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Field | Value |
---|---|
Gene ID | LotjaGi5g1v0048400 |
Transcript ID | LotjaGi5g1v0048400.1 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Kinase family protein; TAIR: AT2G05940.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q9ZUF4|RIPK_ARATH Serine/threonine-protein kinase RIPK; TrEMBL-Plants: tr|I1M9C6|I1M9C6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0048400 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:8115839..8121759) extracted from Lotus japonicus Gifu genome v1.2.
CTTCTCTTTGATGGCTTTATTACCATTCTATGAACACAAATTTATCAATCCAAGGTAAAAAGTTAATGACAAATATTTAC AAGTGTTTTCTTGAGATACAAATTAAAAAAATACAATTTAATAAAAGGAATTTATTCATATAATTTAATATATATATATA TATATATATATATATATATTAGCAGGGTCTATCCTTAACCAACAATATTTTTAGAAAAATGATGACAAAATTAAATTGTC TAAGAGCAATCCCATTCATTCAAAATAGCCTAGCCTTAAGTTCTAGATTCTAGAAGCTGCCCTTGATGAATCACACCTTA AAGAAGTGTGTCAGTGTCGGCTTGCTAAGTTATGATTATGACATCTTAACAGCAATAATCCAGAGAAGCTTTACCTACCA AACACAGGGAAATATATCAATTAGTGCATAAGAATAATTCTTAGCAATCACACAAAGAACTTAAGAGTTATAAATAAATA TGGCAGATGTCTGCAATATAGCCCCCTATGAACGATTAAAGAAAAACATTTGGTGTGTGCAACAAAAGATTTGATAATGG AATTGTTGGTTTAGATTAATGGATTTATGTTAGATCCCTCCATTTTGCAATTTTCCCTAGGGAATGTTGTATAAAGTATA AACACAAATATGTGGACGGCAAGGGATGCAAGAAACAAAAACAAGATGGAGATACATAACATGAACTTAGAGGGCATTGT GGAGGCAGAGTTTTGTGTATAATTGAAGTCAACAGGGTAGGCAAGTTACTTGACCTATAATTAATTGAACACAGATATCA TAATAATTATAGTTTTAATATATTAAAAAATTCACAAAGAATGACATTTAAATGCTTCATACATACATACGTGTAGTTCA ACTCTAGTAAAAGAATTTTGTTGTTTCAAATAGTACATGTTTGGTTACTTTTAAGTAAAATGTAAGATTCGAGTCTTGTA TATGAAAAAACTAACTCCACAAAACTCGGCTAAAACAAAATTGTTTCATAAATTGTTGGTTCAAGTGGTATATACGAAAT TAAACTATCAATTGGAAAAAATCTTGACCATATCAAGTTTTATCATTGAGAGGATCATAATCCGGTATATGCTTGATTTT CTTAAGCAAAGTCTCAAATTAGAACATTTTGTGTGAAATAAACAAAAAAAAAATTATTGGGAGAGCTTGTCCCACAAATC TAACTCGAACCAAATTGTCTCGTGTGCAAATACATGTATTAACGGAAAAAATCATACTCTATAACTCTACCATCCATATT CAAGTGGTCTAGAAGTCAAGGAATCTCCCCAAACCATCCTCTTCTAAGGTAGTAGGTGAAAGTCCGTACTATAAATTTTT CTCAGCTTTCATTTTTAATTTTCCAAGGGGCAACAATCATCCCCATTTTAATGTCGTCTTCCTCATTTTTTAGTTTCAAA AGAAGAGGTTGCTTGTGACAAGAAAAAAGTGCATTGCACAGTTTATTGCACATATTATACCAATTCTAGATGACTACTAA AAGGGTTACATGGAAGTCTATGAACTTGATCCTGAGCTGTTACAAGACTAAGTTCCCATTGGAGGATTCTGAGAAACGGG TTTTGAAACAAGGATCATTCCAGAGGTTGTGTCTATCTGATGTAAGCAACTCAAGCTCTACTCAAGCCATTGAAGATCTT