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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0393900 |
| Transcript ID | LotjaGi4g1v0393900.3 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Plasma membrane ATPase; TAIR: AT1G10130.1 endoplasmic reticulum-type calcium-transporting ATPase 3; Swiss-Prot: sp|P22036|ATMB_SALTY Magnesium-transporting ATPase, P-type 1; TrEMBL-Plants: tr|A0A0R0JX32|A0A0R0JX32_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0393900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:77223131..77227958) extracted from Lotus japonicus Gifu genome v1.2.
GTCTTAGGATTTCTGCGGCGCCTCATCTATGAAAGTATGCTTCAGAACCATAGCTTCTCTTTTCTACCCTCTTTCCTTCC ATTTTCTCCCTCTTATGTACTTCTCTCCAGATAGAAGTGTGTGTTTGCATAACTGGTGAATGTAACGTGAACGAACTTTC ATCTCAATACATAAGAAGAATATCGTTTATTTATTTATCTCGTAACTGTTTTCATTGCTTTCAACGGGTATCCAAACATA TATTTAGCAGTTACTATCATAGTATGTTTTTTTTATGTGGGTTGAGCTCAATTGCAGGGAAACCTGATGGGGGCTCACGA ACTGAAGAGGAAGAGAAAGTCTACTCTTGGCTATATACCTTGGCCCAGTCTGACAAAAACTTGGTCTTTGAGTATGTTAG GTCCACAGAAAGAGGCAAGTTTCTGTATTCTGCAGTACTTTTACAATTACACATTGATACCTTTCAAAATTTATGGACAC AAAATGTGGTCCTAAACGCATGTTTCATGTGCTACTGGCACTAAAAGCAAATGAATTTGAATCCTCTCTTGTGACACTAC ATTGTCACGATTAATAGCATGTTACGTTTGTTTCCACTGTGAAATTCTGTAGAATCAATTCTTGTTAGAAACAAGTCTTA ACGTGAGTTAACGTGTCTTCAATTATGTGCAATTCGTGAAGCCAAACATGTTATAAGATTGTGTATCTTTCTCTGTTAAC AATGTTCTTCAATTTCTGTGTAGGCTTAACATTCACTGAAGCTGAGAGCAGGCTGCAAGAAAATGGTCCAAACGTTCCAT TTGATTATTCTTTTCCAAGCTGGTGGCATTTTCTATGGAAAGCTCTTTTCCACGCTTTCAACATGATTCTCATTGTTTTA TCTGCTCTGTCATTCATCACCTGTGACTATCCAAATGGATCCATCATGCTCATATTGGTTTTCATCAGTGTCTCCCTCCG TTTCTATCAGGTATGACTATGAATTTCTACATTACTTGGTTCAATTGAATGAAGAAATATTTCTCTTCCCTTTCCCTCCT CTTATCTTGCACCTTTACCGTGGTTCATAGGAATATAGCAGCTCGAAAGCAGCTAAGAGGCTTTCAGAATTTTTGAGATG CCCGGTGCGAGTTCAAAGATGTGCCGGTAGAGTTGTGCAGACAGAATTGAAGGTTCAAGTTGATCACAGGGATGTAGTTC CTGGTGACATTGTGATTTTTGAACCTGGGGACCTCTTTCCAGGGGATATCAGATTGTTATCTTCAACACATCTTGTTGTA AGGTATGTCAACTGAAAATCTGGTGGTTTTATTGATGATTTGAATATCAGATGGTGATTTGATACCTTTTTAACAGCCAG