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Field | Value |
---|---|
Gene ID | LotjaGi3g1v0101500 |
Transcript ID | LotjaGi3g1v0101500.1 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | CTD small phosphatase-like protein; TAIR: AT5G46410.1 SCP1-like small phosphatase 4; Swiss-Prot: sp|Q54GB2|CTSL2_DICDI CTD small phosphatase-like protein 2; TrEMBL-Plants: tr|A0A072UU09|A0A072UU09_MEDTR NLI interacting factor-like phosphatase; Found in the gene: LotjaGi3g1v0101500 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:12564384..12569634) extracted from Lotus japonicus Gifu genome v1.2.
CTCAGAATTCAAACCCAGCAAATCCCAACCGTCGAATCTGATCCTGATCTTGTAGTTCAAAATATAAAAGGAGATTCCCG CAGCAAAACATTCCATTGACCCCTTTTCGCTTCTCTGACTCACACCTCTCTCTTCTCCGTTCTAGAGAGAGAAACTCACT CTGAGCTAGAGAGAGAGAGAGAGAGAGAGGGGAAGAAGAAGAACAACAACAACAGAGTCAAAATTGCAGGTATCTATCTG TGTTTGAATTGTTGCGTTTTGCTTCAGAATTCAACCTTGCTTTTTCTTTTTTCTTGTGAATTTCTCATGATTGTTGATGA AGAGGCACAGGATCCAGGTTTTCTAGCTGTTTTGCTTGGATATGAATGATTTTCTTTGAAATTGTGTCAATTACTGTTTG CTTGATTCTCAATTCTCAATTCTCAATTACGTGTTTTTGCTTCTCTTTGCGATGAATTTTGGTTTTGTTTTTCACTCACT GAGTTGTTTTTCAGGTTTGTGGTTTTTTCGGTTTAGGGTATGTTTGGATGGAGTTTTCCAGGGAAATGGTATTTTTTTTA GATTGAGAGAATAAAGGGAAGAATTATGTGATTAATTTTGTGTTTAGTGAATATTTTATGTAAATTTTGTGCTAAAAATT TTCAATTTTGTGTTTGTTTATTTAAAGTGAAATTTTTGATTTTGTTTATTAGGGCGTGATTTTGTTTAGTTCGTGGATTG GATATAGAGAATAGCAGGAATGTGCTAAAGCTATGCGGGGATGATGGAAAAACCCCAACAATTGATAGGTATAGAAGTTT TATTTATTTTCTAGTGATTAACTGATTTGTTTGTTTGTATTTTTTTTGGGGGGAGAGAGAAGGGGAGTGATTTCTATGTA ACTTTTGTGGATGTGCAAATTCCGCTACGTGGGACCGGCGGAGGGTGCTTAGGGTTAGGGGGAGGAGGATAAGAGGATGG AAATTGGGGTGATGAGCATTTCTGGGGATCCAATTCGATTACTCTCGCCGTATGCCCTTAGCTCCCAACTGAATTGCTAT TACAGGGCTGAGCTAGACAACTTCTGTATGTACCCTCGGTAACTAGGTTAAGCCGTTGTGTGGGTGATACATGTGGATAC AGCTATGAAATCCTTATACACGACGAACGGTTAGATAAATGAATTTGAACCCATTTGGATGCAAGCCAGAGCTCCAGTAA GTCTGTAGCTAAAATGGCTCTCTCTAATATTGTTAAAGATCTTCAAGCTGATAACTGAGCTAAAGGGTAGCTAAGGATTT GACTCAGTGATGCTATGTCTCCCGCTTCATGCTTGATGTAGTACAATAGATACTTTATTTATGAGGGTTCTATGAGCTTT TTGAAAGTTTTCGTAATAGGAGCTATGATTTGTTGACTTCTATATTTTCATTTTTGAAATACTTTCTTGTTTTCCATGAG CTGAATGCCTATTACTTTAGACTGGTATAAAGGCCATGCTTATTACTTAATCAGTATAATTTGTATATGATCCATTTTGC ATTTCATTTATGTATATATGTTTTGTATGATTATCATTATGTTGTTGCTTCTTAGAGTTCAATGCAAACTAAGAACTGTC