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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0101300 |
| Transcript ID | LotjaGi3g1v0101300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serrate RNA effector molecule-like protein; TAIR: AT2G27100.1 C2H2 zinc-finger protein SERRATE (SE); Swiss-Prot: sp|Q9ZVD0|SRRT_ARATH Serrate RNA effector molecule; TrEMBL-Plants: tr|K7KJV0|K7KJV0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0101300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:12547240..12556731) extracted from Lotus japonicus Gifu genome v1.2.
TTGTTTTTCAGTTTCAAAATTAAAAAATAAAAAATACATGCTTCATGCTCGTGTAAAAATGGATTTCTCATTGAATTAAA TACAACTATATAGAGAGAAAATGCATGCACACAATTTTAATGTGACTAGATAAGAGAAGAGGACACACCCGAATCACTTT TTCTTCTTCATTCATCCTCTTCTTCAGTTATTAGGGTTTCTGCACTTTCTCCCCTTCACTCCCATTTTTCCAATTCTACC CTTCTCCACTTCCCATGGCGGAGGTAATCAACTTGCCACCCGAATCTCTCGATCGATCTCCCTCCGCTTCCGCTCCTCCG CCGCCACCGGCGGCTCCACCTGCTCCTATTCCTCCTACCTCATCCTCCGCTGCCGATGACGATCTCCCGCCGCCTCCTCC CCCTCGCCGGAGGGACCGCCGTGACGACCGTGATTTCGACCGCCCCCGCGGCGGCCGGGATTACTACGACCGTGATAGGG ACTTCAAGCGCCGCCGCAGCCCTAGCCCTGGCTACCGCGATCGCCGCCATTCCCCTCCCCGACGTTCACCGCCTCCGTAT AAGCGATCTAGAAGGGGCAGCCCCCGCGGTTATGGACCCGATGACAGGTGATCATGCTAAACTTCGCTGATTCATAACGA TTAGGGCACTGATTTAAAAACCATTTCGTAACTTCAACTTGTGTGTTTATGATCTATGGTAGAGTCATTTCCATGTATAT ATCTTGTTTATCTGGTTAGGGAAACTTGTATTAATTCAATTCTGAACAAGTGTTGTGTTCAGTTCAGTTTTTTTGTTTGT TGGGATTGTAGGATGCAGTGGTTTTTTTACCTCACTCTCTGATACACTGATTGTAAGTAAATTACTAGTGATATCATGCC CCGGAACTCGATAGAAAGCATTTTATAAGTACAATTTTATTATGAAACTTGACCTTCTTTTTAGTGATTCAAAGTATAGG GCACTTGATATGGAGATCCTTGTGTGCTGATGATGTATAAATAGGTCATGTATATATCTTATTTATTTTTCTATAAGCGC CCTCGAATCCTCGATATCAAGACCCTTGTGTTTAAATAATTTGCCCACTTTCATGCGATCGTGGATACACATTAGAAGGA TTTTGTTCTTGATGTTTGTTCTAATATGAATTTCGTTTTAGAGTGTCCGTTTAATATGTTTGTGTTTCCTCTCACATTTG TATGTTGTTTCGTCATATCTTATTACCAATGGTTGTTCATCATGTATTATGCTAATATTTTTTCCATTAATTTTCTTTAT TATCTGAGTAAATCAGGTTTGGACATAATTACTCTGGTGGCTATGAACGGGGAGTGGGTGGAAGGACTGGTTACGCAAAT GAAAGGTCGTATGGCAGGTTTGGACATCGATCTGCTGGGGGATTTCAAAATGGAAATTCTGGTAGGTAATTGTTGCTTAG