GCCTCATTAACTGGGGAGTCTTGGACAACGGAAAAAACTGCTGATGTTAGAGAAGATCACAGCACACCTTTACTAGATTT AAAGAACATCTGCTTTATGGTTAGTAATTCAAACCCCCTTCCTTGTTTTGTTTCAATGGAATAAGGTTTCAAATTGGAGT CGCGGCCGTGAATCTTGATACTGTGGAAAATTAAGGACACATGAGGCTGATGCGACTACCATCGCGATGCAGTCATGGAG ACAGTTAGGATTCAATTGCAAGATTTGTAACTTGAGTCCCACATTGGAAGTATGACATTCTAATGTGGGGTTTACAAGCC TTGGGCTCTCCAACAGTTGGCTTTTGTGGTATGGTTCTCGCCTTCTCGGAAGGTTTTTATCAATTGATATCGGTGCCTTC CACCATGTCTCTCGGCTGCAAACGAGCAGTGCGGGTGGTGATGTCTGCATTGCGGCGTTTGCTCGGCCCTAGTCAAAGGG CTATGTATGGTTCTCCCTGGGTTTTTATCAGAGACCTCCAAAATCATGAGCAATTTAAAACCATGCAATGAAAGTTATAT CTTCAGTTTAGAGTTACATCTCACAAAGTACCAAACAGATTCAGTTTATAATTTTGTAATTTTCCATACCTTTATGATAT TTTGGCCTTAAAACATATTGAATTCCCAAACAGATATTGTCAGCTTAATAACAGAGAACTTTTCTTGGAAGTGACTAGCT ATTATGAACATTGCAGGGTACAAACGTGGTATCAGGTACTGGAACAGGCTTAGTTATTTCAACTGGATCCAATACTTACT TGAGCACCATGTTTTCCAAGGTTGGGAAGAAGAAGCCACAAGATGACTTTGAAAAGGGTCTCAAATGGATATTTTACATG CTTATTTCTGTTATGCTAGTGGTTGTTACAGTCATGTTTGTGACAGAATACACATCATCTCTTGATTTGAGCAAAAGTAT TCTCTTTGCGATCACAGTAGCATCTGCACTCAATCCTCAGATGCTACCCCTCATCATCAACACATGCCTTGCAAAAGGAG CCCTTGCTATGGCTAAAGACAGATGTATAGTAAAAAGCTTAACAGCTATACGCGAGATGGGATCAATGTGAGTACAAATT CACATTAAAATCAACTGATTGATGATTTAGTGCATGTTTCGTAATTATTCTACAATTGATTCGAAAGTCAGAATCAATTC TGGTGAGAAACTTCTGTAAGTAGCTTCTGAGATCCATATAATTGATTCTGAGAAAAAGATCCTAGCATTCTATTATCTTG ATGCTTGGGTCTAAATTAGGAGCAAACTTCTAAATAGATATGCTAGAATCTAGTTTAACAATAACTGCATCATCAACAAT GAGAACTTAGGGTCCAAAAACTTGCAAGGCATGTGATGAGTGGTTTGTTTTGCTTCAAGTATGCATCTTTTTAGCAAACT CTTCTACTATGCACTTACATTTTATAGTGTTGCAGGGATATCCTTTGTATTGACAAGACAGGCACCCTCACAATGAATCA TGCAATCATGGTTAATCATCTTGACTGTAGAGGTTTACCCCAAGAAAAAGTTCTGCGCTTTGCTTTCCTTAGTTCTTACT TCAAGACTGATCATAATTTTCCTTTGGATGATGCAATCATGGCACATGTATATTCAAATGGATTCAGATTTCAACCATCC AAGTGGAGGAAGGTAGATGAGATTCCTTTTGACTTCATAAGAAGAAGAGTATCTGTCATCTTAGAAACAGAAGACATGCA CTCCCAGTTCTTTGGCAGGTACATGGTAACAAAAGGAGCATTGGAGGAAGTCATGAGAGTTTGTTCTTTTATTGAGAATT TTGATAAAGATGGAATTTCCACCTTCTCTTTAGATGACTACCAGAGGATTTTGAATCTGTCTGAAGAATTGAGCAATGAA GGGTTAAGGGTTATAGCAGTAGCTATAAGGAAGCTGGAAATGGTGAGTCTTTTCCAAATTAATGTCTTCTTACCTTCTTT