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LotjaGi3g1v0101500.1

Overview

Field Value
Gene ID LotjaGi3g1v0101500
Transcript ID LotjaGi3g1v0101500.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description CTD small phosphatase-like protein; TAIR: AT5G46410.1 SCP1-like small phosphatase 4; Swiss-Prot: sp|Q54GB2|CTSL2_DICDI CTD small phosphatase-like protein 2; TrEMBL-Plants: tr|A0A072UU09|A0A072UU09_MEDTR NLI interacting factor-like phosphatase; Found in the gene: LotjaGi3g1v0101500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:12564384..12569634) extracted from Lotus japonicus Gifu genome v1.2.

CTCAGAATTCAAACCCAGCAAATCCCAACCGTCGAATCTGATCCTGATCTTGTAGTTCAAAATATAAAAGGAGATTCCCG CAGCAAAACATTCCATTGACCCCTTTTCGCTTCTCTGACTCACACCTCTCTCTTCTCCGTTCTAGAGAGAGAAACTCACT CTGAGCTAGAGAGAGAGAGAGAGAGAGAGGGGAAGAAGAAGAACAACAACAACAGAGTCAAAATTGCAGGTATCTATCTG TGTTTGAATTGTTGCGTTTTGCTTCAGAATTCAACCTTGCTTTTTCTTTTTTCTTGTGAATTTCTCATGATTGTTGATGA AGAGGCACAGGATCCAGGTTTTCTAGCTGTTTTGCTTGGATATGAATGATTTTCTTTGAAATTGTGTCAATTACTGTTTG CTTGATTCTCAATTCTCAATTCTCAATTACGTGTTTTTGCTTCTCTTTGCGATGAATTTTGGTTTTGTTTTTCACTCACT GAGTTGTTTTTCAGGTTTGTGGTTTTTTCGGTTTAGGGTATGTTTGGATGGAGTTTTCCAGGGAAATGGTATTTTTTTTA GATTGAGAGAATAAAGGGAAGAATTATGTGATTAATTTTGTGTTTAGTGAATATTTTATGTAAATTTTGTGCTAAAAATT TTCAATTTTGTGTTTGTTTATTTAAAGTGAAATTTTTGATTTTGTTTATTAGGGCGTGATTTTGTTTAGTTCGTGGATTG GATATAGAGAATAGCAGGAATGTGCTAAAGCTATGCGGGGATGATGGAAAAACCCCAACAATTGATAGGTATAGAAGTTT TATTTATTTTCTAGTGATTAACTGATTTGTTTGTTTGTATTTTTTTTGGGGGGAGAGAGAAGGGGAGTGATTTCTATGTA ACTTTTGTGGATGTGCAAATTCCGCTACGTGGGACCGGCGGAGGGTGCTTAGGGTTAGGGGGAGGAGGATAAGAGGATGG AAATTGGGGTGATGAGCATTTCTGGGGATCCAATTCGATTACTCTCGCCGTATGCCCTTAGCTCCCAACTGAATTGCTAT TACAGGGCTGAGCTAGACAACTTCTGTATGTACCCTCGGTAACTAGGTTAAGCCGTTGTGTGGGTGATACATGTGGATAC AGCTATGAAATCCTTATACACGACGAACGGTTAGATAAATGAATTTGAACCCATTTGGATGCAAGCCAGAGCTCCAGTAA GTCTGTAGCTAAAATGGCTCTCTCTAATATTGTTAAAGATCTTCAAGCTGATAACTGAGCTAAAGGGTAGCTAAGGATTT GACTCAGTGATGCTATGTCTCCCGCTTCATGCTTGATGTAGTACAATAGATACTTTATTTATGAGGGTTCTATGAGCTTT TTGAAAGTTTTCGTAATAGGAGCTATGATTTGTTGACTTCTATATTTTCATTTTTGAAATACTTTCTTGTTTTCCATGAG CTGAATGCCTATTACTTTAGACTGGTATAAAGGCCATGCTTATTACTTAATCAGTATAATTTGTATATGATCCATTTTGC ATTTCATTTATGTATATATGTTTTGTATGATTATCATTATGTTGTTGCTTCTTAGAGTTCAATGCAAACTAAGAACTGTC