AGTAGCTTGTACTAACTTTAGATTAATCTTCAGAAGCCCAGATTCAATGCCGGCCGTTAAAATGAAGGCCAAGTCAACTA CAACCTGCAAAAGAAAAGGAAGTTATCCCCATGAGTCTCTGACGTCAAATAAAAGTTGTAAAACACCATTTTCCATGGTC AGAGCAACTCATGAAATGGAAAATTTAGCTGCATCAAGCCAAACATCTCATGATGGTAAACATTAATATGTTATATAAAA TGCAATCTCCATGGCATTAATGTAGTTGCTTCCATGGAATCTTTTGATATTCATATGGAACATATGGTGTAAATAAAGGC AATATATTTAGTTGGACATGTTTGATGTAGGTTTTGCTGCAATTGAAGAATTTTCCAATGAGCATGATGATGGAAAGAAC TTAATGTCATCTAATATAGATATTATTGACGGGCAAACTTGTCTTCCAGTCAACGCAGATTCAATAGAAGAAAGGGTAAG GCTCAGCTTCATCCCATGTCTTTATATGATATGAAATAGGGTGGTGGCCCTTGCTTAATCAATTAGCCCTTTTTATGTGT GGATATCTAATAAAAGATTCGCTTGTATCAGTTAATAATTATAAGCTACTAACTTCAATTTGTGAGTAAATATAGCCTTG GAATTTTCTGTTCAATGAAAATTGGTCTGTTGCAATATAATTCTGCTGCTGCTTTCTATATCCTTCAAATAAATACAAAT CTCTTTGCTTGACCTTACTAATTACTGCCATGGTTTTTTTGTGACAGGATTCTTTGCCATTTTCTCATCCATCAAGTTCA GATACAATGATGTCTGATTTTAACAGGCCTAATGACGGCCATTCTAATCAATTAGAAACAGGTACCCACTTGAAACCACA TTATTTGAAGTTTTTTCTTTTTTTATACATAATATAGAAACCCAACTAAAAAACTAACGAACGATACAGTTGTTGAGGAT GAAGCATCCACTTAGTGAAACCAAAAGATAAGATACAATTTGACACAGGATGAACATATCCATACAATGTTGCTATCCTA TCCTTTCCTTTCCTAACAAACAAGCTACTAAGAATAACCATTAACCAGAGCACCATAACTACTACAAAAGAACAACTTCT GCTTGCTAATTTACCTACTACTGAAAAAAATTTAATATCAGTAATCATCCTTAGTACTTACTAGGATTCTGGACTGAGAA CTTTCTAAATGTATTGACTTAGACTTATAGTACGAGGCTTTGTTGAATCTGGAATCTGACCGATATAAATGTTTAATGGA TATATTAGTTTAATTCCAGCATGCCCTTGCCAAGTTGCCACCCCTTCCCCAAGTGGCTCAAGCTGCTTTTGTGAATGTTG TCTACTTGCTTTTTTATTATATTAAATTCACTCTACTGGACTTCTGTTTGTAACAAATGTGGGGACTTCATTGTTATTGC AGTTACTAGGGAGCAAATCTCCACGGCACCTCAAGTGGATGATAATAACTTACCCAATTTCCAAATGCCGGATATGTTAG ACTCCTACGCATGTGAAATGTTTCTCAATGGGTTTTCCATTGACGGGATCAATATATTTGGCGATAATCTATTTGGTGAT GGTCACAATAGTTCCCTTTCTGATCTTGAATTTTTTGCCACAAACTTGATATGTGATCTTCCCACCCTTGAGGACACAAT CGAAGCAGTAGATCACCATTATGGAGGATCTTGTGAAGAGTTTCTGCAGATGTCTGATCCTTCATGGTTCCAGCTCATAT GCCATCAGGCCAAGCCTATTGAAGAACCCGATGTCAAGTCCAGTCAGTTTGATTCAGCCAGAGTAGATTATTCTGATCCA GAGGCATTCATTAGAAATATTTTGGATTTATCAGATGAATCTAACTCATTGCCTGGACTAGTAAGCGAGGAAACAGGCAA CATGAAGCACATTACCCTTGTTCTTGATCTGGATGGTAATTTTTTTACTTCTGTCTGCTCGTCTGTTTTTATTCAAATAT AGATATGTTGAATCCATGGGGGCATCTTGAATTATATCGTGATCAATTAGCTTCGCCACCGTAAAATCTGTAGATAACTG TTTCCTATTGGGCAACATGTTATCCTTTGGATTAGTATGGGTTGGTATCATTTCAATCAAAGGCAAATCACCACAAAATT