TAATAGGTTTTTTTGTACATAATGTAAATGCCATTTATCGACAGCTTTAGTTCTAGTTTATTCTTTTAAGTGAACTAATT TAAACAGATCACAACCACTTTTGAATACTAATTATGTAGACATAATAACCTATGGGTTTCTTTTCACGCTCTTCTATTTC ATGGTTTCTGCATTGAAATTTGCATGTTGTTAATTGTGATGAATGTTAAATTGGTAATGTTATTGCTCAGTGCAACCTGT CTAACTTGTCTGAATAGTCCTGTTATTTTTATTATATAGAATGATATAAACTGCGCAGAAACTAATTAGGGATTTATTCC CATTTATGTACAAAAGTTGCTCTCTCCCTATATTTTCTTTATAGAGCCACTATATCCGCTATTTGTGGTCCAAAACATCT GTTTGTTTTTTTGTTGGGGGGGGGGGCAGATCCAACAACTCATGAATTTTACAACCCCTTTGAGCCCTATTCTGTTGTGT TCTCTTACATGTGTTGCCATTATCCCTTTGTTCTGCTCCTTCTTGGTAGCTTCAAACAGTTGAGTAGTGGTTTGACGTAT AGGTTGCTTGGTTTGATGTTGGCTAGGTTGTTTGAACTTTGATGTACTTCTATGCATAGTTATCAGTATCTTACGATACT GCAATATGTATCTTGATATGATACAAATTCTTGAGGCAGCGATATGTATCTCAGTTCTTAAAATGAGCCTGAATCCCATT TTGTATCTCCGAGTCAAGCTTAATCTTGAGATTCACGATTCGTTATTGAATCTTATGATTCAAAGTTGCGTGCAAGTTAC ACATCAGTCGGGTCAGGTTGCGTGACCTGTACAGGTTTCTGATGCTTTTTGGGAAAATTTCTTGAAGTTTTTTAAAAAAA AAAAGCAGATATAGCTCACTAGTATTCCTCCAAAAAAGCCCATGCGCATTGTCAGAAAAATAAACCCTACTTTGGTTGTC ATTAGTATGATTCATGTGGCATTTCGGGCTCACTAATGAAACGTGTCTCCTTTGTTGTTTTTTTATCGGTTCCGGTCCCC CTGTGCTTCTCGTCACTTATCTTCATCTCCTGCTGTGATATTTGTTTACTGCTGCACTGCAATTTTTGGAGGGGTTGAAT ACTTAAACTTTGTGCAAGAACCCACCATTTTTCTTCTTATTTTGATATATGATTTGGATCTTGTATTATTTTAAGGTTTA TTATATGATATATCAGCTTATGTTTCAATTTATTAATTGTGTTTTTGTATCATGTATCTAACTATACATAAAAAGATTCG ATTCACGATTCGGAAAATAGGGCTTCCAATTCATGATTCAAATCTTGATTCAATAACCATGCTTCTGGGTGGTAATTGGT TCATTTGGGTGTGGGTTGTGGTTCATGTTGTCTGGGTTGTTTGTATCATGTGTGTGCTGTTTTGACCCGTTCCCTTTTTG TCTGTTCTTGCTGCTACTTGGTGGTGATTTGTGTGGGCTCAAAGCACTGCTTTGTTTTACTCGGTGGTTCTCTGTTTTCC TGCCTCTTGTTCTACTTGGTGGCTTCAAACACTGATCTATATAAGTACATACGTTCATTAGCCATGATCCATGATACATA TTTTATTTAATAGATGTCATTGTGTTATCATAGCTAAGGAAGGCATTGTAGTTGTGTATAATTATATATTATATATTATG TAATCTTAGGTAGGATCTGGATTTTGACTACCTTCGATGTTGCAGTTACTCTAATTAGGGTTGCTACATGTCCTATTAAC ACAAACAATTAGACAGTTTTGTAATTTTAATTTAATTATGATGTGTTATAATGGTGAAATCTAACACGGAGTTTACGTAA AGCTTATTTAAACTGGCACTGCATAGTCATGAACCACTATTTTTATATTTTGCTTGAAGTATAATATTATAGCGATCAAT TAATTGGAGAAGGTTTGTCACAGAGCAACTAATAGGAACTGTCAAGAGTGTCCACATTTTGCTTTTCTAGATAAGGTCAA