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LotjaGi4g1v0274500.3

Overview

Field Value
Gene ID LotjaGi4g1v0274500
Transcript ID LotjaGi4g1v0274500.3
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Protein kinase; TAIR: AT5G15080.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q9LFP7|PIX7_ARATH Probable serine/threonine-protein kinase PIX7; TrEMBL-Plants: tr|A0A151SLT0|A0A151SLT0_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0274500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:64416800..64420212) extracted from Lotus japonicus Gifu genome v1.2.

AGCAACCATGGTTAATCTCTTCTTCTCTCTTCTCTGCAACAGAGCATGAGTGAATGATTGAATGAATGAATGAAACTTTT TAGCAACCATCCAGCCATGGAGATAGAGCAGAAGAAGAAGAAGTGCGGGTGCTGGAGTGTCCTCAAACGTGGCGTTAGAG GTGCGTGCAAACCCTCAGATTCCAGAGACTCTGCTAACACTATCCCTCGTACTAGTCTCGTTCATGATGCAGGTACTTTT GTTTTGCTACTACAGAGTACAGATATATATACATAGTATAGCAGCCACTTTTTTCATGCTGCAAAATTCAGTTTTCCATT ACGTTTTTGTTTTCTTTCCTTTCTCATATTGAATCTCCAGGACCAGTGCAGTGCCTGAGTGTCAGAATCAGAAATGCTAC TATGTTTTTGTTACTTTCTTGTTTATGAGGCTGTTCATCTCTTCCTTCTCCTTCTCAAATCCTCTCTCTCTATCTATGAG CAACCATTTTGTGGAGTTTTGAAGTTTTTGATTCTGGGTTTTGCTTAAAATCATCAAATTTTAAGGGAAGTTTTTATTTT GGTTTGAGGGTGGTGGGTATTTTTTTTTAAGGAGTTCAATTATGATGTGGGTGGTTAAAAAGATGAATTTTTTTGGTGTG CTTTCTCTCTGTGCTTTCCCAGAACCCTTTTTCTATTTTCATGTTCTGTTAAAGCAGAGCTGACAGCATAATTCCTTTGA AAGAAAGCAACATAGAGCACGCTTGGAAACTAGTCCCTCTTGTAAAATTCTAAAGGATTTCAATTTTTCATTCTATTACA GAGGAATAAATTTTCTGATTTATTTAATTCTAGGGATTTTAAGTATTTTTCTTAGTTATCAATTTGCTCTAAATTGGGCT GCCAGAATTTGTAGTTGAAGTAGTCCGTTTGGATACGAGTTTATTGGAGCTTATCTAAAAGAAAATGCACTAAATAAGCT TCAATAAGTGCTATTTGTTTTTCATTCATATGCAATTATCATCTATCTATTTCTTGTGTAAGCCTTTTCACACATTCTTC ATGTTGATGCAGCAACTGAGACGCGGTACCTGAATGCTAGCAATCGAGAACTATTTCCTCCGAATGAAGCTCGACTATCT TCTGATAATCCTGATCCCGCTGCGGCTCAGGAGAACAAGGCTCCTTGCCAGCTCCTTCAATTTACATTTCAAGAACTAAA ATCAGCAACTGGAAATTTCAGACCAGATAGCATTCTTGGGGAGGGTGGCTTTGGCTATGTTTTCAAAGGATGGATTGAGG AAGATGGAACTGCCCCGGCGAAACCCGGGTCAGGGGTTACAGTGGCTGTCAAAAGCTTGAAGCCAGATGGTCTTCAGGGT CACAGAGAATGGGTGGTTAGTAAAAATATCTGGTTTGGGTTAGTAGATTGATATCATAAAAGATTGTCTAGGACATTATG GAGATTAGACTATAAATTGGAAATTTGTTTATGCAGGCTGAAGTTGACTTTCTTGGACAGCTTCACCATCCTAACCTTGT GAAACTTATCGGCTACTGCATTGAAGATGATCAGCGGCTTCTTGTTTACGAGTTTATGACCCGTGGCAGTCTAGAAAATC ATCTATTCAGAAGTGAGTTTTCCTTGAAGAGTCATATGGAATTTCATACTTAAGAGTTTATGTGAGAATGATTTGTAGGT TTCTAGTACAAATCATTTCTTGTTGCTTGAAGAATAAACCAAAACATGAATTGCTACCAAGTGATATGGTTTGGTTAATC TGTAACTTTATACGACAATCATTGTAGGATTCTTTCTTCATCCACATATGTTTTGTGTTGGTTTTACCCCTCTCTGGACT ATTCATTGGAGCAACTGATGATTGGTGTTGAATTCACAATTTCACATATAATTACTGCATTTACATACAACTTACAAATC AGCTACCTTAATGTGATGTCATTTAAGACCTTTGTCAGTTTATAATATAATGATATGTTTTGTTGGCTGTAGCAATGACT TAGGAAAAATTATACACTCTAAGGTTATCAGAAATCCTCTGTAGAATTACCAAATGAAATACCAAGTATTTGGAGGAAAT GATCAAGAATATTTGTATCCTATAAAACATATTCCAGTGTTCACTGGATGCATTGAGAAATTTGCAGAATCTTTTTTGCC