Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi5g1v0048400.1

Overview

Field Value
Gene ID LotjaGi5g1v0048400
Transcript ID LotjaGi5g1v0048400.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Kinase family protein; TAIR: AT2G05940.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q9ZUF4|RIPK_ARATH Serine/threonine-protein kinase RIPK; TrEMBL-Plants: tr|I1M9C6|I1M9C6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0048400
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:8115839..8121759) extracted from Lotus japonicus Gifu genome v1.2.

CTTCTCTTTGATGGCTTTATTACCATTCTATGAACACAAATTTATCAATCCAAGGTAAAAAGTTAATGACAAATATTTAC AAGTGTTTTCTTGAGATACAAATTAAAAAAATACAATTTAATAAAAGGAATTTATTCATATAATTTAATATATATATATA TATATATATATATATATATTAGCAGGGTCTATCCTTAACCAACAATATTTTTAGAAAAATGATGACAAAATTAAATTGTC TAAGAGCAATCCCATTCATTCAAAATAGCCTAGCCTTAAGTTCTAGATTCTAGAAGCTGCCCTTGATGAATCACACCTTA AAGAAGTGTGTCAGTGTCGGCTTGCTAAGTTATGATTATGACATCTTAACAGCAATAATCCAGAGAAGCTTTACCTACCA AACACAGGGAAATATATCAATTAGTGCATAAGAATAATTCTTAGCAATCACACAAAGAACTTAAGAGTTATAAATAAATA TGGCAGATGTCTGCAATATAGCCCCCTATGAACGATTAAAGAAAAACATTTGGTGTGTGCAACAAAAGATTTGATAATGG AATTGTTGGTTTAGATTAATGGATTTATGTTAGATCCCTCCATTTTGCAATTTTCCCTAGGGAATGTTGTATAAAGTATA AACACAAATATGTGGACGGCAAGGGATGCAAGAAACAAAAACAAGATGGAGATACATAACATGAACTTAGAGGGCATTGT GGAGGCAGAGTTTTGTGTATAATTGAAGTCAACAGGGTAGGCAAGTTACTTGACCTATAATTAATTGAACACAGATATCA TAATAATTATAGTTTTAATATATTAAAAAATTCACAAAGAATGACATTTAAATGCTTCATACATACATACGTGTAGTTCA ACTCTAGTAAAAGAATTTTGTTGTTTCAAATAGTACATGTTTGGTTACTTTTAAGTAAAATGTAAGATTCGAGTCTTGTA TATGAAAAAACTAACTCCACAAAACTCGGCTAAAACAAAATTGTTTCATAAATTGTTGGTTCAAGTGGTATATACGAAAT TAAACTATCAATTGGAAAAAATCTTGACCATATCAAGTTTTATCATTGAGAGGATCATAATCCGGTATATGCTTGATTTT CTTAAGCAAAGTCTCAAATTAGAACATTTTGTGTGAAATAAACAAAAAAAAAATTATTGGGAGAGCTTGTCCCACAAATC TAACTCGAACCAAATTGTCTCGTGTGCAAATACATGTATTAACGGAAAAAATCATACTCTATAACTCTACCATCCATATT CAAGTGGTCTAGAAGTCAAGGAATCTCCCCAAACCATCCTCTTCTAAGGTAGTAGGTGAAAGTCCGTACTATAAATTTTT CTCAGCTTTCATTTTTAATTTTCCAAGGGGCAACAATCATCCCCATTTTAATGTCGTCTTCCTCATTTTTTAGTTTCAAA AGAAGAGGTTGCTTGTGACAAGAAAAAAGTGCATTGCACAGTTTATTGCACATATTATACCAATTCTAGATGACTACTAA AAGGGTTACATGGAAGTCTATGAACTTGATCCTGAGCTGTTACAAGACTAAGTTCCCATTGGAGGATTCTGAGAAACGGG TTTTGAAACAAGGATCATTCCAGAGGTTGTGTCTATCTGATGTAAGCAACTCAAGCTCTACTCAAGCCATTGAAGATCTT