAAAGCTAACTAACTATGAACCATGGGTTCCTATTTATAGTCT CTCTAACCACAAGGTTTATTAAGCACTAATCTAATTATTAAGCACTCAGCTAATTCCCCTTATTGCGTCTGACATAGACT TTACTGATAAGAGGCTTCTGCATCCTCTTGACCCTATCAGAATACATATTGAAACTTTTGAGTTTTCAATATCCCCCACA ATCTTTTCAGGATCATAAAACACTTTGTTTTGCTCTGCTGGAGGTTTATGTATAGAAAATAAAAACTGTTTTCCTTACTT TTTCTCTGTATTTATATTCTTCACATATAGGGAACAGAAACTGTTGAGGGATTGGTTTTGAATAAGTATTAGGTTGCACC ACTGCAACTTTATGTTACATTTTCATGTGAGCAAATGAAAAGGGCTGCCCCCCTTACTTTTCTCAGTTTTTTTTTGTCAC ATATAGGGAACAGAAACTGTTGAGGGATTGGTTTTGAAGATGCAAAGAACAGAAAGAGGTTGCTTCAATGCTAATGCTTT CAAGGAGATGAAGAAGTTGAGACTTTTGCAACTTGATAGTGTTGACCTCACTGGAGACTACCAGCATCTGTCCCATGAAC TGAGATGGGTCCATTGGAAAGGATTTACTTCCACATTTATACCCGATCACTTTTATCTGGGAAATCTAGTTGTTTTAGAA TTAAAGTACAGCAGCATTAAACAAGTTTGGAAGGAAACCAAGGTATAGAACTCAAAGGTTGATGACTATAGGTGGACACC ACTATTTTTCCATATTCTCCAAATTTTTCTTATAAACATTTATCTTCTTGCAGTTGCTGAAGAAGCTAACCAAGGTATAG AACTCAAAGGTTGATGACTATAGGTGGACACCACTATTTTTCCATATTCTCCAAATTTTTCTTATAAACATTTATCTTCT TGCAGTTGCTGAAGAAGCTAAAAGTTCTCAATCTCAGTCATTCAAAGGACTTGGTAAACACCCCTGATTTTTCAAAACTA CCGAATCTAGAAGAGCTCATTCTAAAGGATTGTCCAAGTTTGTTCGAGCTACACCCTTCCATCGCATATCTCAGTAATCT TCTTCTAATAAATTTGGAGGGCTGTACAAGCCTTACCAATCTCCCAGGGAAGACCTATCAGTTAAAGTCAGTTAAAACTC TCATCCTTTCGGGTTGTTCAAAAATTGACAAGTTGGAAGAAGATATAGTGCAGATGGAATCCTTGACAACACTTATTGCA AAAGATACAGCTATAAAGGAAGTGCCTCATTCAATATTAAGATTGGAAAGCATAGCATATATATCCCTATGTGGATATGA AGGATTAACACGCGATGTTTTTCCTTCTCTCATTCGATCTTGGATTTCACCAACAATGAATCCCCTATCCCGTATTCCCC TATTTCCGGGCATGTCATTGTCTCAAGTTTCTATGGATATACAGAATTATAGATCAGGCATTTTATCTTCATGGCTTAGC AGCCTATCAAAACTTAGAAGTGTTTGGATACAATGTCACTCGGAGATCCAACTAACCCAAGAGTCAAGAAGAATTCTTGA TGATCAATATGATGTAAATTCTATGGACTTGGAAGCATCATCATCATATGCATCACAAATCTCAGATTTTTCCTTGAAAT CACTTTTGATAAGATTGGGAAGTTGCCACACAGTCATTGAGACTCTTGCCAGCAGCATACCACAGGTGTCTTCTCTACCT TCTCAGCTGTTACTGATCTTTATTATTAATTAGGGAATTATTTTCTGTTTGCATTTGTTTGCTTAAAGCTGAAAGTTTCC ATATGATACGAACTTATTCAAGTATCTGCGCAATAAACTAATTTAAGTTTGATCATAAGGTCACGTCTGTCACATAGAAG TGGACCAATGTTGTTTCAATAATTGCATTTTGTTTTTTTGTCTACACTGAATCACTAAAAAAATGTATTTTTAGTGGCAT TGATACTGTTAAATTGTGGCACCACAAGTGTTGTTCTCGGCATTTATCTTAAATGCCACTACCACGGATGCCACAACTGG TTTGGTGGCTGTTTTTGCTTAAATGCCGTTTTTTATGCCACAAATTGCTTCAGTAATTACTGGCAGCTTTTAAATGGCAT