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Field | Value |
---|---|
Gene ID | LotjaGi4g1v0274500 |
Transcript ID | LotjaGi4g1v0274500.3 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Protein kinase; TAIR: AT5G15080.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q9LFP7|PIX7_ARATH Probable serine/threonine-protein kinase PIX7; TrEMBL-Plants: tr|A0A151SLT0|A0A151SLT0_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0274500 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:64416800..64420212) extracted from Lotus japonicus Gifu genome v1.2.
AGCAACCATGGTTAATCTCTTCTTCTCTCTTCTCTGCAACAGAGCATGAGTGAATGATTGAATGAATGAATGAAACTTTT TAGCAACCATCCAGCCATGGAGATAGAGCAGAAGAAGAAGAAGTGCGGGTGCTGGAGTGTCCTCAAACGTGGCGTTAGAG GTGCGTGCAAACCCTCAGATTCCAGAGACTCTGCTAACACTATCCCTCGTACTAGTCTCGTTCATGATGCAGGTACTTTT GTTTTGCTACTACAGAGTACAGATATATATACATAGTATAGCAGCCACTTTTTTCATGCTGCAAAATTCAGTTTTCCATT ACGTTTTTGTTTTCTTTCCTTTCTCATATTGAATCTCCAGGACCAGTGCAGTGCCTGAGTGTCAGAATCAGAAATGCTAC TATGTTTTTGTTACTTTCTTGTTTATGAGGCTGTTCATCTCTTCCTTCTCCTTCTCAAATCCTCTCTCTCTATCTATGAG CAACCATTTTGTGGAGTTTTGAAGTTTTTGATTCTGGGTTTTGCTTAAAATCATCAAATTTTAAGGGAAGTTTTTATTTT GGTTTGAGGGTGGTGGGTATTTTTTTTTAAGGAGTTCAATTATGATGTGGGTGGTTAAAAAGATGAATTTTTTTGGTGTG CTTTCTCTCTGTGCTTTCCCAGAACCCTTTTTCTATTTTCATGTTCTGTTAAAGCAGAGCTGACAGCATAATTCCTTTGA AAGAAAGCAACATAGAGCACGCTTGGAAACTAGTCCCTCTTGTAAAATTCTAAAGGATTTCAATTTTTCATTCTATTACA GAGGAATAAATTTTCTGATTTATTTAATTCTAGGGATTTTAAGTATTTTTCTTAGTTATCAATTTGCTCTAAATTGGGCT GCCAGAATTTGTAGTTGAAGTAGTCCGTTTGGATACGAGTTTATTGGAGCTTATCTAAAAGAAAATGCACTAAATAAGCT TCAATAAGTGCTATTTGTTTTTCATTCATATGCAATTATCATCTATCTATTTCTTGTGTAAGCCTTTTCACACATTCTTC ATGTTGATGCAGCAACTGAGACGCGGTACCTGAATGCTAGCAATCGAGAACTATTTCCTCCGAATGAAGCTCGACTATCT TCTGATAATCCTGATCCCGCTGCGGCTCAGGAGAACAAGGCTCCTTGCCAGCTCCTTCAATTTACATTTCAAGAACTAAA ATCAGCAACTGGAAATTTCAGACCAGATAGCATTCTTGGGGAGGGTGGCTTTGGCTATGTTTTCAAAGGATGGATTGAGG AAGATGGAACTGCCCCGGCGAAACCCGGGTCAGGGGTTACAGTGGCTGTCAAAAGCTTGAAGCCAGATGGTCTTCAGGGT CACAGAGAATGGGTGGTTAGTAAAAATATCTGGTTTGGGTTAGTAGATTGATATCATAAAAGATTGTCTAGGACATTATG GAGATTAGACTATAAATTGGAAATTTGTTTATGCAGGCTGAAGTTGACTTTCTTGGACAGCTTCACCATCCTAACCTTGT GAAACTTATCGGCTACTGCATTGAAGATGATCAGCGGCTTCTTGTTTACGAGTTTATGACCCGTGGCAGTCTAGAAAATC