TCAACTTATCATTATTTTCTTTCTTTTCATGCCAATGACACTCACTTTGCATATCAGATAGCTTAACAAGATTAGGATCA CCTAAGCGGTTGTGCCATTTTGCTATGAACCAACCGTGCCTGAAGCTCAAGCTGTTTATATTTCCAACACATCCCTCACC CTTTTCGCACAAGAACTCATTAATCGAACTCTACATCAAGTAGTCATAACCAGCTATCCTAAAATCTGAAGTTGTTTGCT GAAGACGCGATAATTGTTATATATTATAACATGTCTCACTATCAATTTCAATTTATGTGACATGCAGCAGCAAACATGTG AAACAAGTAATGGAATCAGGAGAGGTTGTGAGGATTTTGAAAGAGACATGATGTTTCTTGGCCTGGTAACATTTTTTGAC CCACCAAAGGACTCAGCAAAGCAAGCACTGTTTCAGTTGGCCAAGATGGGAGTTCAAGCAAAGGTTCTAACCGGTGACTC TCTCAGTTTGGCAACAAGGGTATGCAGAGAAGTTGGAATCAAAACCACACATGTAATCACAGGGCCAGAGCTAGAGCAAC TAGACCAAGACACTTTCCATGAAACTGTCCAAACAGCCACAGTGCTAGCTCGCCTCACCCCGACTCAGAAACTAAGAGTG GTTCAATCCTTGCAGACAAATGGAAACCACATTGTTGGGTTCTTAGGAGATGGAGTGAATGATTCACTTGCTCTTGATGC TGCCCATGTAAGCATTTCAGTGGACTCAGGTGTTGCAATTGCCAAAGACATGGCAGATATAATCTTACTAGAGAAAGATC TCAATGTGCTAGTTGCAGGAGTGGAGCATGGAAGACTCACATTTGGGAACACAATGAAGTATGTGAAGATGTCAGTGATT GCCAACTTGGGAAGTGTGATTTCACTCCTCATAGCATCACTTTTACTCAGGAATGAGCCTTTAACAGCTAGGCAGCTTCT CACTCAGAATTTCATATACAGTGTGGGACAAATTGCTATCCCTTGGGACAAGATGGATGAAGAGTATGTGAAGACTCCTC ACAAATTTTCAGGGAAAGGGTTACCAATGTTCATATTGTGGAATGCACCTGTGTGCACTCTCTGTGATGTTGCAACACTC TTGTTTCTCTGGTTCTATTACAAGTCTTATGATGACTTGGAAGATAAATTCTTCCATTCAGCTTGGTTTATTGAGGGTCT TCTCATGCAGACACTCATCATCCATTTGATTAGGACAGAGAAAGTCCCTTTCATACAGGATGTTGCTTCTTGGCCAGTGA TTTGTTCCACTCTTGTGGTTTCTGCTATTGGAATTGCATTTCCATTCACACCCATTGGGAAGGTCATGGGATTCATTGTT TTACCTGTCTCATTTTTTGGGTTTTTGGTTGTTCTTTTTCTGGGATATTTCACTATTGGCCAGGTTGTTAAGAGACTTTA CATAATGGTTTATAAGAGATGGCTATGA
CDS sequence (LotjaGi4g1v0393900.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTTCAGAACCATAGCTTCTCTTTTCTACCCTCTTTCTCAATTGCAGGGAAACCTGATGGGGGCTCACGAACTGAAGA GGAAGAGAAAGTCTACTCTTGGCTATATACCTTGGCCCAGTCTGACAAAAACTTGGTCTTTGAGTATGTTAGGTCCACAG AAAGAGGCTTAACATTCACTGAAGCTGAGAGCAGGCTGCAAGAAAATGGTCCAAACGTTCCATTTGATTATTCTTTTCCA AGCTGGTGGCATTTTCTATGGAAAGCTCTTTTCCACGCTTTCAACATGATTCTCATTGTTTTATCTGCTCTGTCATTCAT CACCTGTGACTATCCAAATGGATCCATCATGCTCATATTGGTTTTCATCAGTGTCTCCCTCCGTTTCTATCAGGAATATA GCAGCTCGAAAGCAGCTAAGAGGCTTTCAGAATTTTTGAGATGCCCGGTGCGAGTTCAAAGATGTGCCGGTAGAGTTGTG