CTAACTGTTAATATATTCTTATGTTATGAGTTCATTTTGCAGATGTGGATATGAATCGTGGTTATTCAGATTTGCCAAGT GGAGGTGCACAAAGGTCAGCTTCCTACTTATTCATTTAATTCTTGTTAATCTTTTAATTTAAAACCATGAATGGCCTAAT ATCACGGCTCTTGGCCATAAAGACAAATTTCCCATTGGGAAGATAGTTGAGAAAGGAGCTATGGTGAGCATGCCAATATA CTTTTAAAACATTGAAGGATCTGAAACATGAGATCTATAGGTGCTGTTAAGTGGGCGGTTTCAATTGAAGATGCACCTTG TTACAGTGATTGTACAAGGCCAACTCCTGATCTTCTCAACTATTTGTTAATTCCATTTTGGAGATGAGATTAATGATTAT GGATGTTCTTATATCAACACCCCAATTTTCCATTAGTGATAAATGGGCATATGAAATTCAGATAGAAATACAGTCTGTGA TGAACAAAGTACTGGATCAAAATCTTGTGCAAGTACAAGTGGCTTTCAAATAGAAGATAGCATTTTTCAAAGGAAATTTA GAGAAGAAGCCAGTCTGTCATCGCAAGTAAATTTGTGGAAAGTACCAGAGGACACTTGTTGTCTAAGAACACTAAGGGTC TGTTTGAGAGAAGTGGGAAAGAGGGGGAAAGACTACAAAATGTAGTATGCTTTCTCCCCCCTTTCTCACTTTCCCACTTC TTTCAAACAGGCCCCGAGTCTTCTTTGCTGGATGGAGCTTTATAGCATTGGTTATTTACGTTGTGGAAAGATGGGTTTCC GCAGGACTGCTCTTTGAATTTCTATTTTGAGCTTATAAACAAAACTATATTTGATTGTGCAAATAGTCTGGACAAGATAC TAGTGAAAATGGAAGTATTGCGAGTGAAAATGTCAACAAAAGTATCCATGAGAAAACAATTTGCATTCATGAATGAGTAT TCTGTGTGTGAGGTTTGAAATGACTAGACTGCATTTATTGATTATATTTTCTGTAAGTTTTCATTTTTTAATTTATCAAA GAAGCTCCATTGTAGAGTCTTGAAAGGTTATTGTAGTACAAACTTAACTTTCACATTACCTTCGAACTACTGTTGTATAC CATATGCGGTATTTTTTCCTGTTAAAATCTGCCAGAGCTTTAAGATTGAAAATATGATTATGGTATGATATCTACCAAAG TTTATACCATAGTTGAAATTGACCCAATGTCAAATTTATTCTTTCTTTATCTCTAGCTTGCTCACTCTACTTTTTCTATT TCATCCTTTTGGTTTAAATTTCTGCGCTTGAGTCTCTCTGTTGATTCGTTTGCTGACTTTGCTTGGTTTTATTTGCTATC TCTGTTTCGATCTGTCTCATGCTTATTTTAATCTTTTGTCTCTTCTGCTTTTCCCCCATAACTCTAACGACCTCCCTTGA CCACGAAAAAAGAAACTTTCCCCTATGCATCTTTATTTTCTTGTTACTATGATCTTTCTGTTCTTCGCTTTTGTTTGTAT CTGACTGACCACTATTAAACATAAAATAGTTGTTGACATATTAATAGTTCAGTAACTATGAAATAATCATCTAAGTTATT TACTTGAGTTTTAATGATACTTTACAAGTAGTAGTTAATTATAATATCACTTTTTATATTAAATATATTTATATAATTTT TGGAAGATCTTTTGATCTGTTTTACGATTCTAAGTGTATTAAATATATTTAATTATAATATCACTTTTGATCTGTTTACT ATTTAATATCACTTGGTTGTTTAAAAGACTTGGATTTTGTCCTTTTCTTGAACTTAAGTGAGGAATCCTACAGGAGAGAA GTTCTGCTACAAATGTAGTATTCCTAAATTCAAAATCCTGTTAGCAGTTAATATTCATTTTAAGCATTACCTAATTTTCT AGACAAACTGAGTTGAAACTTTGTAACAAATGGTATTTGTTTTTACATAATTCCTTTTCCTTGTCACTTGAAATCTATGG