TCAGTTTCATTTGGTGGTTCAAAACTTTATGCATTCACACTTGAGGAGCTGAGAGAGGCAACAAGAAATTTCTCATGGAG TAACATGCTTGGTGAAGGAGGGTTTGGACCTGTTTACAAGGGCTTTTTTGATGACAGACTCAGGCCTGGTTTGAAGGCTC AGACAGTGGCTGTGAAACAATTGGACTTGGATGGCTTGCAAGGTCACAGGGAGTGGCTGGTTAGCTTTCTGAAGTGCCCT TTATAGCTTCTTAATAACATGTTTCGATGAGCTTATTTACGCTCAGAATCAATTCTGTCACCGAGAAGCTACTCATAGAA GTTTCTCGGCACAATTGATTCTGTCTTTAGAGCTCATTAATAGCATGTTTTGATCAGCTTATTTGTGCTCAAAATCAATT CTGGTGCAGAGAAGCTTCTCCCCAAAATTGATTATGGGTTTAGACTCAACTTTAGATAGATTTCTAAACATGCTGTAAGA ATAGTGCCCCCACTCTATTTCTTTGCTAGTCACAAATAAATACTAATGAATGAAAATCTCAGAAGAATTAATGGAACACT AGTGTCTAACTCTTTTAAAAAATTTTGTTGGAATTTTGTTTTTTAGGCAGAGATTATATTTCTTGGACAGCTAAGGCATC CACATCTTGTTAAGTTAATTGGGTACTGTTATGAGGATGAAAACAGGCTATTGGTGTATGAATACATGCCAAGAGGCAGC TTGGAGAATCAACTCTTCAGAAGTATGTTGCTTTTCTATCTCTCTGCTTACCCTACTCCTTTTTCTCAAGCTTTCCCAAA ATAAATATGAATAAATTGAGTTAAAGTCGGTTCATATTTAGAAATCTTTTTACAATTGATTCTAAAGTCAGAACCAATTC TTGATAGAAGCTTCACACAGCTTTCGAGTTTCAGAATTGATTTTGAGAAAAGAGAAGTTCATCCAATCATGCTATCACTA TATATTTACATAAAGCCCCAAGGTTATCTTTTTATGAATTTCTTACCATAATGATTATCATTAGGTATCTAGTTATATAT GATGATCAAATGATTTGGATCTTCTCTTCTATATTACCAAGCACACCTAAATACCAAGTTATTTCAAATCTTTTGATTAG TTTTATTTGGACTCTGATGTGAAACCCTATTACTAGTACAAGAATTTGGATTCTTACCATAAACCAAGCCTTATGGATGC TTCTTTTGCTCTGTCACAAGCAGAATACTCTGCTGCCATGCCATGGTCTACAAGGATGAAAGTTGCATTAGGTGCTGCTA AGGGGCTAGCTTTTCTTCATGAAGCAGATAAACCTGTAATCTACAGGGATTTCAAAGCTTCAAACATCTTGCTAGACTCA GTAAGTTCTTTCTTCTCTGCTCTCTTGATTTCTTATCATCTGTTAGAGGATCATCTTGCTTCTCCTACATCATCTTCGCC TTCGCCGTATCAAGAAATTAACTCAGACTCTTTTAATTTCTGAGTCCAGGACTATACAGCTAAACTCTCAGACTTTGGTC TTGCTAAGGATGGCCCTGATGGGGAAGAAACACATGTAACAACGCGCATCATGGGAACACATGGCTATGCCGCTCCTGAG TACATCATGACAGGTATATGAAAACTACCATCAATGATATGAATCAGGCTTTTAGTATGATGACACATAAAAATTAAGAA GGGGAAAAGAGATTTCCATTCCAAGGGTCTGTTAGAAATCTTAAGAAGAACTATAGTATTACAATTCCTAGCATATGGAA TTATGGATCTTTAAAAAGTAAAATAGGGGAAAGGAGACTATTCCATTCCAAGAGTATGTTAGAAGCCTCCACAATAACTA ATAGCCATATCAACCATGTGCATGTTTGAAAACCCTTCTTCCAATTGATTCTGAAGCCAGAATCACTTCTGTTAGTAGCT TTTGAATTTCAGAATTGATTCAGATAAAAGAGAAATTGATGCAAACATGCGATTAAGTTCCTAGAATGATGGATCCTTAA AAAGTAAAATAGGAGAAAGGAGCTATTCCAGTCAAGAGTATACTATGTTACAACTTACAAGCCCTCAAAAGAACTAATAA TAGTAAGCTCCCCAACCAAAGAAGCTTATTTGCAGTGTAAAGACAACTTTGACCTTCAAGTGAAAAGCATGAATTCTTAC