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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0210000 |
| Transcript ID | LotjaGi3g1v0210000.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pyridoxal 5'-phosphate synthase subunit PdxT; TAIR: AT5G60540.1 pyridoxine biosynthesis 2; Swiss-Prot: sp|Q8LAD0|PDX2_ARATH Probable pyridoxal 5'-phosphate synthase subunit PDX2; TrEMBL-Plants: tr|I3SUR2|I3SUR2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0210000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:31266751..31272541) extracted from Lotus japonicus Gifu genome v1.2.
CCCTAACGCACCACGCATACCAAAACGAGAGGACCAAACTTGTTGCGCTATACACATATAAACCAAACTTTGCACTTTGC AGCAGCAGCAATAGCCACTATCTGTGTTTCAGAGTCACAGCATGGCCGTCGTTGGAGTCCTCGCGTTACAGGGATCTTTC CACGAACACATAGCAGGCATGTTTGTCTTTGTTTTTCTGTCTCAATCTCTCTTTCACTCCCTCACGTTTGTTGTTGTTTG TGGCAGCGCTGAGGAAGTTAGGAGTGAATGGGGTAGAGATTCGGAAGCCGGAGCAGCTTCTCAACGTGAATTCCCTCATC ATCCCTGGTGGTGAGAGCACTGCCATGGCTAAGCTTGCTGAGTACCACAACTTGGTATCTCCTCTACCTATCATCACTCT TTTCTACTTTTTTTCTTCTCTTTTGGTTTATCCTTTTAAACTGATATATGTTGATGAGTGGGATATCAGAAATGTTGTTA GTAATGGTATTGATATTTGATAACACCTTATTTTGTGTAATTTGATTATCCATTTTGTTAATGTTGCTGTGTTGTCTACT TTTGTAAAAGTAAATGGTACAATTATGTGGAATGGTATAGTGTGCTTGTACCTCATTTAGGGGATGTTTGCATCGTGTTC CATAGAGCAGAATCGTGTATCAAATGGAAAAGTTACTCAAGTAGCTTATGCACATACGCGATTCTGCTGCTCTTATGCGA TTCTGCTACCGTCTCCAAACCCGGTATTAGTTCATGAAAGTACGTTTACCTAAGATTAATCCTTAAATGTGCATTTTGTC ATTCAAATTAGTGTTTAAGATTTGTAACGCGTGGACTTGTCGCATTGAAGACATGCATTTATTTAGGATCTTGCGCCTAA TTTTTGTCGAAAAGTGACTAATATGATTGACGTTATATTTTAGGGGATTAATTTGATTATTATCATTTTTTTGTGCTTTT TGATTGACATCCCATTGACATTAGTTGCCTCTATTACAAAGTGGTTGCATAAAGTGATTAACTTTGTTTTGCAAAAAAAG CTCGTTATAACTTTGGTTGTATTGATTATGCTTTGTTGTGTTTTTTAAGTTGTGTGCAAAGAGTAAAATAGATAAAAGAA GTTACGAACTCTTGGCAGATTCTTTTCTTGCTTTTGTTTTTATTTTCTATAGTTGGGATCAGCATGAGGGGTACAGAGAG GACAGATGATGGAAAGGGAACAAGTTTTCTGATTTTGTCTGTCTGGTATTGGTTTTGAATGACGTGGGTTTCTGGGGCTG AATTTTGTATAATTACTTTGACCCTTCCTGTGGAGCTTCCCCCCTCCCCCCCAACATTGTAATTTTATTCTCCTGACTAG GGTAATACTTCTTGCTTTGATTGTGATCACGCATGATAATTTTTGTTGAATGTTTCAATTTATCAGTTTCCCGCCTTGCG AGAGTTTGTGCAATTGGGAAAGCCTGTTTGGGGAACCTGTGCAGGGCTAATATTCTTGGCAAATAAAGCTGCAGGTGGGT TGTTTCTCTCCTATTTCAGGGCCCTGTGTTGAATTTTAGACAATATCAAGTATTTCAATCTTATTTTATTTGTCACTTAA