CTTCTTTTCATGAGTTAGTTCTCTTTGTGAAACTTGTTCTTGATCACTTAATCACTTTTCCTTTTCACTCTTATTTTCCT TTTCCGTCTTCTACTTCCATATCCTTTATGAATTTGATAACTAGCTGTTCTGTTCTGGTCCCTATCCTTTTAATCTTTAA CCTACAATAAGTGCTGATTTTGCCTGCATTTTGAAGGAACCGTACCTCTTCCCTGGTCCAACAGGGTTAAGATTTCACTT GGTGCAGCAAAAGGATTGGCTTTCCTCCATAATGGTCCAGAACCAGTCATCTACAGAGATTTCAAAACATCAAACATTTT GCTTGATACGGTATGTGGTTAGTAATATCAGTTTCTAAGAAGAATTGATAACCCAAAAAAAAGGTTCTCTGAAATTTTCT TTCTTTCTTGTTTTTTTTTTCTTACCTTTGATAAGTTATTAATGTGGTGTTTTACAGGAGTATAATGCAAAGCTTTCAGA TTTTGGTCTAGCAAAAGCAGGCCCTCAGGGGGACAAAACACATGTTTCTACTAGAGTTGTTGGCACTTATGGTTATGCTG CTCCAGAATACGTCATGACAGGTATGAATTTTTTACTAAGTAGCTTGAAGCTCGAAAGGATTAGGAAACTCTAGCATCTA TAACCTCTAGAACTTCTATATTTTGTGCTAAGAAGTTGTATAATGGATTAGAATTCCTGCTACAAAGCAGAACATTATGC AAAAGCAGCACATGGCAATGTGTTATCATTCAGACTGATATAACTAATTGTATGGTTTTTTCTTTCTTTTTTTACCAGGA CACTTGACTTCAAAAAGTGATGTTTATAGCTTTGGAGTTGTGTTGCTTGAGATTTTAACAGGAAGAAGATCGATGGACAA GAAGCGCCCGAGTGGGGAACAAAGTCTTGTTTCATGGGCTAGGCCATATTTAGCAGACAAGCGAAAACTCTACCAACTCG TGGATCCTCGCTTGGAACTAAATTATTCTTTGAAAGGAGTGCAGAAAATTTCCCAGTTAGCTTATAGTTGCCTCAGTAGA GACCCCAAATGCCGTCCTAACATGGATGAAGTTGTGAAGGCTCTGACCCCATTGCAGGATCTTAACGACCTCGCAATCTT GTATCACTCTCGTTTATCACAGCAAGGGAGAAGAAAGAAGAAATCAGATGGAACTCCACATTTAACTTACACTCAGTCCA AGAGCATGAGGGCTTCTCCCTTGAATACCGGCAAGCAGCATCACCATCGATGA
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0274500.3) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAGATAGAGCAGAAGAAGAAGAAGTGCGGGTGCTGGAGTGTCCTCAAACGTGGCGTTAGAGGTGCGTGCAAACCCTC AGATTCCAGAGACTCTGCTAACACTATCCCTCGTACTAGTCTCGTTCATGATGCAGCAACTGAGACGCGGTACCTGAATG CTAGCAATCGAGAACTATTTCCTCCGAATGAAGCTCGACTATCTTCTGATAATCCTGATCCCGCTGCGGCTCAGGAGAAC AAGGCTCCTTGCCAGCTCCTTCAATTTACATTTCAAGAACTAAAATCAGCAACTGGAAATTTCAGACCAGATAGCATTCT TGGGGAGGGTGGCTTTGGCTATGTTTTCAAAGGATGGATTGAGGAAGATGGAACTGCCCCGGCGAAACCCGGGTCAGGGG TTACAGTGGCTGTCAAAAGCTTGAAGCCAGATGGTCTTCAGGGTCACAGAGAATGGGTGGCTGAAGTTGACTTTCTTGGA CAGCTTCACCATCCTAACCTTGTGAAACTTATCGGCTACTGCATTGAAGATGATCAGCGGCTTCTTGTTTACGAGTTTAT GACCCGTGGCAGTCTAGAAAATCATCTATTCAGAAGAACCGTACCTCTTCCCTGGTCCAACAGGGTTAAGATTTCACTTG GTGCAGCAAAAGGATTGGCTTTCCTCCATAATGGTCCAGAACCAGTCATCTACAGAGATTTCAAAACATCAAACATTTTG CTTGATACGGAGTATAATGCAAAGCTTTCAGATTTTGGTCTAGCAAAAGCAGGCCCTCAGGGGGACAAAACACATGTTTC TACTAGAGTTGTTGGCACTTATGGTTATGCTGCTCCAGAATACGTCATGACAGGACACTTGACTTCAAAAAGTGATGTTT ATAGCTTTGGAGTTGTGTTGCTTGAGATTTTAACAGGAAGAAGATCGATGGACAAGAAGCGCCCGAGTGGGGAACAAAGT CTTGTTTCATGGGCTAGGCCATATTTAGCAGACAAGCGAAAACTCTACCAACTCGTGGATCCTCGCTTGGAACTAAATTA TTCTTTGAAAGGAGTGCAGAAAATTTCCCAGTTAGCTTATAGTTGCCTCAGTAGAGACCCCAAATGCCGTCCTAACATGG ATGAAGTTGTGAAGGCTCTGACCCCATTGCAGGATCTTAACGACCTCGCAATCTTGTATCACTCTCGTTTATCACAGCAA GGGAGAAGAAAGAAGAAATCAGATGGAACTCCACATTTAACTTACACTCAGTCCAAGAGCATGAGGGCTTCTCCCTTGAA TACCGGCAAGCAGCATCACCATCGATGA
Download CDS Sequence