CAGACAGAATTGAAGGTTCAAGTTGATCACAGGGATGTAGTTCCTGGTGACATTGTGATTTTTGAACCTGGGGACCTCTT TCCAGGGGATATCAGATTGTTATCTTCAACACATCTTGTTGTAAGCCAGGCCTCATTAACTGGGGAGTCTTGGACAACGG AAAAAACTGCTGATGTTAGAGAAGATCACAGCACACCTTTACTAGATTTAAAGAACATCTGCTTTATGGGTACAAACGTG GTATCAGGTACTGGAACAGGCTTAGTTATTTCAACTGGATCCAATACTTACTTGAGCACCATGTTTTCCAAGGTTGGGAA GAAGAAGCCACAAGATGACTTTGAAAAGGGTCTCAAATGGATATTTTACATGCTTATTTCTGTTATGCTAGTGGTTGTTA CAGTCATGTTTGTGACAGAATACACATCATCTCTTGATTTGAGCAAAAGTATTCTCTTTGCGATCACAGTAGCATCTGCA CTCAATCCTCAGATGCTACCCCTCATCATCAACACATGCCTTGCAAAAGGAGCCCTTGCTATGGCTAAAGACAGATGTAT AGTAAAAAGCTTAACAGCTATACGCGAGATGGGATCAATGGATATCCTTTGTATTGACAAGACAGGCACCCTCACAATGA ATCATGCAATCATGGTTAATCATCTTGACTGTAGAGGTTTACCCCAAGAAAAAGTTCTGCGCTTTGCTTTCCTTAGTTCT TACTTCAAGACTGATCATAATTTTCCTTTGGATGATGCAATCATGGCACATGTATATTCAAATGGATTCAGATTTCAACC ATCCAAGTGGAGGAAGGTAGATGAGATTCCTTTTGACTTCATAAGAAGAAGAGTATCTGTCATCTTAGAAACAGAAGACA TGCACTCCCAGTTCTTTGGCAGGTACATGGTAACAAAAGGAGCATTGGAGGAAGTCATGAGAGTTTGTTCTTTTATTGAG AATTTTGATAAAGATGGAATTTCCACCTTCTCTTTAGATGACTACCAGAGGATTTTGAATCTGTCTGAAGAATTGAGCAA TGAAGGGTTAAGGGTTATAGCAGTAGCTATAAGGAAGCTGGAAATGCAGCAAACATGTGAAACAAGTAATGGAATCAGGA GAGGTTGTGAGGATTTTGAAAGAGACATGATGTTTCTTGGCCTGGTAACATTTTTTGACCCACCAAAGGACTCAGCAAAG CAAGCACTGTTTCAGTTGGCCAAGATGGGAGTTCAAGCAAAGGTTCTAACCGGTGACTCTCTCAGTTTGGCAACAAGGGT ATGCAGAGAAGTTGGAATCAAAACCACACATGTAATCACAGGGCCAGAGCTAGAGCAACTAGACCAAGACACTTTCCATG AAACTGTCCAAACAGCCACAGTGCTAGCTCGCCTCACCCCGACTCAGAAACTAAGAGTGGTTCAATCCTTGCAGACAAAT GGAAACCACATTGTTGGGTTCTTAGGAGATGGAGTGAATGATTCACTTGCTCTTGATGCTGCCCATGTAAGCATTTCAGT GGACTCAGGTGTTGCAATTGCCAAAGACATGGCAGATATAATCTTACTAGAGAAAGATCTCAATGTGCTAGTTGCAGGAG TGGAGCATGGAAGACTCACATTTGGGAACACAATGAAGTATGTGAAGATGTCAGTGATTGCCAACTTGGGAAGTGTGATT TCACTCCTCATAGCATCACTTTTACTCAGGAATGAGCCTTTAACAGCTAGGCAGCTTCTCACTCAGAATTTCATATACAG TGTGGGACAAATTGCTATCCCTTGGGACAAGATGGATGAAGAGTATGTGAAGACTCCTCACAAATTTTCAGGGAAAGGGT TACCAATGTTCATATTGTGGAATGCACCTGTGTGCACTCTCTGTGATGTTGCAACACTCTTGTTTCTCTGGTTCTATTAC AAGTCTTATGATGACTTGGAAGATAAATTCTTCCATTCAGCTTGGTTTATTGAGGGTCTTCTCATGCAGACACTCATCAT CCATTTGATTAGGACAGAGAAAGTCCCTTTCATACAGGATGTTGCTTCTTGGCCAGTGATTTGTTCCACTCTTGTGGTTT CTGCTATTGGAATTGCATTTCCATTCACACCCATTGGGAAGGTCATGGGATTCATTGTTTTACCTGTCTCATTTTTTGGG TTTTTGGTTGTTCTTTTTCTGGGATATTTCACTATTGGCCAGGTTGTTAAGAGACTTTACATAATGGTTTATAAGAGATG GCTATGA