TCAGTTTCATTTGGTGGTTCAAAACTTTATGCATTCACACTTGAGGAGCTGAGAGAGGCAACAAGAAATTTCTCATGGAG TAACATGCTTGGTGAAGGAGGGTTTGGACCTGTTTACAAGGGCTTTTTTGATGACAGACTCAGGCCTGGTTTGAAGGCTC AGACAGTGGCTGTGAAACAATTGGACTTGGATGGCTTGCAAGGTCACAGGGAGTGGCTGGTTAGCTTTCTGAAGTGCCCT TTATAGCTTCTTAATAACATGTTTCGATGAGCTTATTTACGCTCAGAATCAATTCTGTCACCGAGAAGCTACTCATAGAA GTTTCTCGGCACAATTGATTCTGTCTTTAGAGCTCATTAATAGCATGTTTTGATCAGCTTATTTGTGCTCAAAATCAATT CTGGTGCAGAGAAGCTTCTCCCCAAAATTGATTATGGGTTTAGACTCAACTTTAGATAGATTTCTAAACATGCTGTAAGA ATAGTGCCCCCACTCTATTTCTTTGCTAGTCACAAATAAATACTAATGAATGAAAATCTCAGAAGAATTAATGGAACACT AGTGTCTAACTCTTTTAAAAAATTTTGTTGGAATTTTGTTTTTTAGGCAGAGATTATATTTCTTGGACAGCTAAGGCATC CACATCTTGTTAAGTTAATTGGGTACTGTTATGAGGATGAAAACAGGCTATTGGTGTATGAATACATGCCAAGAGGCAGC TTGGAGAATCAACTCTTCAGAAGTATGTTGCTTTTCTATCTCTCTGCTTACCCTACTCCTTTTTCTCAAGCTTTCCCAAA ATAAATATGAATAAATTGAGTTAAAGTCGGTTCATATTTAGAAATCTTTTTACAATTGATTCTAAAGTCAGAACCAATTC TTGATAGAAGCTTCACACAGCTTTCGAGTTTCAGAATTGATTTTGAGAAAAGAGAAGTTCATCCAATCATGCTATCACTA TATATTTACATAAAGCCCCAAGGTTATCTTTTTATGAATTTCTTACCATAATGATTATCATTAGGTATCTAGTTATATAT GATGATCAAATGATTTGGATCTTCTCTTCTATATTACCAAGCACACCTAAATACCAAGTTATTTCAAATCTTTTGATTAG TTTTATTTGGACTCTGATGTGAAACCCTATTACTAGTACAAGAATTTGGATTCTTACCATAAACCAAGCCTTATGGATGC TTCTTTTGCTCTGTCACAAGCAGAATACTCTGCTGCCATGCCATGGTCTACAAGGATGAAAGTTGCATTAGGTGCTGCTA AGGGGCTAGCTTTTCTTCATGAAGCAGATAAACCTGTAATCTACAGGGATTTCAAAGCTTCAAACATCTTGCTAGACTCA GTAAGTTCTTTCTTCTCTGCTCTCTTGATTTCTTATCATCTGTTAGAGGATCATCTTGCTTCTCCTACATCATCTTCGCC TTCGCCGTATCAAGAAATTAACTCAGACTCTTTTAATTTCTGAGTCCAGGACTATACAGCTAAACTCTCAGACTTTGGTC TTGCTAAGGATGGCCCTGATGGGGAAGAAACACATGTAACAACGCGCATCATGGGAACACATGGCTATGCCGCTCCTGAG TACATCATGACAGGTATATGAAAACTACCATCAATGATATGAATCAGGCTTTTAGTATGATGACACATAAAAATTAAGAA GGGGAAAAGAGATTTCCATTCCAAGGGTCTGTTAGAAATCTTAAGAAGAACTATAGTATTACAATTCCTAGCATATGGAA TTATGGATCTTTAAAAAGTAAAATAGGGGAAAGGAGACTATTCCATTCCAAGAGTATGTTAGAAGCCTCCACAATAACTA ATAGCCATATCAACCATGTGCATGTTTGAAAACCCTTCTTCCAATTGATTCTGAAGCCAGAATCACTTCTGTTAGTAGCT TTTGAATTTCAGAATTGATTCAGATAAAAGAGAAATTGATGCAAACATGCGATTAAGTTCCTAGAATGATGGATCCTTAA AAAGTAAAATAGGAGAAAGGAGCTATTCCAGTCAAGAGTATACTATGTTACAACTTACAAGCCCTCAAAAGAACTAATAA TAGTAAGCTCCCCAACCAAAGAAGCTTATTTGCAGTGTAAAGACAACTTTGACCTTCAAGTGAAAAGCATGAATTCTTAC