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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0108400 |
| Transcript ID | LotjaGi5g1v0108400.3 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ABC transporter G family member; TAIR: AT5G06530.1 ABC-2 type transporter family protein; Swiss-Prot: sp|Q93YS4|AB22G_ARATH ABC transporter G family member 22; TrEMBL-Plants: tr|A0A0R0KYN1|A0A0R0KYN1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0108400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:20649113..20652985) extracted from Lotus japonicus Gifu genome v1.2.
GGTCAGATAATCAGATTCAGTCTTGTACAAAGTTTTCATTTCAAATGACATCAATGTACAAGACTAACCCTTCTTCTAGT TGACCAGAAATAGATTGACCAGAATAGATTAATAGTACCATAGATGCAGTATATCCCCCACCTTGGTAGTTAAGAGTCCG TTTAGTTTACCATTAGAAAATATGAAAACGAAAAAATAACACATCATGATGCTCTTTTTATGGCACTTGATGAATTGTAT TCTTATTCTTGAATCTGCAGTTCACAGAAGTGACCTACAAGATAGTGATAAAGGGCATGACAACAAGTGAGGAGAAGGAT ATCTTGCATGGGATCACAGGTTCTGTAAATCCAGGAGAAGTTCTGGCATTGATGGGTCCCTCAGGAAGTGGAAAGACAAC TCTGTTAAATCTCCTCGGAGGCAGGATAAGTCACCCCACAGTTGGTGGTTCTATCACTTACAATGACCAATCATATAACA AGTTCCTCAAGAGCAGGTAAAATTCCAAATTTCCTAGAGAATCTAGTCAGAAAATAAACTAAGTGGAATGTAGTCATAGG TTCTAGTACTGAAAACAGTCACTTCTATAAAAACATAGTAAGACTCTACAATAGACCAAGTGGTCGGACCTTTCACTAGA CTCTGCAGTCTGCACATAGCAGGAGCTTTCGTGAACTGAGTTGCCCTTATTTTATCAATAAGATAGAAAATGGTGTTTGT GAATGTATCACCATAATTTTGTCTAATTGGACCAAAAATAAATTCTTCTAAAAATAGTACTTGCATTTGTTTCTTATCGT GTACAAAAAGTGACTTAGTTTCCCCTATATATATTGTACCAGGATAGGATTCGTGACACAAGATGATGTTTTGTTTCCTC ACCTAACTGTGAAAGAGACATTGACCTACGCGGCTCGTCTAAGACTGCCAAAGACATTCACAAAGGAGCAAAAGGAAAAA AGAGCTTTAGATGTCATCTATGAGCTTGGCTTGGAGAGGTAAATACTAAATAGTTCCTTCCATAATAATGAATGGCGAAA TAATTGTGAGCACAAGAGTTAGATCTTGCTTAATTATACTACAAGCTAATACTAGTTATATATATATATATATTATGTCA CAAAAGGTGCCAAGACACTATGATTGGTGGTTCCTTTGTTCGCGGAGTATCTGGTGGAGAAAGAAAGAGAGTTTGTATTG GCAATGAGATCATAATCAACCCTTCTCTTTTGTTTCTTGATGAGCCAACATCTGGTTTGGATTCTACAACAGCCTTAAGG ATCGTTCAGATGCTGCAAGACATAGCAGAGGTATATGTTTACATTTCTTCAGGAATCCCACATTCACGCAGTCACGCAAT AAGATCTGTCGGCTCAGAATTTAAATTTATATCTACTGTCAGATCTTTATGAAATATATGAACCAACTGAACTTGATTGA ACGGTTCAAATTGCGTGACTGCGTTAATACATGGTATCCCTGATTGCTAGGAACCCGGATGCCTAAACTTCTAATCTTCT