AGCATCTGTTAATGGTTTAAAAAGCTCAAATGGCAAACATGATTTCAGGACAGAAGATTGGTGGTCAAGAACTGGTTGGT GGCCTTGACTGTACTGTGCATAGAAATTTCTTTGGCAGCCAGGTAATGGACGTGCTGTGCGTTTTAAGCTGTATTTTGTT GAACAAACATAAATAGAACAAGAAGCCTAATTTAACCACAATGGGGAGCTATGGACATGAAAAAATCTGCTTAACTCCCA TTTTTTGTGAGAATAAAGGTATACGGTCATTCTGAATGGCCCATCATTTGACACATGAGCTTTTCATAATAGTGCCAACT GATAGTTACGGGCATGACAGTCAGTGACTCACTGCCATTAGGGATAAGAATCAAGCACTTACTAAGCTTTTCATTCCGCT CCATTCTTGATTCAGGTTTCTTATTATCTTTAATGTTCAAAATCTAAAATAGCTGCTTAAAATTCAGGGGTTTTGCGGAG TTTATTTTGCCAAAACAAACTTCTTTTGTTCCAACATATTTGGCATTCTTGGCATTGTAACTGATAAGATTATTGGAGTT CTTATATGACATTCTAACTGATAAGATTCTTGGAGTTCTTATATGCATATAAATAATATGTAATGCATAAAGCTACATGA AATTAAGGAGGAGAATGATGAGCTTGGCCTGAGAAACTAAGTTTTTGCTACACTTTGATTCTCTTGGTCACATTTAACCA ACAAATATATTTGTTCAGATTCAAAGCTTTGAGACAGAGCTTTCAGTTCCAGAGCTTGCATCCAAGGAAGGTGGCCCCGA AACGTTTCGTGGAATTTTTATTCGCGCCCCAGCAATTATTGAAGCTGGGCCAGATGTTCAAGTGCTGGCTGACTATCCTG TACGTTCTAACAGATTGTCCACTGCTGATTCCCCTACTGAAGACAAAAAGGTTCGTTATTTACATATGTAGAAATCTTCC AGCTTTCCTTTTTATGCATGTAAGACAAAAAATTCACTGATTGTAATTTACTAACTTTTCTCACTAAAGTTTTATTTTTT TGTCACTGAAGAGTAAATATGCCATTGACATAGTAAAATTTAGTTTAAGCGTGGGTCATTTGTTGACTCTAGTTTTAGGT TGTGAATGATGGTTATTGGTTAGTTCCAGAGCTATTAGATTTTAAAAGGTTCATGTCTGATGAAGTTAACGATGATAAAT GGCGAGAATGGACAGGATCAGATAAACATTATAAATAGTTGTGCATGTTGAAACTTCTTTCTGCAATGTTATTCACTGGC TAATTGACATATAAAGATATACCTAGGCACTTAATGTGTGCAATTATGTTTATGAAACTGAGATTTTGAGGATTGATATT AGAGGTGGAGGGCGGGGTGGCTCAGGGACATATTCACGCATGATAGGTATTGGTGTGATCAAAGGAAGGTGGGAAGTTGA TACTTTTATTGATGTGATCTCCCTTACCCTGGATCAAAGAACCCAAGTTACAAGGAGAAAGAATGATTACGTAAATGCTT TCCCCAGGAATTCGAGTTTTGGTCTCTGCCAACAAAAACTAACTGCTCAACTAACTTCGCTCATTTGCATATTCTCCCTC TATTTATGCCCTGCCTCTGCCACTGCAGTAACTAACTGTAGCATCTGTAACACTATAACTATCATGGTCCAAGTCTAACA GAGGTTGGCCCACCTGGCTCTTAGTGTCCATCCTTATATTGCTTCCAGGTTCTTTTAATTCAGTGGCATAGCTTGGGGTC CTAGATAGTCTCATCCATGCAAATATGAATTTCTGATGGAGAAACTCAAAGAATAAAGGAGTAGAAAAAAGGGCATTACT TATAGCAGTGTTTTTAACAGTGTGCTATAGGGCGGTAGCGGCTCGTAGTGGGGCACTGGTTGCTGTGTAATTTTGCAGTT TAGAAGAGGATGATTGGTGATTCGTATTTAGGAAACTTTTATTTAAATTTTAACGTTTTTAGGTAGTTTAATTTAAGGCT TAGAGGCTTAAACTTCTTGATTTCCTTGACTTTTGTTGGCATTTATTTGAATGTTTTGTTTAAGAAGCCTATGACTCTTA TTGTCCATTATGGATGTCGTGAATTTTAAGTATGTTTTATCCTTTTGAGCATTTATATATGTAATGTAAATTGTATTTAA AATTTAGCAGTGGCTAACCTCCTATGTCCTATACCCGCTATAGTGCTTTAGATTTGGCCACTACCGGGATTGACAACACT