GTAAACCTCATGTCAAATTGAAGGTCTGTCCTGCATGCTGTCACAGAGTTTGGTACACATGCATGATATACTCTTTTCAG CATGCAATTGTATATTGTTCCTGTTCTGATAACTTCTGTTATATTTCATACCAAAGTGTGGCTTCCATTTTCAGTTTTAT CAATAAATAGAAAAAGTAAGTATTAGATTTATCGTTTGAAGTACCTCTTTTCGTTCCTTTTTCGGGTTGTTATGGAGGTT TCACTTTTAATATGTTGATTGTCATTGCTGATTCATGGAATGTGGGTTGCCTTTATTTTACCCTATTGACTGTTTGATCT TTTTGGGGTCGTCTGTTAAGTGTTAACTTGAAAGATGCTTGTAAAATTTTCCAGAGAGGGGTTGATGTCCTATAAGCAAT TCATTCAGGAGCTTGAAGATGATGTACTGCCTGCTGAAGCTGAGCGTAGGCAAGTTTTAGAAAATATTGTTTGCATTGTG CCTAAGCTCTAAGTACTGAATAATTTGTGGGATACTTGCTGACAAATGATATGTAATCTACTTTTCTAGGTATCAAGAGT ACAAATCAGAGTATATTTCTACTCAAAAACGAGCTTATTTTAATGCTCATAAGGATGAGGAGTGGTAAGGGATTTTTTTC CACTGCGAAAATTTCATTTGATTCTCGAAAATATGTAATGTTCACTTTATATAGTTTGAATTACCATATCGTTTTAAGTA CAAAAAGTCTCGTGTTCCCTTATTTGATTTCAATTTATATGTAGGTTGAAAGACAAGTATCATCCAACAAATTTACTTAC AGTGATTGAAAGGTGAGTTTATGCAGAACTTTTGTTCAATGAAGAGCCGAACATACCATCCTCTTCATATTGATGGGTGG AATACTAGTATTTTTCTTGTATACTTTCTTTATAATATATTACTATTATGATGAAGGTATCTTAACCAATCATATCTGAC ACTTATCTTTTAGGAGGAATGAAAATGCACGACGAGTGGCAAAGGATTTTTTGCTTGATTTGCAAAGTGGAACATTAGAC CTGTATGTTCTTGTCCTCCCTCACTATGTCTGCCTGCTCTTCCCCCTCATGCTTTTAGTATTCTTTGAATGATAAGAATA CTTTGATCAATGCAGGAATTCTGGGTTAAACTCTTCTCCACCCAATAAATCAGGGCAGGCCAGCGAGGGAAATTCAGAGG AGGAAACAGATGCTAGTGGTAAACGAAGAAGACATGGTAGGGGATCCAATAACGATAATGATTTCTCAGCTGCTCCAAAG GCTCACCCTATTAGTTCTGAGGCTAGACGCATCCAAGCAGATATTCAACAGGCTCAGGCTGTTGTTCGTAAGCTTGACAT CGAAAAGGGGATTGAAGACAATATTTTATACACCAGTGATCAAAGTAAAAATGATGATAAGGCTCACAGTGGGTCTGTGG GCCCCATAGTAATTATCCGGGGCCTAGCATCTGTTAAGGGCTTGGAGGGTGTTGAGCTACTGGACACTCTTATTACATAT CTTTGGCGGATTCATGGTATTGATTATTATGGAATGGTGGAGACTAATGAGGCTAAAGGTTTTAGGCATGTGAGACCAGA TGGAACCGGGCACGAAGAAGCAAGTAAATCAGGGCCAGAATGGGAGAAAAAACTTGATTCATTTTGGCAGGGAAGGTTGA ATGGTCAGGATCCCTTGGATGTAATGACTGCTAAGGAAAAGATAGATGCTGCAGCGACCGATTTTTTGGATCCACATGTT AGAAAAATAAGAGATGAAAAGTATGGATGGAAGTATGGTTGCGGAGCTAAGGGCTGCACAAAACTTTTTCATGCATCTGA GTTTGTGCATAAACATCTGAAGCTAAAACATCCAGAGCTTTTGATGGAACTAACGGCAAAATTGCGGGAAGATCTTTATT TTCAAAATTACATGAAGTAAGTATCAAATTGATACTATCAATTGAGGCTTCTTTTATTTGGTGTTTAATTTTGCAAGTTT