GAATTATTTAACCCTAATCTTTTATCTAAATAATGGGATAACAACATCCATGTTCTTGTCTCTTGTTTTTGCTTCTTACA GTGTAGCTTATGTTTTTTCATCCAATGCTGGATTGGTGCTTTAGGATAAATATGAGAAATGTTGCTAAATTTTCAGTTAG TATTCTGAAAAAAAAAAATTATGATGTGTGATATATTGTTGGTTCACCTCTGCAGAAACGCTGGTCCATTCCTCAATGGT ACCGTGTGATAGAGCTGACTTCACAATTAAAATTTTCCTTGACAAGGAGCACACTGTATATGTGAGACAGAGGCCTTTCC TCCAAACATTTCTGGAGAAAGTATCAGAGAAGTTTGAAATCATCATTTTCACAGCTAGTAAAAAGTTATATGCTGATAAA TTGCTGGATGTGCTTGATCCTGAAAATAAGTTTTTTTCACGACGATTGTACCGGGATTCATGCATCTTTGAAGATAGTAT CTACACCAAAGATTTGACTGTTCTTGGAATTGACCTGGCAAAAGTATTCATAATCGACAACTCTCCTCAGGTATTTCCTT GCCCTACATCACTCTTCATTTATTTCTTTCATGCACCAAAAAGTTTGGTGCTGTATCAGGTATTGCAATTTGTAACACTT AATAGGAGTTTACTTAAAAATACCTATTTTAGATAATATGCGTGACTTTCTTTCTAGTATGCATGGATTATTTGCTTCTA TTGGAAAATACTCAGCTAAATAGAAATTTATTGTTATTAATTATCAGAAGTAGTCCTTTTATTTGTTTGGTCCTTTATTG CCTATGGTATAACTTTGTCTCTGTTATCATATCAGGTGTACAGGTTGCAAGTTAATAATGGGATTCCTATTGTAAGTTGG TATGAAGATCCTTCTGATATTGCTCTGATTTCTTTGCTCCCTTTCCTGGAGGAACTGGCTGATGTGGATGATGTTCGCCC CATCATTGCACAGAAATTCGGGGCTAGGAATAAATAGTTTTGCATTACAGCTTACTGGCATTGAATTCTAGATGATGATG ATGCCCTTGCCCTTTTTGGAAGTAGTAATAATGACTCTAATCTTAGGATATTTCATCTTTTGAATAACCCTGCCTAGTCA GTGATTTACCCGTGATGTTTGAATTAGCTTCTCTTTTATCAGAATCAATTCTGAAACTAGAAGCTACTCATAGAAGCTTC TTTCCAGAATTGATTCTGTGATAGCCAGATAGTATTCGTTGAAAAACATGTAAATAAGCCGCACAATAATTTGGTTTCAA GTTTTTGGATTTTGATATCATTGTTAGATATACACATTATTAATTTTTAAAGAGGAGTGTTATTGAGTGTTATATTTCAT TCCTTCTTACATCAAAATGTTAATGCTATTTATGCATGCTGTTTGTACTTGTTTGGAACTGAATTTTGGTTCACAATTCA GTGCACACACTAACTGTGAAGTTACGTCTGCTAACTTTGGATTGGACGCGA
CDS sequence (LotjaGi3g1v0101500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCGGCCGTTAAAATGAAGGCCAAGTCAACTACAACCTGCAAAAGAAAAGGAAGTTATCCCCATGAGTCTCTGACGTC AAATAAAAGTTGTAAAACACCATTTTCCATGGTCAGAGCAACTCATGAAATGGAAAATTTAGCTGCATCAAGCCAAACAT CTCATGATGGTTTTGCTGCAATTGAAGAATTTTCCAATGAGCATGATGATGGAAAGAACTTAATGTCATCTAATATAGAT ATTATTGACGGGCAAACTTGTCTTCCAGTCAACGCAGATTCAATAGAAGAAAGGGATTCTTTGCCATTTTCTCATCCATC AAGTTCAGATACAATGATGTCTGATTTTAACAGGCCTAATGACGGCCATTCTAATCAATTAGAAACAGTTACTAGGGAGC AAATCTCCACGGCACCTCAAGTGGATGATAATAACTTACCCAATTTCCAAATGCCGGATATGTTAGACTCCTACGCATGT GAAATGTTTCTCAATGGGTTTTCCATTGACGGGATCAATATATTTGGCGATAATCTATTTGGTGATGGTCACAATAGTTC