AGTAGCTTGTACTAACTTTAGATTAATCTTCAGAAGCCCAGATTCAATGCCGGCCGTTAAAATGAAGGCCAAGTCAACTA CAACCTGCAAAAGAAAAGGAAGTTATCCCCATGAGTCTCTGACGTCAAATAAAAGTTGTAAAACACCATTTTCCATGGTC AGAGCAACTCATGAAATGGAAAATTTAGCTGCATCAAGCCAAACATCTCATGATGGTAAACATTAATATGTTATATAAAA TGCAATCTCCATGGCATTAATGTAGTTGCTTCCATGGAATCTTTTGATATTCATATGGAACATATGGTGTAAATAAAGGC AATATATTTAGTTGGACATGTTTGATGTAGGTTTTGCTGCAATTGAAGAATTTTCCAATGAGCATGATGATGGAAAGAAC TTAATGTCATCTAATATAGATATTATTGACGGGCAAACTTGTCTTCCAGTCAACGCAGATTCAATAGAAGAAAGGGTAAG GCTCAGCTTCATCCCATGTCTTTATATGATATGAAATAGGGTGGTGGCCCTTGCTTAATCAATTAGCCCTTTTTATGTGT GGATATCTAATAAAAGATTCGCTTGTATCAGTTAATAATTATAAGCTACTAACTTCAATTTGTGAGTAAATATAGCCTTG GAATTTTCTGTTCAATGAAAATTGGTCTGTTGCAATATAATTCTGCTGCTGCTTTCTATATCCTTCAAATAAATACAAAT CTCTTTGCTTGACCTTACTAATTACTGCCATGGTTTTTTTGTGACAGGATTCTTTGCCATTTTCTCATCCATCAAGTTCA GATACAATGATGTCTGATTTTAACAGGCCTAATGACGGCCATTCTAATCAATTAGAAACAGGTACCCACTTGAAACCACA TTATTTGAAGTTTTTTCTTTTTTTATACATAATATAGAAACCCAACTAAAAAACTAACGAACGATACAGTTGTTGAGGAT GAAGCATCCACTTAGTGAAACCAAAAGATAAGATACAATTTGACACAGGATGAACATATCCATACAATGTTGCTATCCTA TCCTTTCCTTTCCTAACAAACAAGCTACTAAGAATAACCATTAACCAGAGCACCATAACTACTACAAAAGAACAACTTCT GCTTGCTAATTTACCTACTACTGAAAAAAATTTAATATCAGTAATCATCCTTAGTACTTACTAGGATTCTGGACTGAGAA CTTTCTAAATGTATTGACTTAGACTTATAGTACGAGGCTTTGTTGAATCTGGAATCTGACCGATATAAATGTTTAATGGA TATATTAGTTTAATTCCAGCATGCCCTTGCCAAGTTGCCACCCCTTCCCCAAGTGGCTCAAGCTGCTTTTGTGAATGTTG TCTACTTGCTTTTTTATTATATTAAATTCACTCTACTGGACTTCTGTTTGTAACAAATGTGGGGACTTCATTGTTATTGC AGTTACTAGGGAGCAAATCTCCACGGCACCTCAAGTGGATGATAATAACTTACCCAATTTCCAAATGCCGGATATGTTAG ACTCCTACGCATGTGAAATGTTTCTCAATGGGTTTTCCATTGACGGGATCAATATATTTGGCGATAATCTATTTGGTGAT GGTCACAATAGTTCCCTTTCTGATCTTGAATTTTTTGCCACAAACTTGATATGTGATCTTCCCACCCTTGAGGACACAAT CGAAGCAGTAGATCACCATTATGGAGGATCTTGTGAAGAGTTTCTGCAGATGTCTGATCCTTCATGGTTCCAGCTCATAT GCCATCAGGCCAAGCCTATTGAAGAACCCGATGTCAAGTCCAGTCAGTTTGATTCAGCCAGAGTAGATTATTCTGATCCA GAGGCATTCATTAGAAATATTTTGGATTTATCAGATGAATCTAACTCATTGCCTGGACTAGTAAGCGAGGAAACAGGCAA CATGAAGCACATTACCCTTGTTCTTGATCTGGATGGTAATTTTTTTACTTCTGTCTGCTCGTCTGTTTTTATTCAAATAT AGATATGTTGAATCCATGGGGGCATCTTGAATTATATCGTGATCAATTAGCTTCGCCACCGTAAAATCTGTAGATAACTG TTTCCTATTGGGCAACATGTTATCCTTTGGATTAGTATGGGTTGGTATCATTTCAATCAAAGGCAAATCACCACAAAATT