GATTTTTAAAAATAAATTATTACAAGGATATGAAGTTTCAATCTTTATAAGTTTGGGGACTATTATTGAAGGAATAACTG CTGAGAAGTTTCCTTCTTGTTTATCTACTTATTCTCCTTCAAACAGTTCTCTACTTTTGAGAAAGCATTTCATAGTAGTG TTACTTCAGGATATTTAGTTTCCAAACCCAATATGTTGGATTCATCTTCATAGACACAATGAACTACTGATATACTTCAT TATTTGGTTTGTTTGTCTTAATTAACATGGATTGGCAATTGGCCATAGCCTTTTTTGGCTTTGGTAGTTGAGGATAATCC TTGTTTTTATAATTAAACAATTGAATGCCCTTAGAGCATCTCCAATGTTAGTTCTTATTTCTTAGTTCTTAGCACTATTC ATGTGAGTTCGTATTGCCACATGTGTTTAAGCAACTCTCAAACAATTTTGCTCCAACCATGAGTTCTTAGTTCTTACCAC TATTCATTTGATCCCACCAACCACATTATTTGTACTTTTTATTTTCATAAAGTAATAAAACAAAATTCATAAAGTAATAA AGTAATTTGGATAAGAGAGAAATAATTAATATTTTAAGCTATGAACTCAAAAAGCAAAACTCCTTATATAAGAACTGAGT TCTTATTTTTAAGAACTAAGGAGTCCATGTCAGCACCTCCAATGGTAAAATTCCTAGTTCTTAGTTCTTAACTCCAAAAT AAGAACTAAGAACCTTGCATTGGAGATGCTCTTATACACTGGTAGCTGAATCACATGTTTCTAGGACAAGCACAAGCTGA TTATAGTATTGAATTTTGGGTTGAAGTGCAATAAGAATTCTTGGAAAAAATTGTCTTGGCTAGCTCTAGTCATCACTAGG CCGGTGCCTCATAGCCAACAGCTCCGAATTCACCTATAAGTAGCTGATACAAACACTAGCTGCCAATTGCCACTCGAAAT TAATCAACTTTGCAATTATGGCTTGGGTATTTCCCCATTAAATATTGTGTTTCTTATTAATTATGGATATAACAGGAGAA TGTTGAGGAAGAAAGTAAAGTCATAGTTGCTGTGAGGCAAGGCAACATCATGGGGACTGCTTTTCATCCTGAATTGACTG CTGATACTCGGTGGTATATATAAGTTGATTTTGACTTTTGAATTTTACAGTTATATGGTATGATATGAAGTTCAAAAGAT TTGTTTTTGCAGGCACAGTTATTTCTTAAAGATGGCAAATGTAAGTGGAGAAGAGGCCTCAAGTAGTCTTGTTCCAGCAG AAGCCAGTACGAATGTGAACCAGCGGCCACTTAATGACCTTCCTATCTTTCAATCCTGAATTGACTGCTGATACTCGGTG GTATATATAAGTTGATTTTGACTTTTGAATTTTACAGTTATATGGTATGATATGAAGTTCAAAAGATTTGTTTTTACAGG CACAGTTATTTCTTAAAGATGGCAAATGTAAGTGGAGAAGAGGCCTCAAGTAATCTTGTTCCAGCAGAAGCCAGTACGAA TGTGAACCAGCGGCCACTTAATGACCTTCCTATCTTTCAATAGGACCAGCCATTCATCAAGACTAAAACAATTATGGATG ATTTTTTAATTAGTATAATTTATTTTGAAAACAATATCTCATAATTTCTGTGAGATCATAGAAGAAAGCTTAATAGTATT TTTATAAAAGATAATGTGTTTTAGACTTTGGTGTTTTGTGTAGTTTTCTATCTACTTGTAGCCTGTACTTTGGAAGGCGT TAAAATATATTCATTCTTGCATGGAAAATGCTCGCATCACTTTCTTTGACACTCTGTATTGGTCATAACCCATGTAGGAT CTACTAAATTATGAGTCACTTTTAATCAGGTAGGACCTACATAAATTTTAACCAATTAAAAAGAGTGTTAGAAATAGGCC CAGTTTGGAAGAGCTTATTTGAGCTTATCTG