Protein sequence (LotjaGi4g1v0274500.3) extracted from Lotus japonicus Gifu v1.2 Proteins.

MEIEQKKKKCGCWSVLKRGVRGACKPSDSRDSANTIPRTSLVHDAATETRYLNASNRELFPPNEARLSSDNPDPAAAQEN KAPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEEDGTAPAKPGSGVTVAVKSLKPDGLQGHREWVAEVDFLG QLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTVPLPWSNRVKISLGAAKGLAFLHNGPEPVIYRDFKTSNIL LDTEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQS LVSWARPYLADKRKLYQLVDPRLELNYSLKGVQKISQLAYSCLSRDPKCRPNMDEVVKALTPLQDLNDLAILYHSRLSQQ GRRKKKSDGTPHLTYTQSKSMRASPLNTGKQHHHR
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR45621:SF116
16 413 398 1.1E-243 –
PANTHER
PTHR45621
16 413 398 1.1E-243 –
Gene3D
G3DSA:3.30.200.20
75 186 112 7.6E-33 –
SUPERFAMILY
SSF56112
83 389 307 3.05E-81
IPR011009
ProSiteProfiles
PS50011
101 397 297 38.676
IPR000719
Pfam
PF07714
105 380 276 8.5E-49
IPR001245
CDD
cd14066
107 383 277 1.06018E-92 –
ProSitePatterns
PS00107
107 139 33 -
IPR017441
Gene3D
G3DSA:1.10.510.10
187 396 210 3.1E-61 –
ProSitePatterns
PS00108
229 241 13 -
IPR008271
MobiDBLite
mobidb-lite
397 435 39 - –
MobiDBLite
mobidb-lite
411 427 17 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0274500.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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