Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0305100 |
| Transcript ID | LotjaGi4g1v0305100.4 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Subtilisin-like protease; TAIR: AT4G30020.1 PA-domain containing subtilase family protein; Swiss-Prot: sp|Q9SZV5|SBT26_ARATH Subtilisin-like protease SBT2.6; TrEMBL-Plants: tr|A0A151SRS2|A0A151SRS2_CAJCA Subtilisin-like protease; Found in the gene: LotjaGi4g1v0305100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:68082595..68087637) extracted from Lotus japonicus Gifu genome v1.2.
ATGAGATTGGTGGAGTTTGGTTGTGTTTTGATTGTTCTGTCTCTTCTTCTGGTTTCTGGGAGCGCTGAGGTTTACATAGT AACTGTTGAAGGTGAGCCTATCATCAGTTACCGTGGAGGAATTGATGGGTTTGAAGCTACTGCTGTGGAATCTGATGAGA AGATTGACACCACAAGGTACTTGAAAGCAATGTTCCTTTCATTGGCAAGTGTTGTTGCTCACATTTTGGGTGTGTTTGGG TAAATAGCTTAATTAAGCGCTTATTGAACTAATAAGCGCGCTTATTCGATAAGCGCTTCTTCATAAGTTAATTTGATAAA CTTATTGAAATAAGCTGAAAATAAGTTATGAATAAGCACAAGTTCTTATTTATAAGCTAATCTGAACATCTTATGAAAAT AGCTCAAAACAGCTTATATGTAAGCCATAAGCTATTTACATAAGCTCTCCGAATACTTGTATAAGTGCTTATGGTATAAG ATAAGCTGAAATAAAGTCTTCCAAACAGGAACCTTATCTTACTTTAAATTTTTTCCAGTGAATTGGTTACTTCTTATGCT CGTCATCTTGAAAAGAGACATGACATGATTCTGGGGATGCTGTTTGAGCAAGAGACATACAAGAAGCTCTACAGCTATAA ACATCTTATAAATGGGTTTGCTGTTCATATTTCCCCAGAACAGGTAATGTTTTCCATTTTCTTTTTACTATTGCATAGTT AACAATAAACTTCACTCTGATTTCCTTAAGCTTTACCCTTTTATTAGTAGGCAGAAACTCTAAGACGTGCTCCTGGAGTG AAATCTGTTGAGAGGGACTGGAAAGTGAGAAAACTGACGACACATACCCCGCAATTTTTAGGCCTTCCAACCGGGGTATG GCCGACAGGAGGCGGCTTTGATCGGGCTGGAGAAGACATTGTGATAGGATTTGTGGACTCAGGGATCTATCCCCACCACC CCAGCTTTGCGACTCATAATACCGAACCGTATGAGCCGGTTTTGAAGTATAGAGGAAAATGCGAAGTTGATCCGGATACT AAAAGAAATTACTGTAATGGGAAGATTGTCGGAGCACAACACTTTGCTCAAGCTGCAATAGCTGCTGGGGCATTTAACCC TTCAATTGATTTTGCATCTCCTTTGGATGGGGATGGACACGGAAGGTTCGGCCCCGCCACTTCTTTGTTTACTACCTTTT CTCCCTTGAGTTCTTTACTTATCTCCTTGCCTATAAGATTGTTAGAGAATATGATGTGAATTGTGACATTTCCTGCTTAT TAGCATATCATGAGAACTTAAGTAAGAGTAGTTCTTCTTCTTATGTCTTCTAAGAATTTGAACTTAATAGTATAAGCACT CACGGAGTCATGCTTAAGGTAATCTAATTGGATATAAATTTTTAACAATCCCTTTGTTTTCCTCGCATCATCTTGCAGTC ACACAGCCTCTATTGCAGCTGGAAATAATGGAATCCCTGTAAGATTTCATGGCCATGAATTTGGGAAAGCAAGTGGGATG