GAATTATTTAACCCTAATCTTTTATCTAAATAATGGGATAACAACATCCATGTTCTTGTCTCTTGTTTTTGCTTCTTACA GTGTAGCTTATGTTTTTTCATCCAATGCTGGATTGGTGCTTTAGGATAAATATGAGAAATGTTGCTAAATTTTCAGTTAG TATTCTGAAAAAAAAAAATTATGATGTGTGATATATTGTTGGTTCACCTCTGCAGAAACGCTGGTCCATTCCTCAATGGT ACCGTGTGATAGAGCTGACTTCACAATTAAAATTTTCCTTGACAAGGAGCACACTGTATATGTGAGACAGAGGCCTTTCC TCCAAACATTTCTGGAGAAAGTATCAGAGAAGTTTGAAATCATCATTTTCACAGCTAGTAAAAAGTTATATGCTGATAAA TTGCTGGATGTGCTTGATCCTGAAAATAAGTTTTTTTCACGACGATTGTACCGGGATTCATGCATCTTTGAAGATAGTAT CTACACCAAAGATTTGACTGTTCTTGGAATTGACCTGGCAAAAGTATTCATAATCGACAACTCTCCTCAGGTATTTCCTT GCCCTACATCACTCTTCATTTATTTCTTTCATGCACCAAAAAGTTTGGTGCTGTATCAGGTATTGCAATTTGTAACACTT AATAGGAGTTTACTTAAAAATACCTATTTTAGATAATATGCGTGACTTTCTTTCTAGTATGCATGGATTATTTGCTTCTA TTGGAAAATACTCAGCTAAATAGAAATTTATTGTTATTAATTATCAGAAGTAGTCCTTTTATTTGTTTGGTCCTTTATTG CCTATGGTATAACTTTGTCTCTGTTATCATATCAGGTGTACAGGTTGCAAGTTAATAATGGGATTCCTATTGTAAGTTGG TATGAAGATCCTTCTGATATTGCTCTGATTTCTTTGCTCCCTTTCCTGGAGGAACTGGCTGATGTGGATGATGTTCGCCC CATCATTGCACAGAAATTCGGGGCTAGGAATAAATAGTTTTGCATTACAGCTTACTGGCATTGAATTCTAGATGATGATG ATGCCCTTGCCCTTTTTGGAAGTAGTAATAATGACTCTAATCTTAGGATATTTCATCTTTTGAATAACCCTGCCTAGTCA GTGATTTACCCGTGATGTTTGAATTAGCTTCTCTTTTATCAGAATCAATTCTGAAACTAGAAGCTACTCATAGAAGCTTC TTTCCAGAATTGATTCTGTGATAGCCAGATAGTATTCGTTGAAAAACATGTAAATAAGCCGCACAATAATTTGGTTTCAA GTTTTTGGATTTTGATATCATTGTTAGATATACACATTATTAATTTTTAAAGAGGAGTGTTATTGAGTGTTATATTTCAT TCCTTCTTACATCAAAATGTTAATGCTATTTATGCATGCTGTTTGTACTTGTTTGGAACTGAATTTTGGTTCACAATTCA GTGCACACACTAACTGTGAAGTTACGTCTGCTAACTTTGGATTGGACGCGA
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0101500.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGCCGGCCGTTAAAATGAAGGCCAAGTCAACTACAACCTGCAAAAGAAAAGGAAGTTATCCCCATGAGTCTCTGACGTC AAATAAAAGTTGTAAAACACCATTTTCCATGGTCAGAGCAACTCATGAAATGGAAAATTTAGCTGCATCAAGCCAAACAT CTCATGATGGTTTTGCTGCAATTGAAGAATTTTCCAATGAGCATGATGATGGAAAGAACTTAATGTCATCTAATATAGAT ATTATTGACGGGCAAACTTGTCTTCCAGTCAACGCAGATTCAATAGAAGAAAGGGATTCTTTGCCATTTTCTCATCCATC AAGTTCAGATACAATGATGTCTGATTTTAACAGGCCTAATGACGGCCATTCTAATCAATTAGAAACAGTTACTAGGGAGC AAATCTCCACGGCACCTCAAGTGGATGATAATAACTTACCCAATTTCCAAATGCCGGATATGTTAGACTCCTACGCATGT GAAATGTTTCTCAATGGGTTTTCCATTGACGGGATCAATATATTTGGCGATAATCTATTTGGTGATGGTCACAATAGTTC