ACTACCTTTCAATCTATTAACTCCCCCTTATTTTGTCACTTCCTTAATTTCTGAGATCAAATAGGAAACAAAACCTTCTT CACAACCCAATGATATATTTCTTACAATCATGTTTAAAAATTCTTCCACAATTGATTCTGAAACCAAAATCAATTCTGGA GAGAAGCTCCTATGAGTAGAATCTGGGTGCCATAATTGGTTTTGAGGAGTTGATTGAATCATGTATTTGAAGCTAACTCT TGCTTGATTATAGGTCACCTTACAACCAAGAGTGATGTGTACAGCTATGGAGTTGTTCTGCTGGAACTGCTGACAGGAAG AAGGGTAGTGGAAAAGTCCCAGTCGAATCGAGGGAGGAGCTTGGTGGAATGGGCAAGACCTATGCTGAGAGACCAGAAGA AGCTGCACCGGATCATAGACAGAAAACTTGAAGGCCAATTTCCATCCAAAGGAGCCATGAAAGTTGCTATGTTGGCTTTT AAATGCTTGAGCCACCATCCAAATCCAAGGCCCTCCATGAGTGATGTGGTGAAGGTTTTGGAGCCACTTCAGGACTTTGA CGATGTTCTCATAGGGCCATTTGTGTATGTCGCTGTCAATGAAAACGGCGACAAGGATAAAATATAGCAGCAACACACCT CACAAATGCAGATAAAATATACAAGACACCAAAAGGAAAAGGTAAAACAAAAGGAAAAGAAAGTGATGTGTTTCTTATTT CATTTTGCAAGTGACAGCTTGATCTTCACAACCATGAAGCATGATGCAAGTTAGTTATTATATATTTATCTGACTGTGGC TTTGAAATAGAAAGCTGCAATAAGAAAGGTGATGTTTTCAGGGGAAAATAAGTAGTACCACATCAGAAACCATGTTATCA GAAGAGGTAATTGAGGTTTCTAAGGTTTGATCATGTACAAAACAATGTAGAAGCACTTGAAACAAGTGCTTGTACGGATG TTATTACTTGTATCAAAAGTTTGGATTAGTTTGGAGACTTAACTCTAGTATAGATATATCCAAACTAAATTTTATTCACA AATCATGTATATTTGACAAAATTATTGTTGGCTGGGTTGTGCAGATGATTTTTTATTTTACATCACATTTTAGAGAACGT GGAGAAGTTTTTTTATCCATTAAGTCAAGCCAATATTTTTAAACTTAAAAAATTAAAAAAAATAGATTATGAGTTAGAAA TATTCATGAAGCTTATCCTTGGTAGATATTTTATTTTATATTCTAATTGAGGTGGGCTGGGTATTTTAGGTGATTAATGC TTGAGCCACCACCCAAATCTCCTTCACACGGCCAATGGGAAAATTAATGAATTTATTTAGTAAAAACCTAATTTCGACCC ATTACGGGATAATAGGAACATGATGGCTCATTTGATACGTCGTATCACATCGTATAAGGTTATACAATACATTATGATTT TATCATTGTTTAGTGTAAATATTGTATTGTATAAACTTATCCATCAATTCACTTTTATACTATTAAATGATGAATTATTT AATCCAACATATAGATGTGAGATAAGGTTTAAGAATGTTATGATATTTGAGTAATTTGAAAATATTCAATCCATTGCCAC GGGTCACAACCACCACCATCATCCATCACCACGTCCACACCACCCCCACCACCACCCTCTACCACTGCCACCATCACCAC TATCGTTATTCCCACCACCACCACCATCAACCGCAATAGCTGCCGCCACAACATCACCACCACTACTTCCACCACAACCA CAACTAACTCCACCACAGCCCACATAAGTAGACCTGACACCAAACATGATGATTAATTGGTATGAGATTGTTCTAGTATA AGCTGAGGTTTCTGAGTTATGTAAAACTGATTGTATTAAATAGTTGATAGAAAATGTTTTGTCGCGTGTATGGTTATAAA AAAAAGTAGGCTTAATGGTCAAATTGGTCCTTGTGTTTATAATGACTTTTGGTTTTAGTCCCTCCACGAAAATAACTAGT CGAAATCTCCCTGCAGTTGCAAGCACTTTTGTTCAAGTCCTCACCGAAGGGTGGAGCTCCGGTGAGGCCCCACCTGACAC G