GCTCCTCGTGCCAGGTGAGGAGTAGTTCCCTTAATTGTTCCAAAACTGCAAATTACATTCCTTTCTGTAGTAATAGTGTA TGTTTGGTCTAACTCAAAAACTCAGTTACCATCAGTTAGCATCCATTGGAATGACAAATCTCACTTTCCAATGACAAAAA CGTCAAAGGAAGAAATGGAAGCGTTTCCGTTGAGCGGAACATAACAATAAACCAAACACAGCCTTAGTCATTTTGGTGTA TTTGTCTACAGGATTGCTGTGTACAAGGCCCTCTATAGACTGTTTGGAGGGTTTATTGCCGATGTAGTTGCTGCAATTGA TCAGGTATACTAGTATATCATATATTTATACACTAACTCAAAAAAACACATTAAGTAGACCCCAGCCTCCCATGTACACA CAAATCACTTGCTTTCTTTCCTAGCTAATATGTTCACACTGGAATACTAGATACCTTGTGAAAGGATGTTATTGCTGCAT TTTTTTTCTGTAAATCTCAACAATCAACATAAATTCTAACAATTAATTATACTATCTCATTTTTTACTACAAGTATTCTG TCTCGAAATTTCTAATCTAAGTTTCAACAGGCTGTATATGATGGAGTGGATATACTCAGCCTTTCAGTTGGACCCAACAG TCCTCCAACAGCCACAAAAACTACATTTTTGAACCCTTTTGATGCTACACTTCTTGGAGCTGTGAAAGCTGGTGTATTTG TTGCACAGGCTGCTGGAAATGGCGGTCCATTTCCTAAGACAATGGTTTCATATAGTCCATGGATAACATCTGTAGCAGCT GCAATTGATGATCGTAGATATAAAAACCATTTGACCCTTGGGAATGGAAAAATCTTAGCTGGAATCGGGTTATCACGTGA GTTTTGCAACTTCCTACAGTTATGTTTTTCTTTTTGCTGGACCGGCATTGGGAACTCTAATGTGGAAGAATTTGGTGGGA ATTTTCATTGTAGTTTATGAGACACAAAATTAACTTTCATCCTTATAGGGGAAAAATAAAATGAAAACAAAACCACATAT TTCAACTTTCAAGTAGAAGTCTCTTTTGAGTCACTTCTTCACTTAATTGATTACTTGGACTTTGTTTTATCATGATCCAC TACAAGAAAGAACCAAAAAAGGAGAAATTTTTGCTAAAACCTCCCTTATTTTCTTTATATACTCACTGCTCAGTGAATAT TACTAAAATATCCATAATGGCTTGTACAGCTTCTACACATTTAAACCAAACATACAAGTTGGTTGCTGCAAATGATGTGC TGCTAGATTCTTCACTTATTAAGTACAGCCCCACAGATTGCCAGAGACCAGAAGTTTTAAACAAGAAATTGATAGAGGGA AATATTCTTCTCTGTGGATATTCTTTCAACTTTGTTGTTGGTACTGCATCAATCAAGAAAGTCTCAGAAACAGCAAAGAC CCTTGGGGCTGCTGGATTTGTTCTCTGTGTTGAAAACGTTTCCCCGGGAACTAAATTTGATCCTGTTCCTGTTGGCCTTC CCGGAATTCTTATCATAGATGTCAGCAATTCGCAGGTTCTTAGACTCATCTATACTGCTATATTTATGTTGTGGTAGATT GAGTTTCACTACAGCTAAACTTTTTTCTCTTTGGCCGATAACTTATTCCACAATCAACTACTTATTTGCTATCATTGTTG TTTCTCTCCGTGTTCTACCTTTTCATAATTATTTTTCTTTTTATGATCACAAATATGCTCTATAGATCATGTCATTTACT ACTTGCATATTATTTTTTCAGGAACTTGTAGATTATTATAATATCTCTACACCAAGAGACTGGACTGGACGGGTGAAGAG TTTCATAGGTACAGGTAAAATTGGCGACGGCTTGATGCCTATCCTTCATAAATCTGCACCACAGGTGGCATTGTTCTCCG CTAGAGGGCCAAATATAAAGGACTTCAGCTTCCAAGAGGCAGATCTTCTCAAACCCGATATATTAGCTCCTGGTTCATTG ATTTGGGGTGCTTGGTCTCTAAATGGAACTGATGAGCCAAATTATGTTGGTAAGTAATGACTTGACTAAATGATCTCTTC