ATCACTAACCTGTATAATTTTATGGTAGGCTGGTAAAACAGTAGTGACAACAATTCACCAACCATCAAGCAGACTCTTTC ACAAATTTGACAAGTTAATCCTTCTTGGGAAAGGGAGCTTGCTCTACTTTGGAAAAGCATCAGAAGCAATGAACTATTTC CAGTCCATAGAATGTTCACCACTAATTCCAATGAACCCAGCCGAGTTTTTGCTAGACCTTGCTAATGGAAACATAAGCGA TGTTTCCGTACCATCAGAGTTGGAGGATAAAGTGCAGATGGGAAATGCGGAAGCTGAAACACATAACGGGAAACCATCAC CAGCAATTGTACATGAGGTAACTTTTCCTTATTCATTTGAAACTATATTAGACATTGGGAAAATTTTGGAGTGAGTCTAT ATATTGTTTTCATAAAGACAAGAGTTTTGTATAGGTTTTCATGATATAAGCAAGGATTTGTCTTGGATTTTAGTATTAGT CAAGTAGAAAGGATTTTGAGAGAAGAAAATTTCCTATGTTCTAATGATTAATTTTTAACAGTATCTGGTGGAGTCGTATG AAGCTCGGGTTGCAGAGAAAGAGAAGAAGAAAATAATGTCATCTGTTCCCCTTGATGAAGCATTGAAGTCTAAAGTAAGT TCTAAAAGGCAATGGGGAGCAAGTTGGGATGAACAATACTCGATATTGTTTTGGAGAGGAATCAAAGAAAGGAGACATGA TTACTTTAGCTTGTTGAGAATCACCCAAGTTTTATCCACTGCAATCATCTTAGGATTGCTCTGGTGGCAATCAGATACTA AGAACCCAAAAGATCTGCAAGACCAGGTAAACTAGCATTTCTACTACAGAAAAATTGCTAGTCAACTATAACTTGAAAAT ATATCTCTACAAGCACCACTCAAACATGTTTTTACCAAGTTAAATACTTGGTAGGGAAGAGGGTGAGCCTCGGCGCAACG GTAAGGTTGCTGCCAGCCATGTGACGGTCACATGTTCGAACCGTAGAATCAGCCTCTTGCAAAAATGCAAGGTAAGGTTG CCTATGTTAGATTCACAAAGTGGACCCGGCCCTCCCCTAGACCTCGTGCATAGCTAGAGCTTTATTGCACCAGGTTTGTC CTTAAATCCTTGGTAGGGAGAGCTTTGCCACCCATAATGGACTTACCCAGCTCTAGCAGGATTGCCTCAGTGGCGGATAC CTGTGTTTTAAACAATACCAAACAACAAAAAATATTTTTACAAGCATGAGGTTTATAATTTTTAACTTAACTGTTAGCAT GTTCAACTTTCTGGATTGCAGGCAGGGCTTCTTTTCTTTATTGCTGTCTTCTGGGGATTCTTTCCTGTTTTTACTGCAAT ATTCACATTTCCTCAAGAGAGAGCCATGCTGACTAAGGAAAGAGCAGCAGACATGTACAGACTAAGTGCATATTTCCTGG CTAGGACTACAAGTGACCTTCCACTAGATTTGATACTACCAGTGCTTTTTCTAGTTGTTGTTTATTTCATGGCTGGTCTG AGACTGAGTGCAAGCCCTTTTTTCCTCACAATTCTTACTGTTTTCCTCTGCATTGTGGCAGCTCAGGTATATGCATTTCA GAAACAGCAAAGTAATAAAAACAAAAAAAGTGAAATAGGCTACTGTTCTGACAATGGTTGGTTGTGATGATGCAGGGACT TGGACTTGCTATTGGGGCTACACTTATGGACTTGAAAAGAGCAACAACTTTGGCTTCAGTGACTGTCATGACCTTCATGC TGGCTGGAGGATTTTTTGTACAGGTAAACAAACATACTTGTTTTTGTATGGAACACAAAACAATTCATTGCCTTACATTT TGGGGACAAGTGAACAAATTGATCTTGTGAATTAGATGTGAATGAAGTTTTCCTTCATTCAAAGGTTGGAAATACTAAAT CACACCGGGTAAATACTAAATCTTTAGTAGTCTCATAGTACTGAAGACTCGGTACTCCTATTCGCATAAACATTCAGTAA TGAAACATGTGCGAACATTAGAATGAAAGGAGTAGGTACTACAGAAGTACGGTAGATTTTTTCAATCAGCTTGACATGAA TAACTTTTGCCATGTTTTAATAGAAGAATTTAACACGTGATCCTAAATATTTTGCAGAAAGTCCCAATATTCATCTCTTG GATCCGGTACATGTCTTTCAACTATCACACCTACAAACTTTTGCTGAAGGTGCAATATGAACACCTCACGCCTAGCGTAA ACGGGATTAAAATTGACAGTGGTAAGACAGAGGTGGCTGCTTTGATTGCCATGGTTTTTGGTTACCGTTTCTTGGCATAT CTTTCTTTGCGCCGAATGAAACTTCAATCTTGA