CDS sequence (LotjaGi5g1v0048400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACTACTAAAAGGGTTACATGGAAGTCTATGAACTTGATCCTGAGCTGTTACAAGACTAAGTTCCCATTGGAGGATTC TGAGAAACGGGTTTTGAAACAAGGATCATTCCAGAGGTTGTGTCTATCTGATGTAAGCAACTCAAGCTCTACTCAAGCCA TTGAAGATCTTTCAGTTTCATTTGGTGGTTCAAAACTTTATGCATTCACACTTGAGGAGCTGAGAGAGGCAACAAGAAAT TTCTCATGGAGTAACATGCTTGGTGAAGGAGGGTTTGGACCTGTTTACAAGGGCTTTTTTGATGACAGACTCAGGCCTGG TTTGAAGGCTCAGACAGTGGCTGTGAAACAATTGGACTTGGATGGCTTGCAAGGTCACAGGGAGTGGCTGGCAGAGATTA TATTTCTTGGACAGCTAAGGCATCCACATCTTGTTAAGTTAATTGGGTACTGTTATGAGGATGAAAACAGGCTATTGGTG TATGAATACATGCCAAGAGGCAGCTTGGAGAATCAACTCTTCAGAAAATACTCTGCTGCCATGCCATGGTCTACAAGGAT GAAAGTTGCATTAGGTGCTGCTAAGGGGCTAGCTTTTCTTCATGAAGCAGATAAACCTGTAATCTACAGGGATTTCAAAG CTTCAAACATCTTGCTAGACTCAGACTATACAGCTAAACTCTCAGACTTTGGTCTTGCTAAGGATGGCCCTGATGGGGAA GAAACACATGTAACAACGCGCATCATGGGAACACATGGCTATGCCGCTCCTGAGTACATCATGACAGGTCACCTTACAAC CAAGAGTGATGTGTACAGCTATGGAGTTGTTCTGCTGGAACTGCTGACAGGAAGAAGGGTAGTGGAAAAGTCCCAGTCGA ATCGAGGGAGGAGCTTGGTGGAATGGGCAAGACCTATGCTGAGAGACCAGAAGAAGCTGCACCGGATCATAGACAGAAAA CTTGAAGGCCAATTTCCATCCAAAGGAGCCATGAAAGTTGCTATGTTGGCTTTTAAATGCTTGAGCCACCATCCAAATCC AAGGCCCTCCATGAGTGATGTGGTGAAGGTTTTGGAGCCACTTCAGGACTTTGACGATGTTCTCATAGGGCCATTTGTGT ATGTCGCTGTCAATGAAAACGGCGACAAGGATAAAATATAG
Protein sequence (LotjaGi5g1v0048400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTTKRVTWKSMNLILSCYKTKFPLEDSEKRVLKQGSFQRLCLSDVSNSSSTQAIEDLSVSFGGSKLYAFTLEELREATRN FSWSNMLGEGGFGPVYKGFFDDRLRPGLKAQTVAVKQLDLDGLQGHREWLAEIIFLGQLRHPHLVKLIGYCYEDENRLLV YEYMPRGSLENQLFRKYSAAMPWSTRMKVALGAAKGLAFLHEADKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPDGE ETHVTTRIMGTHGYAAPEYIMTGHLTTKSDVYSYGVVLLELLTGRRVVEKSQSNRGRSLVEWARPMLRDQKKLHRIIDRK LEGQFPSKGAMKVAMLAFKCLSHHPNPRPSMSDVVKVLEPLQDFDDVLIGPFVYVAVNENGDKDKI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 5 | 384 | 380 | 1.9E-249 | – | |
PANTHER | 5 | 384 | 380 | 1.9E-249 | – | |
Gene3D | 42 | 163 | 122 | 6.4E-34 | – | |
SUPERFAMILY | 58 | 359 | 302 | 9.23E-82 | ||
ProSiteProfiles | 81 | 362 | 282 | 38.676 | ||
Pfam | 83 | 358 | 276 | 2.5E-49 | ||
CDD | 87 | 361 | 275 | 5.04661E-94 | – | |
Gene3D | 164 | 367 | 204 | 1.1E-61 | – | |
ProSitePatterns | 207 | 219 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi5g1v0048400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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