TTTGTAATTGAAAAATTCAACCAACATTTTCAAATTTCTCATTGCAAAAAATCTCTGAACCTTCAAATTTGTTCATAGGA GCAAGTGATTGGATGATATGCTGCATTGCTACTTTAAGACGGATTTTTTTCCTTTTTTTGTTGCTTTTTTTCTTTTGTTC ATGTGGAAATACATTAATACAAGAAATTATCAACACCTGAGACAAAAGATAACCAACTTGACAGGAGACATCTTTCTGGC AGACAACAGAGTACATGATTTTATAGAATTGATTTATTTTAAGCAATTTTTTTTGCTTGTTCAGGTGAGGGTTTTGCCAT GATATCTGGAACTAGCATGTCCGCACCACATATAGCTGGAATTGCTGCTCTTATAAAGCAGAAACATCCACAATGGAGCC CTGCCGCCATTAAATCAGCCTTGATGACAACATCAACAACTCTAGACAGAGCAGGGAATCCTCTTCTAGCCCAGAAAACT TCTGAAACAGAAGCTATGAAGCTGGTCAAAGCCACTCCTTTTGATTATGGGAGTGGGCATGTTGATCCAAGAGCTGCCTT GGATCCTGGTCTCATCTTTGATGCAGGTTTGATCTTTCTCTTCTCTGTTATTGTTTTTTTTTTTGTCTTGGAGCTTTTAA ATTCACAATTAACTTGAAAGCTAATATTCACCCCAAGTTCAGAATCCCGGTAAAACTCATCAACTTCTCTGAATCTATTT TTGGCGGGTTGGTGACATGAGAAGTTCACTGGAAAATAAATTCTGTAAAATAAAAATGTGGTTGAAAACCTATGGGAACT AGAATGCAACTGGTGATTCTTGATCAAACTAATAGCAAACTTTGATTGAAATGTATTTAATATCCATTCTTAAATATGGT GATTTTCTGGCTTCTGTTTCCTGCTATTTAAACAAGGGTGCCTAAAACAACTTTCAGTTCTAAAACAAAGGTGCAAACCA AAGCATAGTAATAGTGATAATAACAACAGTAACAATCATAAGTTTTGCTTCATCAATTCTGCTGTTCATTTTGCAGGATA CGAGGATTATCTCGGCTTCTTATGCACAACACCAGGCATTGACGTTCATGAGATAAAGAACTACACTCATGTGCCATGCA ACACTACCATGGGTAAACCATCAAATTTAAACACCCCTTCTATCACAATTTCCCATCTTGCGGAACCTCAAGTTGTCACC CGCACGGTCACGAATGTTGCTGAGGAAGAAACCTACGTGATCACAGCCAGAATGGAACCAGCTGTTGCCATTGAAGTCAA CCCTCCTGCAATGACTATCAGAGCAGGTGCATCGCGTAAGTTTTCTGTGACACTCACGGCTCGATCAGTTACAGGAAGCT ATAGTTTTGGCGAGGTTGTAATGAAAGGGAGTAGAGGGCATAAGGTGAGGATACCTGTTGTGGCCAAAGGATGCCCCCGG TAG
CDS sequence (LotjaGi4g1v0305100.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGATTGGTGGAGTTTGGTTGTGTTTTGATTGTTCTGTCTCTTCTTCTGGTTTCTGGGAGCGCTGAGGTTTACATAGT AACTGTTGAAGGTGAGCCTATCATCAGTTACCGTGGAGGAATTGATGGGTTTGAAGCTACTGCTGTGGAATCTGATGAGA AGATTGACACCACAAGTGAATTGGTTACTTCTTATGCTCGTCATCTTGAAAAGAGACATGACATGATTCTGGGGATGCTG TTTGAGCAAGAGACATACAAGAAGCTCTACAGCTATAAACATCTTATAAATGGGTTTGCTGTTCATATTTCCCCAGAACA GGCAGAAACTCTAAGACGTGCTCCTGGAGTGAAATCTGTTGAGAGGGACTGGAAAGTGAGAAAACTGACGACACATACCC CGCAATTTTTAGGCCTTCCAACCGGGGTATGGCCGACAGGAGGCGGCTTTGATCGGGCTGGAGAAGACATTGTGATAGGA TTTGTGGACTCAGGGATCTATCCCCACCACCCCAGCTTTGCGACTCATAATACCGAACCGTATGAGCCGGTTTTGAAGTA