CCTTTCTGATCTTGAATTTTTTGCCACAAACTTGATATGTGATCTTCCCACCCTTGAGGACACAATCGAAGCAGTAGATC ACCATTATGGAGGATCTTGTGAAGAGTTTCTGCAGATGTCTGATCCTTCATGGTTCCAGCTCATATGCCATCAGGCCAAG CCTATTGAAGAACCCGATGTCAAGTCCAGTCAGTTTGATTCAGCCAGAGTAGATTATTCTGATCCAGAGGCATTCATTAG AAATATTTTGGATTTATCAGATGAATCTAACTCATTGCCTGGACTAGTAAGCGAGGAAACAGGCAACATGAAGCACATTA CCCTTGTTCTTGATCTGGATGAAACGCTGGTCCATTCCTCAATGGTACCGTGTGATAGAGCTGACTTCACAATTAAAATT TTCCTTGACAAGGAGCACACTGTATATGTGAGACAGAGGCCTTTCCTCCAAACATTTCTGGAGAAAGTATCAGAGAAGTT TGAAATCATCATTTTCACAGCTAGTAAAAAGTTATATGCTGATAAATTGCTGGATGTGCTTGATCCTGAAAATAAGTTTT TTTCACGACGATTGTACCGGGATTCATGCATCTTTGAAGATAGTATCTACACCAAAGATTTGACTGTTCTTGGAATTGAC CTGGCAAAAGTATTCATAATCGACAACTCTCCTCAGGTGTACAGGTTGCAAGTTAATAATGGGATTCCTATTGTAAGTTG GTATGAAGATCCTTCTGATATTGCTCTGATTTCTTTGCTCCCTTTCCTGGAGGAACTGGCTGATGTGGATGATGTTCGCC CCATCATTGCACAGAAATTCGGGGCTAGGAATAAATAG
Download CDS Sequence

Protein sequence (LotjaGi3g1v0101500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MPAVKMKAKSTTTCKRKGSYPHESLTSNKSCKTPFSMVRATHEMENLAASSQTSHDGFAAIEEFSNEHDDGKNLMSSNID IIDGQTCLPVNADSIEERDSLPFSHPSSSDTMMSDFNRPNDGHSNQLETVTREQISTAPQVDDNNLPNFQMPDMLDSYAC EMFLNGFSIDGINIFGDNLFGDGHNSSLSDLEFFATNLICDLPTLEDTIEAVDHHYGGSCEEFLQMSDPSWFQLICHQAK PIEEPDVKSSQFDSARVDYSDPEAFIRNILDLSDESNSLPGLVSEETGNMKHITLVLDLDETLVHSSMVPCDRADFTIKI FLDKEHTVYVRQRPFLQTFLEKVSEKFEIIIFTASKKLYADKLLDVLDPENKFFSRRLYRDSCIFEDSIYTKDLTVLGID LAKVFIIDNSPQVYRLQVNNGIPIVSWYEDPSDIALISLLPFLEELADVDDVRPIIAQKFGARNK
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR12210
1 463 463 4.6E-170 –
PANTHER
PTHR12210:SF133
1 463 463 4.6E-170 –
MobiDBLite
mobidb-lite
1 27 27 - –
MobiDBLite
mobidb-lite
13 27 15 - –
Gene3D
G3DSA:3.40.50.1000
280 461 182 5.8E-66
IPR023214
ProSiteProfiles
PS50969
288 446 159 44.65
IPR004274
SUPERFAMILY
SSF56784
289 457 169 6.57E-54
IPR036412
SMART
SM00577
291 434 144 8.4E-57
IPR004274
TIGRFAM
TIGR02251
293 456 164 4.0E-60
IPR011948
CDD
cd07521
293 424 132 2.44245E-54 –
Pfam
PF03031
294 453 160 2.0E-52
IPR004274

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016791
Molecular function Phosphatase activity Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0101500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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