GAAAAGGCCACAAATTGCACCAACCATTGTATTAACCTCAAATTTTACTGATACGTTGTAAATGCCACAAAGTACTAGAA ACATGTAACATAGTGAGGATCAACTATCTCATATTATACGAAAAGAACAAGATAATATGCCTATAGATTGACATGTAGTA TATATAACACTCCTGTTTGCCTCTAGATCTACTTTAAACATGTCACCACTTGATTATTGAACTTATTAAACATAACAAAC ACTAAATTTCAGTTATGGTAAATTTATGTGTATGGTATAATGGTAGTAGTTATATCCATTCTCAAAATTAACTCTAAGGA AGGTGATGATTCACATTCTCAACAGTCTTTTGTTGGCAAGAAAGGAATGACTTGTATCCATTCCACAATTTGAGAAGGAG TGTTGGAAGTCAATCTTTAGAACATTATGAGAATTATATATTCAGTTATAGGGATTGTGGTAATCTTTTTCATTCGGTAA GAGTTTTGCTGCCATTATTGATGCATGGAATAGGTTCTAACTTTCTATTGTTAATGATTGCGTTACAAAATTATTAGTTA ACTTTTCTTTGTTTTTCTTCATGCAACATATTATCATTATATTTAACATTCACCTTTTGAAATTAAGAATGACACATTAC ATGGCATGGAGAGTCCATTTGAATGATTAAATAACCGAATGTATATATGTTCTTGATACAGGGATCGACAACCAACGCTT CTAGTAATTTTGTCCTTCCGGGTGGTGATGATCCTTCTTGGTTAGCCTATAAAGGTGAAGGACCTTCTGTACATTTTCAA GTTCCAGAGGATCGTGATTGTTGCTTGAAGGGAATAGTTTTATGTGTTGTTTATTCATCAACACCTGAAAGTATGGCAAC TGAATGTCTTACAAGTGTCATGATAAATAATCACACAAAATTCACCATTCAAATCTACAAGAAAGATACTGTAATGTCCT TTAATGATGAAGATTGGGAGAGTGTAAAATCAAATCTTGATCCTGGTGACAATATGGAGATTATTGTTTCTTTTGGGCGT GGATTGACTGTTAAGGGAACGGCTGTGTATCTAATTTATGCTCAGTCAATCATTATGGAAATTCAGCCATCAATTACTGT GGAAGTTGAATTTGAGCCATCTGTTAATGGGAAAATGGAGCCATCATCTGAAGTGAACATACATCCATCGCCTAACTTGA AAATGGAGCCATCACCAAAGCCAACTAAAACTATCTTTACAAGACTTGTAAAGAGAATTGGAAAATGTTCATGCTTGAAC CAGAATTGAGATTTCTACAATTTCTGATCGGGCAAGGTGTTGTCATAATATAGGATTCCCTTGTTTTATGTGTTTTGCAA TATTTTCTAGGAGGGAGGAGGGACAGCACCATGTTTTATGAACATAGAGGAGAAATGGATAATTCATGTGGTTGATGTGC GTTTAAATGAATACAGTTCTGAAAATGTTAAGAGTTCATTTCTTGTTTTTCTGGCCCTCAAGATTTCTGGACTAGATGCT ATGTAACAGCTAGATAAAAGATGGTATAAATGTGCAAGTCTAGAGAAGGTTGCTGGGTATTATTAGTATAAAGCAGTTTT ATGTGTGGAGTGGGGAAGTTTGAAGTATTAGATTCAGAGGGAATCATGTGAATAATAATGTATACACACTACAGGAGGTT ATTGTTCCTTCAAAATTTTATGAAATGGAAGATTGTGCAGTCAATTCCATTACTCTATTAAATTCACTGCCTAGGTTGTG CTGATGTGAGTTTTATATTATCTCTATTACCATTTTTATGTCTGTATTACTGTGATCATGCTTCATTCAATATCAGATGG TAATTAGTAGTGATAAATGTTTCTTTAATTCATGCAAATGCAGCTTAGTGCTCAAAAGATAGAACACTCTGCAGATAGGG ATCAACCTACAACTCATCCGAGATAGGAAGGAAGGCCGCAAATTTATCTATCTTATAAAGCAAAGTTTAGCCTGTAAGAC TTTAAATAATCAAATTGCAATCATCCCTAACTTGCCTTTTAATATTATATTGTCGTTTGAAATTCATTTCTAGGAGAAGC