CDS sequence (LotjaGi5g1v0108400.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACAACAAGTGAGGAGAAGGATATCTTGCATGGGATCACAGGTTCTGTAAATCCAGGAGAAGTTCTGGCATTGATGGG TCCCTCAGGAAGTGGAAAGACAACTCTGTTAAATCTCCTCGGAGGCAGGATAAGTCACCCCACAGTTGGTGGTTCTATCA CTTACAATGACCAATCATATAACAAGTTCCTCAAGAGCAGGATAGGATTCGTGACACAAGATGATGTTTTGTTTCCTCAC CTAACTGTGAAAGAGACATTGACCTACGCGGCTCGTCTAAGACTGCCAAAGACATTCACAAAGGAGCAAAAGGAAAAAAG AGCTTTAGATGTCATCTATGAGCTTGGCTTGGAGAGGTGCCAAGACACTATGATTGGTGGTTCCTTTGTTCGCGGAGTAT CTGGTGGAGAAAGAAAGAGAGTTTGTATTGGCAATGAGATCATAATCAACCCTTCTCTTTTGTTTCTTGATGAGCCAACA TCTGGTTTGGATTCTACAACAGCCTTAAGGATCGTTCAGATGCTGCAAGACATAGCAGAGGCTGGTAAAACAGTAGTGAC AACAATTCACCAACCATCAAGCAGACTCTTTCACAAATTTGACAAGTTAATCCTTCTTGGGAAAGGGAGCTTGCTCTACT TTGGAAAAGCATCAGAAGCAATGAACTATTTCCAGTCCATAGAATGTTCACCACTAATTCCAATGAACCCAGCCGAGTTT TTGCTAGACCTTGCTAATGGAAACATAAGCGATGTTTCCGTACCATCAGAGTTGGAGGATAAAGTGCAGATGGGAAATGC GGAAGCTGAAACACATAACGGGAAACCATCACCAGCAATTGTACATGAGTATCTGGTGGAGTCGTATGAAGCTCGGGTTG CAGAGAAAGAGAAGAAGAAAATAATGTCATCTGTTCCCCTTGATGAAGCATTGAAGTCTAAAGTAAGTTCTAAAAGGCAA TGGGGAGCAAGTTGGGATGAACAATACTCGATATTGTTTTGGAGAGGAATCAAAGAAAGGAGACATGATTACTTTAGCTT GTTGAGAATCACCCAAGTTTTATCCACTGCAATCATCTTAGGATTGCTCTGGTGGCAATCAGATACTAAGAACCCAAAAG ATCTGCAAGACCAGGCAGGGCTTCTTTTCTTTATTGCTGTCTTCTGGGGATTCTTTCCTGTTTTTACTGCAATATTCACA TTTCCTCAAGAGAGAGCCATGCTGACTAAGGAAAGAGCAGCAGACATGTACAGACTAAGTGCATATTTCCTGGCTAGGAC TACAAGTGACCTTCCACTAGATTTGATACTACCAGTGCTTTTTCTAGTTGTTGTTTATTTCATGGCTGGTCTGAGACTGA GTGCAAGCCCTTTTTTCCTCACAATTCTTACTGTTTTCCTCTGCATTGTGGCAGCTCAGGGACTTGGACTTGCTATTGGG GCTACACTTATGGACTTGAAAAGAGCAACAACTTTGGCTTCAGTGACTGTCATGACCTTCATGCTGGCTGGAGGATTTTT TGTACAGAAAGTCCCAATATTCATCTCTTGGATCCGGTACATGTCTTTCAACTATCACACCTACAAACTTTTGCTGAAGG TGCAATATGAACACCTCACGCCTAGCGTAAACGGGATTAAAATTGACAGTGGTAAGACAGAGGTGGCTGCTTTGATTGCC ATGGTTTTTGGTTACCGTTTCTTGGCATATCTTTCTTTGCGCCGAATGAAACTTCAATCTTGA