Protein sequence (LotjaGi4g1v0393900.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLQNHSFSFLPSFSIAGKPDGGSRTEEEEKVYSWLYTLAQSDKNLVFEYVRSTERGLTFTEAESRLQENGPNVPFDYSFP SWWHFLWKALFHAFNMILIVLSALSFITCDYPNGSIMLILVFISVSLRFYQEYSSSKAAKRLSEFLRCPVRVQRCAGRVV QTELKVQVDHRDVVPGDIVIFEPGDLFPGDIRLLSSTHLVVSQASLTGESWTTEKTADVREDHSTPLLDLKNICFMGTNV VSGTGTGLVISTGSNTYLSTMFSKVGKKKPQDDFEKGLKWIFYMLISVMLVVVTVMFVTEYTSSLDLSKSILFAITVASA LNPQMLPLIINTCLAKGALAMAKDRCIVKSLTAIREMGSMDILCIDKTGTLTMNHAIMVNHLDCRGLPQEKVLRFAFLSS YFKTDHNFPLDDAIMAHVYSNGFRFQPSKWRKVDEIPFDFIRRRVSVILETEDMHSQFFGRYMVTKGALEEVMRVCSFIE NFDKDGISTFSLDDYQRILNLSEELSNEGLRVIAVAIRKLEMQQTCETSNGIRRGCEDFERDMMFLGLVTFFDPPKDSAK QALFQLAKMGVQAKVLTGDSLSLATRVCREVGIKTTHVITGPELEQLDQDTFHETVQTATVLARLTPTQKLRVVQSLQTN GNHIVGFLGDGVNDSLALDAAHVSISVDSGVAIAKDMADIILLEKDLNVLVAGVEHGRLTFGNTMKYVKMSVIANLGSVI SLLIASLLLRNEPLTARQLLTQNFIYSVGQIAIPWDKMDEEYVKTPHKFSGKGLPMFILWNAPVCTLCDVATLLFLWFYY KSYDDLEDKFFHSAWFIEGLLMQTLIIHLIRTEKVPFIQDVASWPVICSTLVVSAIGIAFPFTPIGKVMGFIVLPVSFFG FLVVLFLGYFTIGQVVKRLYIMVYKRWL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 84 | 84 | - | – | |
| PANTHER | 29 | 905 | 877 | 0.0 | – | |
| PANTHER | 29 | 905 | 877 | 0.0 | – | |
| TIGRFAM | 29 | 907 | 879 | 3.8E-258 | ||
| SMART | 37 | 110 | 74 | 0.0016 | ||
| Pfam | 47 | 105 | 59 | 1.1E-10 | ||
| SUPERFAMILY | 52 | 905 | 854 | 1.44E-76 | ||
| Gene3D | 55 | 246 | 192 | 9.5E-68 | – | |
| Phobius | 85 | 107 | 23 | - | – | |
| Gene3D | 85 | 360 | 276 | 9.5E-68 | – | |
| TMHMM | 85 | 107 | 23 | - | – | |
| Phobius | 108 | 112 | 5 | - | – | |
| TMHMM | 111 | 130 | 20 | - | – | |
| Phobius | 113 | 130 | 18 | - | – | |
| TIGRFAM | 117 | 411 | 295 | 5.8E-30 | ||
| Phobius | 131 | 279 | 149 | - | – | |
| Pfam | 159 | 343 | 185 | 3.9E-33 | – | |