TAGAGGAAAATGCGAAGTTGATCCGGATACTAAAAGAAATTACTGTAATGGGAAGATTGTCGGAGCACAACACTTTGCTC AAGCTGCAATAGCTGCTGGGGCATTTAACCCTTCAATTGATTTTGCATCTCCTTTGGATGGGGATGGACACGGAAGTCAC ACAGCCTCTATTGCAGCTGGAAATAATGGAATCCCTGTAAGATTTCATGGCCATGAATTTGGGAAAGCAAGTGGGATGGC TCCTCGTGCCAGGATTGCTGTGTACAAGGCCCTCTATAGACTGTTTGGAGGGTTTATTGCCGATGTAGTTGCTGCAATTG ATCAGGCTGTATATGATGGAGTGGATATACTCAGCCTTTCAGTTGGACCCAACAGTCCTCCAACAGCCACAAAAACTACA TTTTTGAACCCTTTTGATGCTACACTTCTTGGAGCTGTGAAAGCTGGTGTATTTGTTGCACAGGCTGCTGGAAATGGCGG TCCATTTCCTAAGACAATGGTTTCATATAGTCCATGGATAACATCTGTAGCAGCTGCAATTGATGATCGTAGATATAAAA ACCATTTGACCCTTGGGAATGGAAAAATCTTAGCTGGAATCGGGTTATCACCTTCTACACATTTAAACCAAACATACAAG TTGGTTGCTGCAAATGATGTGCTGCTAGATTCTTCACTTATTAAGTACAGCCCCACAGATTGCCAGAGACCAGAAGTTTT AAACAAGAAATTGATAGAGGGAAATATTCTTCTCTGTGGATATTCTTTCAACTTTGTTGTTGGTACTGCATCAATCAAGA AAGTCTCAGAAACAGCAAAGACCCTTGGGGCTGCTGGATTTGTTCTCTGTGTTGAAAACGTTTCCCCGGGAACTAAATTT GATCCTGTTCCTGTTGGCCTTCCCGGAATTCTTATCATAGATGTCAGCAATTCGCAGGAACTTGTAGATTATTATAATAT CTCTACACCAAGAGACTGGACTGGACGGGTGAAGAGTTTCATAGGTACAGGTAAAATTGGCGACGGCTTGATGCCTATCC TTCATAAATCTGCACCACAGGTGGCATTGTTCTCCGCTAGAGGGCCAAATATAAAGGACTTCAGCTTCCAAGAGGCAGAT CTTCTCAAACCCGATATATTAGCTCCTGGTTCATTGATTTGGGGTGCTTGGTCTCTAAATGGAACTGATGAGCCAAATTA TGTTGGTGAGGGTTTTGCCATGATATCTGGAACTAGCATGTCCGCACCACATATAGCTGGAATTGCTGCTCTTATAAAGC AGAAACATCCACAATGGAGCCCTGCCGCCATTAAATCAGCCTTGATGACAACATCAACAACTCTAGACAGAGCAGGGAAT CCTCTTCTAGCCCAGAAAACTTCTGAAACAGAAGCTATGAAGCTGGTCAAAGCCACTCCTTTTGATTATGGGAGTGGGCA TGTTGATCCAAGAGCTGCCTTGGATCCTGGTCTCATCTTTGATGCAGGATACGAGGATTATCTCGGCTTCTTATGCACAA CACCAGGCATTGACGTTCATGAGATAAAGAACTACACTCATGTGCCATGCAACACTACCATGGGTAAACCATCAAATTTA AACACCCCTTCTATCACAATTTCCCATCTTGCGGAACCTCAAGTTGTCACCCGCACGGTCACGAATGTTGCTGAGGAAGA AACCTACGTGATCACAGCCAGAATGGAACCAGCTGTTGCCATTGAAGTCAACCCTCCTGCAATGACTATCAGAGCAGGTG CATCGCGTAAGTTTTCTGTGACACTCACGGCTCGATCAGTTACAGGAAGCTATAGTTTTGGCGAGGTTGTAATGAAAGGG AGTAGAGGGCATAAGGTGAGGATACCTGTTGTGGCCAAAGGATGCCCCCGGTAG