ACTACCTTTCAATCTATTAACTCCCCCTTATTTTGTCACTTCCTTAATTTCTGAGATCAAATAGGAAACAAAACCTTCTT CACAACCCAATGATATATTTCTTACAATCATGTTTAAAAATTCTTCCACAATTGATTCTGAAACCAAAATCAATTCTGGA GAGAAGCTCCTATGAGTAGAATCTGGGTGCCATAATTGGTTTTGAGGAGTTGATTGAATCATGTATTTGAAGCTAACTCT TGCTTGATTATAGGTCACCTTACAACCAAGAGTGATGTGTACAGCTATGGAGTTGTTCTGCTGGAACTGCTGACAGGAAG AAGGGTAGTGGAAAAGTCCCAGTCGAATCGAGGGAGGAGCTTGGTGGAATGGGCAAGACCTATGCTGAGAGACCAGAAGA AGCTGCACCGGATCATAGACAGAAAACTTGAAGGCCAATTTCCATCCAAAGGAGCCATGAAAGTTGCTATGTTGGCTTTT AAATGCTTGAGCCACCATCCAAATCCAAGGCCCTCCATGAGTGATGTGGTGAAGGTTTTGGAGCCACTTCAGGACTTTGA CGATGTTCTCATAGGGCCATTTGTGTATGTCGCTGTCAATGAAAACGGCGACAAGGATAAAATATAGCAGCAACACACCT CACAAATGCAGATAAAATATACAAGACACCAAAAGGAAAAGGTAAAACAAAAGGAAAAGAAAGTGATGTGTTTCTTATTT CATTTTGCAAGTGACAGCTTGATCTTCACAACCATGAAGCATGATGCAAGTTAGTTATTATATATTTATCTGACTGTGGC TTTGAAATAGAAAGCTGCAATAAGAAAGGTGATGTTTTCAGGGGAAAATAAGTAGTACCACATCAGAAACCATGTTATCA GAAGAGGTAATTGAGGTTTCTAAGGTTTGATCATGTACAAAACAATGTAGAAGCACTTGAAACAAGTGCTTGTACGGATG TTATTACTTGTATCAAAAGTTTGGATTAGTTTGGAGACTTAACTCTAGTATAGATATATCCAAACTAAATTTTATTCACA AATCATGTATATTTGACAAAATTATTGTTGGCTGGGTTGTGCAGATGATTTTTTATTTTACATCACATTTTAGAGAACGT GGAGAAGTTTTTTTATCCATTAAGTCAAGCCAATATTTTTAAACTTAAAAAATTAAAAAAAATAGATTATGAGTTAGAAA TATTCATGAAGCTTATCCTTGGTAGATATTTTATTTTATATTCTAATTGAGGTGGGCTGGGTATTTTAGGTGATTAATGC TTGAGCCACCACCCAAATCTCCTTCACACGGCCAATGGGAAAATTAATGAATTTATTTAGTAAAAACCTAATTTCGACCC ATTACGGGATAATAGGAACATGATGGCTCATTTGATACGTCGTATCACATCGTATAAGGTTATACAATACATTATGATTT TATCATTGTTTAGTGTAAATATTGTATTGTATAAACTTATCCATCAATTCACTTTTATACTATTAAATGATGAATTATTT AATCCAACATATAGATGTGAGATAAGGTTTAAGAATGTTATGATATTTGAGTAATTTGAAAATATTCAATCCATTGCCAC GGGTCACAACCACCACCATCATCCATCACCACGTCCACACCACCCCCACCACCACCCTCTACCACTGCCACCATCACCAC TATCGTTATTCCCACCACCACCACCATCAACCGCAATAGCTGCCGCCACAACATCACCACCACTACTTCCACCACAACCA CAACTAACTCCACCACAGCCCACATAAGTAGACCTGACACCAAACATGATGATTAATTGGTATGAGATTGTTCTAGTATA AGCTGAGGTTTCTGAGTTATGTAAAACTGATTGTATTAAATAGTTGATAGAAAATGTTTTGTCGCGTGTATGGTTATAAA AAAAAGTAGGCTTAATGGTCAAATTGGTCCTTGTGTTTATAATGACTTTTGGTTTTAGTCCCTCCACGAAAATAACTAGT CGAAATCTCCCTGCAGTTGCAAGCACTTTTGTTCAAGTCCTCACCGAAGGGTGGAGCTCCGGTGAGGCCCCACCTGACAC G
Download Genomic Sequence