TGGTGGAAATATCACTCACAGTGGCCTTACTATCATTGTAGTGATTCTAATGCACCTGGTGGAACACCTATCATGCAGCA ACCTCAGGTAAACTAGTGATTTTATTTACTACTATACGAGCTATTATTTTTTATTTGATAAAACTCATCTTTTGAAACTA TATAACCTATTCTGCAAGTGGTTGCTGCATGTTTTGAAAACATTTTGGTGTCTTATGCATCCCTAATATGGCATTTTAGC AACCATTGCCAGATGGGATCAGCACAGTTAGTGATGCACATGTGTTTCCATAATAGAGTCGGTTAGGGGCTGTCCTAGTT AGTTACCCTTGTGTCTATATAAACAAGGTTAATGCTAAATGATATTAATATTACTCTCTTTCTCTTATTTCTTTTTTCTT TCTGTTCCTTTACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGCTCTTTCTATTTCTGAACCTATCAGTTAGTGTTTAG CAATTTCTTTAATTTCTCTAAATGTATGTTGCTGTCCATGGTCCAAGCAATTTATGCGTCAACCTTCAGGAATTGTTTGA TTTTCAAGTGCTCATTATTGATCTTCTCTCCCTCCCCCCCCCCCCCTTTTCTGTAGAAGGACAGGACTCTAAAGCGTAGA TTGCTTGATGCCCGATTGAAAGATGATAGGGGTAGTCGACGAGACATGGATAAGAGTGATAGAATAAATGGAGATAGGCC TGACAATTCTCCATCCCGGGAAAGGCAACGGGGAAACCATGATGAAGGCGAAGCAATGTATGATTCATATGGAGGGCCTG CTGTACCTCCATTTACCTCAGATATGCCCCCTCCTCCACCAGTTTTGATGCCTGTACCTGGTGCTGGGTTGGTTGCCGTT CCTATTTTTCTCGTAAATCTATCAAGTTAGTTGCTTTATTGATATTTCGTTGGTGCTTATAATTTGGAACTTTACAGGCC TTTGGGACCCTTTGTTCCTGCTCCACCAGAGGTTGCAATGCAGATGTTTAGGGATCAAGGAGGTCCATCTTCATATGATC CATCCGGAATGAACATGCGATCCGGTCCTCACATGGGTGGACCTGCACCAATAATGGCTGTTCCTCCAGGATTTAGACCT GATCCGCGACGAATGCGAAGGTAATTTATAATGCAGGACCCTTGTTCAGATGTTCCCTTATGTTATCTCCTCCAAACCCT ACCATATCTCTTCTTCGCTGCTTGTATATGTAATCTTTAGACCTTAATTGCCATGTCCTTTTTACTTGGCCTGAGAATGC ATTTTGTATCATCTATTAGTCAAATTCTTTATCCATTTCCTTACATATCAATTTTATGTTGATGTTATTTATTTTTTACT TTCGAAAGGCAAGTTCATTCTTAGAAAGCTCCTTTTATTATTTCGTTAGCTATTTTACCCTGAAAATATGAAAGTTCTTT GAGAATAGCAATAATATGCTCAAGGATATCCTTGAACTAAAGATTAGGACTCCCAACTCTATCTGGGGATATTCAATTTT CTCTAGCATGTACTGATTTTCCCAATGTTGTGCAGTTATCAAGATTTGGATGCCCCAGAAGACGAAGTCACTGTGATAGA CTATCGGAGCTTGTAGGTATGACTGAGTTTGGCTGAGTATCTCTAATTTCAATGGCATTGGGTAGGCAGCATGTTTGTTC CTGTCAATGAGAGCAGCAGATTAATAGTACTAATGGGTTCAGGCTTTCGTTTGTTTAGTGAATTTGCTACTTTGATGTAG GTTGAAAGATAATATTTGTTCAGATTTTTAGATTTCTTGACCAAAATGCCATCTGACTGGTCGGCCTACTTTCAATTGAC GATTGTATTTAAATTTAAGGCTGAATTATTTGTAGAGATACAAGCAAATATAAGACCTTATCCCCCTCCCCCCAAACAAA ATACAATGACTGATTTTACTTGGTTCCTATTAGGCCGAGCGAGACCTATTGTTTTTGGATGCTTAAATCACTTTTATTCT AAACTTAACTTTGAACGCTCAATGTCATCAATACCTGCACAGATTATATGCC