TTTTATGAACATACATATAGTCTCTGTCAAGAAGACATCTATCTATATTTTATATAGGGTGAATCAATTGATGTGAGAAA CCATGATTCCTCAAAGCAGAAGCCTGAAGAAAATGCTTTTATAAAGCTAAGGCAGGAAACAACAATGTGCATTATGAATA TAGATGGTTATAGGTTAGGTTGGTGGCTTATGACGTAGTTTATGATAGCAATTCCGCAAGTGTACGGATTGATCGAAATA ATACAAAAGATTGCCGAACCACAGGGATAGTTGTTGATTAATTTATTCTAAGAGTTTAGTGTTCAGAATATGAAAAAGAA AACAATATAAGTTCTTCTTTGATTCTGCAAACTAAGTTCTCTACCCATCAAACTTATAATTTGTCTTTACTTTTCCTTGT TCTAAACAACTCTTGCTGTTGTGAATTGGTGCTTCCCCAATCCCTGTGGTTCGACAATTCTTTTATATTACTTTGAGCGT ACCGTATACTTGCGGATAGCGTATCACATATGATCTTTAAGGGAACTTAAAATTTAAAAACTCCTTCCTCTCACTTATCT CCTTATTTCTGATATAAGGAGTTTCCTGTGAACGCAGGAAGTATATTCAATTTCTTTTGTCCTTAGATGTGTTTATCTTT GACATTTGAAAAAGCTTTTACTAGTTCAAAAATATTCCCCCATGGATGCTGCATGTTTATCAACGAAGACACTTGAACTT TACAAGAGCATAAGCCATACATGTTACAGGTTGATCTGTGTCTTATCTATCTGTTTGCACATGCTCAGTTGTTTTGTGTG CTGTGTGGTGCCTATAATCACACTCAATTAACACTACATGATCAACGTGCACCCCAATCCAATTTTGAGTTTGAGTTTTC TTAGATTTTTCATTCACAGATCATGCACTAGTCTGACCATTTTGCTTATTTAACTAGCTTTGTTGCAACTCTTAATTTAT TTGTATATATGCAGAAACAAGTAGTATTGGTGGAGAGAAGGAGTGGTACTAGTATTGGGGGTTTGGGTTCATAGATTACG GATGATGGGATGAATACGAGCTACTGAGGAGTAAA
CDS sequence (LotjaGi3g1v0090400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAATGCCGCAGAACATATGGCCAACTGGTTATTCCTATATTTTACCATGTTGAGCCGTCGGACGTGCGTTATCAGAA GGGTCCTTTTGCTTTGGAAGTAAATTCAAGAAGAAGAGGACGCCGAAGGGAAAACCTGGTGGGGTGGAGGACCGCGCTCC ACGAAATTGCAAATTTGTCTGGTTACGATTTGAGCACCGACAGGAGTGAAGCTGAAGCAATCAATAACATTGTTAAGAAT GTTTTCGGGAAATTATACATCAGAGTGATGTCCATTACCAATTTTCCGGTTGGATTAGTATCCCGCTTGCAAGAAGTGAT TAAGTTGATTGAAAGCCAACCGAGCAAAGTTTGTATGGTAGGGATTTGGGGAATGGGAGGGTTGGGTAAAACAACCACAG CCAAAGCCATCTTCAATCAAATTCATCGCCAATTCATGTGTGCAAGTTTCATTGGAAACATTAGAGAAGCTTATGAGGAT AGAAGAGGGCCTATTGATTTACAAGAACAACTTCTTTCTGATATCCTAGAAACTAAGGAGAAGATACATAGCATTGAAAG AGGGACAGCTATGATTAAGAAAATTCTTTCTGGGAAAAGGGCTCTGGTTATACTTGATGATGTGACCACATCTGAGCAAT TGAAAGCCTTGTGTGGAAATCGTGAATGGTTTGCATCAGGAAGTGTAATAATTGTTACAACCAGAGATGTGCGGTTACTT AGTTCACTTAAAGCTGACTATGTGTACAAAATGAATGAGATGAATAAAGATGAGTCGCTTGAGCTTTTCAGTTGGCATGC TTTTGGCGAAGCAAGTCCAGAACAAGACTTCACTGAACTCTCAAGAAGCGTAGTTGCTTACTGTGGAGGGTTACCTCTAG CTCTTGAAGTCCTTGGATCTTACTTAAATGAGAGGGAGAAAAAAGAATGGAAAAGTGTATTGTCAAAACTAGACAGAATT