Protein sequence (LotjaGi5g1v0108400.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTTSEEKDILHGITGSVNPGEVLALMGPSGSGKTTLLNLLGGRISHPTVGGSITYNDQSYNKFLKSRIGFVTQDDVLFPH LTVKETLTYAARLRLPKTFTKEQKEKRALDVIYELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPT SGLDSTTALRIVQMLQDIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKASEAMNYFQSIECSPLIPMNPAEF LLDLANGNISDVSVPSELEDKVQMGNAEAETHNGKPSPAIVHEYLVESYEARVAEKEKKKIMSSVPLDEALKSKVSSKRQ WGASWDEQYSILFWRGIKERRHDYFSLLRITQVLSTAIILGLLWWQSDTKNPKDLQDQAGLLFFIAVFWGFFPVFTAIFT FPQERAMLTKERAADMYRLSAYFLARTTSDLPLDLILPVLFLVVVYFMAGLRLSASPFFLTILTVFLCIVAAQGLGLAIG ATLMDLKRATTLASVTVMTFMLAGGFFVQKVPIFISWIRYMSFNYHTYKLLLKVQYEHLTPSVNGIKIDSGKTEVAALIA MVFGYRFLAYLSLRRMKLQS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 233 | 233 | 20.262 | ||
| Phobius | 1 | 346 | 346 | - | – | |
| Gene3D | 2 | 229 | 228 | 1.1E-60 | – | |
| PANTHER | 5 | 577 | 573 | 0.0 | – | |
| PANTHER | 5 | 577 | 573 | 0.0 | – | |
| SUPERFAMILY | 6 | 225 | 220 | 7.8E-49 | ||
| Pfam | 10 | 161 | 152 | 5.5E-28 | ||
| SMART | 19 | 210 | 192 | 4.8E-12 | ||
| ProSitePatterns | 133 | 147 | 15 | - | ||
| Pfam | 327 | 536 | 210 | 9.4E-42 | ||
| TMHMM | 345 | 364 | 20 | - | – | |
| Phobius | 347 | 367 | 21 | - | – | |
| Phobius | 368 | 378 | 11 | - | – | |
| Phobius | 379 | 401 | 23 | - | – | |
| TMHMM | 379 | 401 | 23 | - | – | |
| CDD | 380 | 527 | 148 | 0.00369638 | – | |
| Phobius | 402 | 434 | 33 | - | – | |
| TMHMM | 422 | 444 | 23 | - | – | |
| Phobius | 435 | 453 | 19 | - | – | |
| Phobius | 454 | 458 | 5 | - | – | |
| Phobius | 459 | 483 | 25 | - | – | |
| TMHMM | 459 | 481 | 23 | - | – | |
| Phobius | 484 | 494 | 11 | - | – | |
| TMHMM | 493 | 515 | 23 | - | – | |
| Phobius | 495 | 518 | 24 | - | – | |
| Phobius | 519 | 554 | 36 | - | – | |
| Phobius | 555 | 573 | 19 | - | – | |
| TMHMM | 555 | 573 | 19 | - | – | |
| Phobius | 574 | 580 | 7 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. |
Expression pattern of LotjaGi5g1v0108400.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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