CDS sequence (LotjaGi3g1v0101300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGAGGTAATCAACTTGCCACCCGAATCTCTCGATCGATCTCCCTCCGCTTCCGCTCCTCCGCCGCCACCGGCGGC TCCACCTGCTCCTATTCCTCCTACCTCATCCTCCGCTGCCGATGACGATCTCCCGCCGCCTCCTCCCCCTCGCCGGAGGG ACCGCCGTGACGACCGTGATTTCGACCGCCCCCGCGGCGGCCGGGATTACTACGACCGTGATAGGGACTTCAAGCGCCGC CGCAGCCCTAGCCCTGGCTACCGCGATCGCCGCCATTCCCCTCCCCGACGTTCACCGCCTCCGTATAAGCGATCTAGAAG GGGCAGCCCCCGCGGTTATGGACCCGATGACAGGTTTGGACATAATTACTCTGGTGGCTATGAACGGGGAGTGGGTGGAA GGACTGGTTACGCAAATGAAAGGTCGTATGGCAGGTTTGGACATCGATCTGCTGGGGGATTTCAAAATGGAAATTCTGAT GTGGATATGAATCGTGGTTATTCAGATTTGCCAAGTGGAGGTGCACAAAGAGAGGGGTTGATGTCCTATAAGCAATTCAT TCAGGAGCTTGAAGATGATGTACTGCCTGCTGAAGCTGAGCGTAGGTATCAAGAGTACAAATCAGAGTATATTTCTACTC AAAAACGAGCTTATTTTAATGCTCATAAGGATGAGGAGTGGTTGAAAGACAAGTATCATCCAACAAATTTACTTACAGTG ATTGAAAGGAGGAATGAAAATGCACGACGAGTGGCAAAGGATTTTTTGCTTGATTTGCAAAGTGGAACATTAGACCTGAA TTCTGGGTTAAACTCTTCTCCACCCAATAAATCAGGGCAGGCCAGCGAGGGAAATTCAGAGGAGGAAACAGATGCTAGTG GTAAACGAAGAAGACATGGTAGGGGATCCAATAACGATAATGATTTCTCAGCTGCTCCAAAGGCTCACCCTATTAGTTCT GAGGCTAGACGCATCCAAGCAGATATTCAACAGGCTCAGGCTGTTGTTCGTAAGCTTGACATCGAAAAGGGGATTGAAGA CAATATTTTATACACCAGTGATCAAAGTAAAAATGATGATAAGGCTCACAGTGGGTCTGTGGGCCCCATAGTAATTATCC GGGGCCTAGCATCTGTTAAGGGCTTGGAGGGTGTTGAGCTACTGGACACTCTTATTACATATCTTTGGCGGATTCATGGT ATTGATTATTATGGAATGGTGGAGACTAATGAGGCTAAAGGTTTTAGGCATGTGAGACCAGATGGAACCGGGCACGAAGA AGCAAGTAAATCAGGGCCAGAATGGGAGAAAAAACTTGATTCATTTTGGCAGGGAAGGTTGAATGGTCAGGATCCCTTGG ATGTAATGACTGCTAAGGAAAAGATAGATGCTGCAGCGACCGATTTTTTGGATCCACATGTTAGAAAAATAAGAGATGAA AAGTATGGATGGAAGTATGGTTGCGGAGCTAAGGGCTGCACAAAACTTTTTCATGCATCTGAGTTTGTGCATAAACATCT GAAGCTAAAACATCCAGAGCTTTTGATGGAACTAACGGCAAAATTGCGGGAAGATCTTTATTTTCAAAATTACATGAATG ATTCTAATGCACCTGGTGGAACACCTATCATGCAGCAACCTCAGAAGGACAGGACTCTAAAGCGTAGATTGCTTGATGCC CGATTGAAAGATGATAGGGGTAGTCGACGAGACATGGATAAGAGTGATAGAATAAATGGAGATAGGCCTGACAATTCTCC ATCCCGGGAAAGGCAACGGGGAAACCATGATGAAGGCGAAGCAATGTATGATTCATATGGAGGGCCTGCTGTACCTCCAT TTACCTCAGATATGCCCCCTCCTCCACCAGTTTTGATGCCTGTACCTGGTGCTGGGCCTTTGGGACCCTTTGTTCCTGCT CCACCAGAGGTTGCAATGCAGATGTTTAGGGATCAAGGAGGTCCATCTTCATATGATCCATCCGGAATGAACATGCGATC CGGTCCTCACATGGGTGGACCTGCACCAATAATGGCTGTTCCTCCAGGATTTAGACCTGATCCGCGACGAATGCGAAGTT ATCAAGATTTGGATGCCCCAGAAGACGAAGTCACTGTGATAGACTATCGGAGCTTGTAG