CCCAATGATCAAGTGCAACAGAAACTCAGAATAAGTTACGATGGTTTAAAGGATGAGCTGGAAAAGAATATATTTCTTGA CATATGTTGTTTCTTTATCGGTAAAGACAGAGCCTATGTTACAGAAATATTAAATGGCTGTGGATTTTATGCTGATATTG GAATAACAAGACTCATAGAGATGAGCCTCCTAAAAGTTGAAAGGAATAACAAGCTTGGAATGCATGATCTTGTTCGAGAT ATGGGAAGAGAAATTGTTCGTGAAACTTCAACACAAGATCCCGGGAAGCGCAATCGGTTGTGGTTTCACGAGGATGCACA TGATGTTTTGACCAAAAATACGGGAACAGAAACTGTTGAGGGATTGGTTTTGAAGATGCAAAGAACAGAAAGAGGTTGCT TCAATGCTAATGCTTTCAAGGAGATGAAGAAGTTGAGACTTTTGCAACTTGATAGTGTTGACCTCACTGGAGACTACCAG CATCTGTCCCATGAACTGAGATGGGTCCATTGGAAAGGATTTACTTCCACATTTATACCCGATCACTTTTATCTGGGAAA TCTAGTTGTTTTAGAATTAAAGTACAGCAGCATTAAACAAGTTTGGAAGGAAACCAAGGTATAG
Protein sequence (LotjaGi3g1v0090400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MECRRTYGQLVIPIFYHVEPSDVRYQKGPFALEVNSRRRGRRRENLVGWRTALHEIANLSGYDLSTDRSEAEAINNIVKN VFGKLYIRVMSITNFPVGLVSRLQEVIKLIESQPSKVCMVGIWGMGGLGKTTTAKAIFNQIHRQFMCASFIGNIREAYED RRGPIDLQEQLLSDILETKEKIHSIERGTAMIKKILSGKRALVILDDVTTSEQLKALCGNREWFASGSVIIVTTRDVRLL SSLKADYVYKMNEMNKDESLELFSWHAFGEASPEQDFTELSRSVVAYCGGLPLALEVLGSYLNEREKKEWKSVLSKLDRI PNDQVQQKLRISYDGLKDELEKNIFLDICCFFIGKDRAYVTEILNGCGFYADIGITRLIEMSLLKVERNNKLGMHDLVRD MGREIVRETSTQDPGKRNRLWFHEDAHDVLTKNTGTETVEGLVLKMQRTERGCFNANAFKEMKKLRLLQLDSVDLTGDYQ HLSHELRWVHWKGFTSTFIPDHFYLGNLVVLELKYSSIKQVWKETKV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 1 | 88 | 88 | 3.0E-9 | ||
| Gene3D | 1 | 89 | 89 | 2.0E-22 | ||
| PANTHER | 1 | 526 | 526 | 1.0E-269 | – | |
| PANTHER | 1 | 526 | 526 | 1.0E-269 | – | |
| SUPERFAMILY | 2 | 62 | 61 | 1.23E-6 | ||
| Gene3D | 90 | 249 | 160 | 1.7E-29 | – | |
| SUPERFAMILY | 90 | 348 | 259 | 2.25E-62 | ||
| Pfam | 108 | 329 | 222 | 1.3E-33 | ||
| PRINTS | 119 | 134 | 16 | 2.7E-21 | – | |
| PRINTS | 195 | 209 | 15 | 2.7E-21 | – | |
| Gene3D | 253 | 337 | 85 | 2.3E-10 | – | |
| PRINTS | 288 | 302 | 15 | 2.7E-21 | – | |
| SUPERFAMILY | 324 | 430 | 107 | 2.99E-11 | ||
| PRINTS | 503 | 519 | 17 | 2.7E-21 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. | ||
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi3g1v0090400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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