ATCTATTCAGAAGTGAGTTTTCCTTGAAGAGTCATATGGAATTTCATACTTAAGAGTTTATGTGAGAATGATTTGTAGGT TTCTAGTACAAATCATTTCTTGTTGCTTGAAGAATAAACCAAAACATGAATTGCTACCAAGTGATATGGTTTGGTTAATC TGTAACTTTATACGACAATCATTGTAGGATTCTTTCTTCATCCACATATGTTTTGTGTTGGTTTTACCCCTCTCTGGACT ATTCATTGGAGCAACTGATGATTGGTGTTGAATTCACAATTTCACATATAATTACTGCATTTACATACAACTTACAAATC AGCTACCTTAATGTGATGTCATTTAAGACCTTTGTCAGTTTATAATATAATGATATGTTTTGTTGGCTGTAGCAATGACT TAGGAAAAATTATACACTCTAAGGTTATCAGAAATCCTCTGTAGAATTACCAAATGAAATACCAAGTATTTGGAGGAAAT GATCAAGAATATTTGTATCCTATAAAACATATTCCAGTGTTCACTGGATGCATTGAGAAATTTGCAGAATCTTTTTTGCC CTTCTTTTCATGAGTTAGTTCTCTTTGTGAAACTTGTTCTTGATCACTTAATCACTTTTCCTTTTCACTCTTATTTTCCT TTTCCGTCTTCTACTTCCATATCCTTTATGAATTTGATAACTAGCTGTTCTGTTCTGGTCCCTATCCTTTTAATCTTTAA CCTACAATAAGTGCTGATTTTGCCTGCATTTTGAAGGAACCGTACCTCTTCCCTGGTCCAACAGGGTTAAGATTTCACTT GGTGCAGCAAAAGGATTGGCTTTCCTCCATAATGGTCCAGAACCAGTCATCTACAGAGATTTCAAAACATCAAACATTTT GCTTGATACGGTATGTGGTTAGTAATATCAGTTTCTAAGAAGAATTGATAACCCAAAAAAAAGGTTCTCTGAAATTTTCT TTCTTTCTTGTTTTTTTTTTCTTACCTTTGATAAGTTATTAATGTGGTGTTTTACAGGAGTATAATGCAAAGCTTTCAGA TTTTGGTCTAGCAAAAGCAGGCCCTCAGGGGGACAAAACACATGTTTCTACTAGAGTTGTTGGCACTTATGGTTATGCTG CTCCAGAATACGTCATGACAGGTATGAATTTTTTACTAAGTAGCTTGAAGCTCGAAAGGATTAGGAAACTCTAGCATCTA TAACCTCTAGAACTTCTATATTTTGTGCTAAGAAGTTGTATAATGGATTAGAATTCCTGCTACAAAGCAGAACATTATGC AAAAGCAGCACATGGCAATGTGTTATCATTCAGACTGATATAACTAATTGTATGGTTTTTTCTTTCTTTTTTTACCAGGA CACTTGACTTCAAAAAGTGATGTTTATAGCTTTGGAGTTGTGTTGCTTGAGATTTTAACAGGAAGAAGATCGATGGACAA GAAGCGCCCGAGTGGGGAACAAAGTCTTGTTTCATGGGCTAGGCCATATTTAGCAGACAAGCGAAAACTCTACCAACTCG TGGATCCTCGCTTGGAACTAAATTATTCTTTGAAAGGAGTGCAGAAAATTTCCCAGTTAGCTTATAGTTGCCTCAGTAGA GACCCCAAATGCCGTCCTAACATGGATGAAGTTGTGAAGGCTCTGACCCCATTGCAGGATCTTAACGACCTCGCAATCTT GTATCACTCTCGTTTATCACAGCAAGGGAGAAGAAAGAAGAAATCAGATGGAACTCCACATTTAACTTACACTCAGTCCA AGAGCATGAGGGCTTCTCCCTTGAATACCGGCAAGCAGCATCACCATCGATGA
CDS sequence (LotjaGi4g1v0274500.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGATAGAGCAGAAGAAGAAGAAGTGCGGGTGCTGGAGTGTCCTCAAACGTGGCGTTAGAGGTGCGTGCAAACCCTC AGATTCCAGAGACTCTGCTAACACTATCCCTCGTACTAGTCTCGTTCATGATGCAGCAACTGAGACGCGGTACCTGAATG CTAGCAATCGAGAACTATTTCCTCCGAATGAAGCTCGACTATCTTCTGATAATCCTGATCCCGCTGCGGCTCAGGAGAAC AAGGCTCCTTGCCAGCTCCTTCAATTTACATTTCAAGAACTAAAATCAGCAACTGGAAATTTCAGACCAGATAGCATTCT