Protein sequence (LotjaGi3g1v0101300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAEVINLPPESLDRSPSASAPPPPPAAPPAPIPPTSSSAADDDLPPPPPPRRRDRRDDRDFDRPRGGRDYYDRDRDFKRR RSPSPGYRDRRHSPPRRSPPPYKRSRRGSPRGYGPDDRFGHNYSGGYERGVGGRTGYANERSYGRFGHRSAGGFQNGNSD VDMNRGYSDLPSGGAQREGLMSYKQFIQELEDDVLPAEAERRYQEYKSEYISTQKRAYFNAHKDEEWLKDKYHPTNLLTV IERRNENARRVAKDFLLDLQSGTLDLNSGLNSSPPNKSGQASEGNSEEETDASGKRRRHGRGSNNDNDFSAAPKAHPISS EARRIQADIQQAQAVVRKLDIEKGIEDNILYTSDQSKNDDKAHSGSVGPIVIIRGLASVKGLEGVELLDTLITYLWRIHG IDYYGMVETNEAKGFRHVRPDGTGHEEASKSGPEWEKKLDSFWQGRLNGQDPLDVMTAKEKIDAAATDFLDPHVRKIRDE KYGWKYGCGAKGCTKLFHASEFVHKHLKLKHPELLMELTAKLREDLYFQNYMNDSNAPGGTPIMQQPQKDRTLKRRLLDA RLKDDRGSRRDMDKSDRINGDRPDNSPSRERQRGNHDEGEAMYDSYGGPAVPPFTSDMPPPPPVLMPVPGAGPLGPFVPA PPEVAMQMFRDQGGPSSYDPSGMNMRSGPHMGGPAPIMAVPPGFRPDPRRMRSYQDLDAPEDEVTVIDYRSL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 712 | 712 | 0.0 | ||
| PANTHER | 1 | 712 | 712 | 0.0 | – | |
| MobiDBLite | 1 | 142 | 142 | - | – | |
| MobiDBLite | 15 | 45 | 31 | - | – | |
| MobiDBLite | 46 | 96 | 51 | - | – | |
| Pfam | 184 | 268 | 85 | 4.4E-22 | ||
| MobiDBLite | 265 | 287 | 23 | - | – | |
| MobiDBLite | 265 | 323 | 59 | - | – | |
| MobiDBLite | 288 | 304 | 17 | - | – | |
| Coils | 322 | 342 | 21 | - | – | |
| Pfam | 431 | 608 | 178 | 7.0E-31 | ||
| ProSitePatterns | 488 | 511 | 24 | - | ||
| MobiDBLite | 533 | 610 | 78 | - | – | |
| MobiDBLite | 533 | 548 | 16 | - | – | |
| MobiDBLite | 549 | 600 | 52 | - | – | |
| MobiDBLite | 652 | 699 | 48 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Biological process | MRNA processing | Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide. |
Expression pattern of LotjaGi3g1v0101300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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