CDS sequence (LotjaGi5g1v0048400.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGACTACTAAAAGGGTTACATGGAAGTCTATGAACTTGATCCTGAGCTGTTACAAGACTAAGTTCCCATTGGAGGATTC TGAGAAACGGGTTTTGAAACAAGGATCATTCCAGAGGTTGTGTCTATCTGATGTAAGCAACTCAAGCTCTACTCAAGCCA TTGAAGATCTTTCAGTTTCATTTGGTGGTTCAAAACTTTATGCATTCACACTTGAGGAGCTGAGAGAGGCAACAAGAAAT TTCTCATGGAGTAACATGCTTGGTGAAGGAGGGTTTGGACCTGTTTACAAGGGCTTTTTTGATGACAGACTCAGGCCTGG TTTGAAGGCTCAGACAGTGGCTGTGAAACAATTGGACTTGGATGGCTTGCAAGGTCACAGGGAGTGGCTGGCAGAGATTA TATTTCTTGGACAGCTAAGGCATCCACATCTTGTTAAGTTAATTGGGTACTGTTATGAGGATGAAAACAGGCTATTGGTG TATGAATACATGCCAAGAGGCAGCTTGGAGAATCAACTCTTCAGAAAATACTCTGCTGCCATGCCATGGTCTACAAGGAT GAAAGTTGCATTAGGTGCTGCTAAGGGGCTAGCTTTTCTTCATGAAGCAGATAAACCTGTAATCTACAGGGATTTCAAAG CTTCAAACATCTTGCTAGACTCAGACTATACAGCTAAACTCTCAGACTTTGGTCTTGCTAAGGATGGCCCTGATGGGGAA GAAACACATGTAACAACGCGCATCATGGGAACACATGGCTATGCCGCTCCTGAGTACATCATGACAGGTCACCTTACAAC CAAGAGTGATGTGTACAGCTATGGAGTTGTTCTGCTGGAACTGCTGACAGGAAGAAGGGTAGTGGAAAAGTCCCAGTCGA ATCGAGGGAGGAGCTTGGTGGAATGGGCAAGACCTATGCTGAGAGACCAGAAGAAGCTGCACCGGATCATAGACAGAAAA CTTGAAGGCCAATTTCCATCCAAAGGAGCCATGAAAGTTGCTATGTTGGCTTTTAAATGCTTGAGCCACCATCCAAATCC AAGGCCCTCCATGAGTGATGTGGTGAAGGTTTTGGAGCCACTTCAGGACTTTGACGATGTTCTCATAGGGCCATTTGTGT ATGTCGCTGTCAATGAAAACGGCGACAAGGATAAAATATAG
Download CDS Sequence

Protein sequence (LotjaGi5g1v0048400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MTTKRVTWKSMNLILSCYKTKFPLEDSEKRVLKQGSFQRLCLSDVSNSSSTQAIEDLSVSFGGSKLYAFTLEELREATRN FSWSNMLGEGGFGPVYKGFFDDRLRPGLKAQTVAVKQLDLDGLQGHREWLAEIIFLGQLRHPHLVKLIGYCYEDENRLLV YEYMPRGSLENQLFRKYSAAMPWSTRMKVALGAAKGLAFLHEADKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPDGE ETHVTTRIMGTHGYAAPEYIMTGHLTTKSDVYSYGVVLLELLTGRRVVEKSQSNRGRSLVEWARPMLRDQKKLHRIIDRK LEGQFPSKGAMKVAMLAFKCLSHHPNPRPSMSDVVKVLEPLQDFDDVLIGPFVYVAVNENGDKDKI
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR45621:SF80
5 384 380 1.9E-249 –
PANTHER
PTHR45621
5 384 380 1.9E-249 –
Gene3D
G3DSA:3.30.200.20
42 163 122 6.4E-34 –
SUPERFAMILY
SSF56112
58 359 302 9.23E-82
IPR011009
ProSiteProfiles
PS50011
81 362 282 38.676
IPR000719
Pfam
PF07714
83 358 276 2.5E-49
IPR001245
CDD
cd14066
87 361 275 5.04661E-94 –
Gene3D
G3DSA:1.10.510.10
164 367 204 1.1E-61 –
ProSitePatterns
PS00108
207 219 13 -
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0048400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…