TGGGGAGGGTGGCTTTGGCTATGTTTTCAAAGGATGGATTGAGGAAGATGGAACTGCCCCGGCGAAACCCGGGTCAGGGG TTACAGTGGCTGTCAAAAGCTTGAAGCCAGATGGTCTTCAGGGTCACAGAGAATGGGTGGCTGAAGTTGACTTTCTTGGA CAGCTTCACCATCCTAACCTTGTGAAACTTATCGGCTACTGCATTGAAGATGATCAGCGGCTTCTTGTTTACGAGTTTAT GACCCGTGGCAGTCTAGAAAATCATCTATTCAGAAGAACCGTACCTCTTCCCTGGTCCAACAGGGTTAAGATTTCACTTG GTGCAGCAAAAGGATTGGCTTTCCTCCATAATGGTCCAGAACCAGTCATCTACAGAGATTTCAAAACATCAAACATTTTG CTTGATACGGAGTATAATGCAAAGCTTTCAGATTTTGGTCTAGCAAAAGCAGGCCCTCAGGGGGACAAAACACATGTTTC TACTAGAGTTGTTGGCACTTATGGTTATGCTGCTCCAGAATACGTCATGACAGGACACTTGACTTCAAAAAGTGATGTTT ATAGCTTTGGAGTTGTGTTGCTTGAGATTTTAACAGGAAGAAGATCGATGGACAAGAAGCGCCCGAGTGGGGAACAAAGT CTTGTTTCATGGGCTAGGCCATATTTAGCAGACAAGCGAAAACTCTACCAACTCGTGGATCCTCGCTTGGAACTAAATTA TTCTTTGAAAGGAGTGCAGAAAATTTCCCAGTTAGCTTATAGTTGCCTCAGTAGAGACCCCAAATGCCGTCCTAACATGG ATGAAGTTGTGAAGGCTCTGACCCCATTGCAGGATCTTAACGACCTCGCAATCTTGTATCACTCTCGTTTATCACAGCAA GGGAGAAGAAAGAAGAAATCAGATGGAACTCCACATTTAACTTACACTCAGTCCAAGAGCATGAGGGCTTCTCCCTTGAA TACCGGCAAGCAGCATCACCATCGATGA
Protein sequence (LotjaGi4g1v0274500.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEIEQKKKKCGCWSVLKRGVRGACKPSDSRDSANTIPRTSLVHDAATETRYLNASNRELFPPNEARLSSDNPDPAAAQEN KAPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEEDGTAPAKPGSGVTVAVKSLKPDGLQGHREWVAEVDFLG QLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTVPLPWSNRVKISLGAAKGLAFLHNGPEPVIYRDFKTSNIL LDTEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQS LVSWARPYLADKRKLYQLVDPRLELNYSLKGVQKISQLAYSCLSRDPKCRPNMDEVVKALTPLQDLNDLAILYHSRLSQQ GRRKKKSDGTPHLTYTQSKSMRASPLNTGKQHHHR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 16 | 413 | 398 | 1.1E-243 | – | |
PANTHER | 16 | 413 | 398 | 1.1E-243 | – | |
Gene3D | 75 | 186 | 112 | 7.6E-33 | – | |
SUPERFAMILY | 83 | 389 | 307 | 3.05E-81 | ||
ProSiteProfiles | 101 | 397 | 297 | 38.676 | ||
Pfam | 105 | 380 | 276 | 8.5E-49 | ||
CDD | 107 | 383 | 277 | 1.06018E-92 | – | |
ProSitePatterns | 107 | 139 | 33 | - | ||
Gene3D | 187 | 396 | 210 | 3.1E-61 | – | |
ProSitePatterns | 229 | 241 | 13 | - | ||
MobiDBLite | 397 | 435 | 39 | - | – | |
MobiDBLite | 411 | 427 | 17 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi4g1v0274500.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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