CCTTTCTGATCTTGAATTTTTTGCCACAAACTTGATATGTGATCTTCCCACCCTTGAGGACACAATCGAAGCAGTAGATC ACCATTATGGAGGATCTTGTGAAGAGTTTCTGCAGATGTCTGATCCTTCATGGTTCCAGCTCATATGCCATCAGGCCAAG CCTATTGAAGAACCCGATGTCAAGTCCAGTCAGTTTGATTCAGCCAGAGTAGATTATTCTGATCCAGAGGCATTCATTAG AAATATTTTGGATTTATCAGATGAATCTAACTCATTGCCTGGACTAGTAAGCGAGGAAACAGGCAACATGAAGCACATTA CCCTTGTTCTTGATCTGGATGAAACGCTGGTCCATTCCTCAATGGTACCGTGTGATAGAGCTGACTTCACAATTAAAATT TTCCTTGACAAGGAGCACACTGTATATGTGAGACAGAGGCCTTTCCTCCAAACATTTCTGGAGAAAGTATCAGAGAAGTT TGAAATCATCATTTTCACAGCTAGTAAAAAGTTATATGCTGATAAATTGCTGGATGTGCTTGATCCTGAAAATAAGTTTT TTTCACGACGATTGTACCGGGATTCATGCATCTTTGAAGATAGTATCTACACCAAAGATTTGACTGTTCTTGGAATTGAC CTGGCAAAAGTATTCATAATCGACAACTCTCCTCAGGTGTACAGGTTGCAAGTTAATAATGGGATTCCTATTGTAAGTTG GTATGAAGATCCTTCTGATATTGCTCTGATTTCTTTGCTCCCTTTCCTGGAGGAACTGGCTGATGTGGATGATGTTCGCC CCATCATTGCACAGAAATTCGGGGCTAGGAATAAATAG
Protein sequence (LotjaGi3g1v0101500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPAVKMKAKSTTTCKRKGSYPHESLTSNKSCKTPFSMVRATHEMENLAASSQTSHDGFAAIEEFSNEHDDGKNLMSSNID IIDGQTCLPVNADSIEERDSLPFSHPSSSDTMMSDFNRPNDGHSNQLETVTREQISTAPQVDDNNLPNFQMPDMLDSYAC EMFLNGFSIDGINIFGDNLFGDGHNSSLSDLEFFATNLICDLPTLEDTIEAVDHHYGGSCEEFLQMSDPSWFQLICHQAK PIEEPDVKSSQFDSARVDYSDPEAFIRNILDLSDESNSLPGLVSEETGNMKHITLVLDLDETLVHSSMVPCDRADFTIKI FLDKEHTVYVRQRPFLQTFLEKVSEKFEIIIFTASKKLYADKLLDVLDPENKFFSRRLYRDSCIFEDSIYTKDLTVLGID LAKVFIIDNSPQVYRLQVNNGIPIVSWYEDPSDIALISLLPFLEELADVDDVRPIIAQKFGARNK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 463 | 463 | 4.6E-170 | – | |
PANTHER | 1 | 463 | 463 | 4.6E-170 | – | |
MobiDBLite | 1 | 27 | 27 | - | – | |
MobiDBLite | 13 | 27 | 15 | - | – | |
Gene3D | 280 | 461 | 182 | 5.8E-66 | ||
ProSiteProfiles | 288 | 446 | 159 | 44.65 | ||
SUPERFAMILY | 289 | 457 | 169 | 6.57E-54 | ||
SMART | 291 | 434 | 144 | 8.4E-57 | ||
TIGRFAM | 293 | 456 | 164 | 4.0E-60 | ||
CDD | 293 | 424 | 132 | 2.44245E-54 | – | |
Pfam | 294 | 453 | 160 | 2.0E-52 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Phosphatase activity | Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate. |
Expression pattern of LotjaGi3g1v0101500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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