CDS sequence (LotjaGi3g1v0210000.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCGTCGTTGGAGTCCTCGCGTTACAGGGATCTTTCCACGAACACATAGCAGCGCTGAGGAAGTTAGGAGTGAATGG GGTAGAGATTCGGAAGCCGGAGCAGCTTCTCAACGTGAATTCCCTCATCATCCCTGGTGGTGAGAGCACTGCCATGGCTA AGCTTGCTGAGTACCACAACTTGTTTCCCGCCTTGCGAGAGTTTGTGCAATTGGGAAAGCCTGTTTGGGGAACCTGTGCA GGGCTAATATTCTTGGCAAATAAAGCTGCAGGACAGAAGATTGGTGGTCAAGAACTGGTTGGTGGCCTTGACTGTACTGT GCATAGAAATTTCTTTGGCAGCCAGATTCAAAGCTTTGAGACAGAGCTTTCAGTTCCAGAGCTTGCATCCAAGGAAGGTG GCCCCGAAACGTTTCGTGGAATTTTTATTCGCGCCCCAGCAATTATTGAAGCTGGGCCAGATGTTCAAGTGCTGGCTGAC TATCCTGTACGTTCTAACAGATTGTCCACTGCTGATTCCCCTACTGAAGACAAAAAGGAGAATGTTGAGGAAGAAAGTAA AGTCATAGTTGCTGTGAGGCAAGGCAACATCATGGGGACTGCTTTTCATCCTGAATTGACTGCTGATACTCGGTGGCACA GTTATTTCTTAAAGATGGCAAATGTAAGTGGAGAAGAGGCCTCAAGTAGTCTTGTTCCAGCAGAAGCCAGTACGAATGTG AACCAGCGGCCACTTAATGACCTTCCTATCTTTCAATCCTGA
Protein sequence (LotjaGi3g1v0210000.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAVVGVLALQGSFHEHIAALRKLGVNGVEIRKPEQLLNVNSLIIPGGESTAMAKLAEYHNLFPALREFVQLGKPVWGTCA GLIFLANKAAGQKIGGQELVGGLDCTVHRNFFGSQIQSFETELSVPELASKEGGPETFRGIFIRAPAIIEAGPDVQVLAD YPVRSNRLSTADSPTEDKKENVEEESKVIVAVRQGNIMGTAFHPELTADTRWHSYFLKMANVSGEEASSSLVPAEASTNV NQRPLNDLPIFQS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 251 | 251 | 1.8E-114 | – | |
| Gene3D | 1 | 229 | 229 | 6.9E-80 | ||
| PANTHER | 1 | 251 | 251 | 1.8E-114 | ||
| PIRSF | 1 | 223 | 223 | 2.9E-77 | ||
| ProSiteProfiles | 3 | 221 | 219 | 66.592 | ||
| SUPERFAMILY | 3 | 219 | 217 | 7.1E-50 | ||
| CDD | 4 | 217 | 214 | 1.1215E-104 | ||
| Hamap | 4 | 219 | 216 | 34.956 | ||
| TIGRFAM | 4 | 161 | 158 | 2.5E-46 | ||
| Pfam | 6 | 219 | 214 | 1.2E-50 | ||
| ProSitePatterns | 41 | 51 | 11 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Glutaminase activity | Catalysis of the reaction: L-glutamine + H2O = L-glutamate + NH3. | ||
| Biological process | Vitamin B6 biosynthetic process | The chemical reactions and pathways resulting in the formation of any of the vitamin B6 compounds; pyridoxal, pyridoxamine and pyridoxine and the active form, pyridoxal phosphate. | ||
| Biological process | Pyridoxal phosphate biosynthetic process | The chemical reactions and pathways resulting in the formation of pyridoxal phosphate, pyridoxal phosphorylated at the hydroxymethyl group of C-5, the active form of vitamin B6. |
Expression pattern of LotjaGi3g1v0210000.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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