Protein sequence (LotjaGi4g1v0305100.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRLVEFGCVLIVLSLLLVSGSAEVYIVTVEGEPIISYRGGIDGFEATAVESDEKIDTTSELVTSYARHLEKRHDMILGML FEQETYKKLYSYKHLINGFAVHISPEQAETLRRAPGVKSVERDWKVRKLTTHTPQFLGLPTGVWPTGGGFDRAGEDIVIG FVDSGIYPHHPSFATHNTEPYEPVLKYRGKCEVDPDTKRNYCNGKIVGAQHFAQAAIAAGAFNPSIDFASPLDGDGHGSH TASIAAGNNGIPVRFHGHEFGKASGMAPRARIAVYKALYRLFGGFIADVVAAIDQAVYDGVDILSLSVGPNSPPTATKTT FLNPFDATLLGAVKAGVFVAQAAGNGGPFPKTMVSYSPWITSVAAAIDDRRYKNHLTLGNGKILAGIGLSPSTHLNQTYK LVAANDVLLDSSLIKYSPTDCQRPEVLNKKLIEGNILLCGYSFNFVVGTASIKKVSETAKTLGAAGFVLCVENVSPGTKF DPVPVGLPGILIIDVSNSQELVDYYNISTPRDWTGRVKSFIGTGKIGDGLMPILHKSAPQVALFSARGPNIKDFSFQEAD LLKPDILAPGSLIWGAWSLNGTDEPNYVGEGFAMISGTSMSAPHIAGIAALIKQKHPQWSPAAIKSALMTTSTTLDRAGN PLLAQKTSETEAMKLVKATPFDYGSGHVDPRAALDPGLIFDAGYEDYLGFLCTTPGIDVHEIKNYTHVPCNTTMGKPSNL NTPSITISHLAEPQVVTRTVTNVAEEETYVITARMEPAVAIEVNPPAMTIRAGASRKFSVTLTARSVTGSYSFGEVVMKG SRGHKVRIPVVAKGCPR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 5 | 5 | - | – | |
| Phobius | 1 | 22 | 22 | - | – | |
| SignalP_EUK | 1 | 22 | 22 | - | – | |
| Phobius | 6 | 17 | 12 | - | – | |
| TMHMM | 7 | 29 | 23 | - | – | |
| PANTHER | 7 | 813 | 807 | 0.0 | – | |
| PANTHER | 7 | 813 | 807 | 0.0 | – | |
| Phobius | 18 | 22 | 5 | - | – | |
| Phobius | 23 | 817 | 795 | - | – | |
| Pfam | 24 | 127 | 104 | 4.1E-20 | ||
| Gene3D | 55 | 129 | 75 | 1.2E-7 | ||
| SUPERFAMILY | 86 | 127 | 42 | 3.17E-6 | – | |
| ProSiteProfiles | 123 | 674 | 552 | 27.409 | – | |
| SUPERFAMILY | 129 | 678 | 550 | 1.44E-73 | ||
| CDD | 130 | 633 | 504 | 5.52439E-122 | ||
| PRINTS | 154 | 173 | 20 | 1.3E-16 | ||
| Pfam | 154 | 664 | 511 | 3.9E-47 | ||
| Gene3D | 156 | 688 | 533 | 6.5E-143 | ||
| ProSitePatterns | 159 | 170 | 12 | - | ||
| PRINTS | 233 | 246 | 14 | 1.3E-16 | ||
| Gene3D | 369 | 534 | 166 | 6.5E-143 | – | |
| CDD | 376 | 514 | 139 | 5.88146E-13 | – | |
| PRINTS | 596 | 612 | 17 | 1.3E-16 | ||
| ProSitePatterns | 597 | 607 | 11 | - | ||
| Gene3D | 691 | 814 | 124 | 4.3E-16 | – | |
| Pfam | 719 | 811 | 93 | 1.9E-16 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Serine-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
Expression pattern of LotjaGi4g1v0305100.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…