| SUPERFAMILY | 159 | 263 | 105 | 3.79E-25 | ||
| PRINTS | 277 | 293 | 17 | 4.4E-29 | ||
| TMHMM | 277 | 299 | 23 | - | – | |
| Phobius | 280 | 299 | 20 | - | – | |
| Phobius | 300 | 310 | 11 | - | – | |
| Phobius | 311 | 335 | 25 | - | – | |
| Phobius | 336 | 706 | 371 | - | – | |
| SFLD | 346 | 698 | 353 | 0.0 | – | |
| SFLD | 346 | 698 | 353 | 0.0 | – | |
| SUPERFAMILY | 360 | 698 | 339 | 1.1E-32 | ||
| Pfam | 360 | 661 | 302 | 1.4E-14 | – | |
| Gene3D | 361 | 373 | 13 | 9.5E-68 | ||
| ProSitePatterns | 366 | 372 | 7 | - | ||
| Gene3D | 427 | 554 | 128 | 8.5E-69 | ||
| Gene3D | 555 | 692 | 138 | 8.5E-69 | ||
| TIGRFAM | 615 | 727 | 113 | 6.2E-24 | ||
| Gene3D | 693 | 802 | 110 | 8.5E-69 | – | |
| PRINTS | 706 | 721 | 16 | 4.4E-29 | ||
| Phobius | 707 | 729 | 23 | - | – | |
| TMHMM | 707 | 729 | 23 | - | – | |
| Phobius | 730 | 734 | 5 | - | – | |
| Phobius | 735 | 755 | 21 | - | – | |
| Phobius | 756 | 775 | 20 | - | – | |
| PRINTS | 756 | 769 | 14 | 4.4E-29 | ||
| PRINTS | 776 | 792 | 17 | 4.4E-29 | ||
| Phobius | 776 | 800 | 25 | - | – | |
| TMHMM | 778 | 800 | 23 | - | – | |
| Phobius | 801 | 811 | 11 | - | – | |
| TMHMM | 810 | 829 | 20 | - | – | |
| PRINTS | 811 | 832 | 22 | 4.4E-29 | ||
| Phobius | 812 | 830 | 19 | - | – | |
| Phobius | 831 | 841 | 11 | - | – | |
| TMHMM | 841 | 863 | 23 | - | – | |
| Phobius | 842 | 862 | 21 | - | – | |
| PRINTS | 861 | 882 | 22 | 4.4E-29 | ||
| Phobius | 863 | 867 | 5 | - | – | |
| Phobius | 868 | 892 | 25 | - | – | |
| TMHMM | 868 | 890 | 23 | - | – | |
| Phobius | 893 | 908 | 16 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. | ||
| Molecular function | Magnesium-importing ATPase activity | Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Mg2+(out) -> ADP + phosphate + Mg2+(in). | ||
| Biological process | Magnesium ion transport | The directed movement of magnesium (Mg) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi4g1v0393900.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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