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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0269000 |
| Transcript ID | LotjaGi5g1v0269000.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ABC transporter G family member; TAIR: AT3G25620.2 ABC-2 type transporter family protein; Swiss-Prot: sp|Q7XA72|AB21G_ARATH ABC transporter G family member 21; TrEMBL-Plants: tr|A0A151SDY3|A0A151SDY3_CAJCA ABC transporter G family member 14; Found in the gene: LotjaGi5g1v0269000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:58205754..58211627) extracted from Lotus japonicus Gifu genome v1.2.
GCAAAACTAAAACAGTATCAGCAGATGGTGGTGATCTCTGTCTTGCTTAGACTATATATTGTTATTGTTATATCATCATT AAATCACACATCTTCATTCGTGTGCTTCTCGTGCCCTTTCCTCACTTTATACCTGTTCTTTCATGTGACTCCTCTTCTAA CATCTCCTTCTCCCTCATTCAATTTTGAACACCATTATCTTCATCTATACTCTGCTTCTTCATATTCTTCCTAGTTCATT CAATTAATTCTTCTCAACTTTCCTCAACAAACTTCATAAATCAAGATGATGCCCCCTGAGCAAGAAACCAATATTGCACC CAACAATATCCAAGCCATCACAAACCGACCTGAGAACAACGAATCACCAGAGGGTTCTTCTTCAACTAACAAGGTAAAAC CCAGCTCCGATGACAATGGTAGTTCTCCAAAGTTTCAACCTCATGATCCAATAACAACCCCAACAACATCATCATTTTCC ATTCTTCATCAATCCTTGCGTCCTGTCACTCTCAAGGTACTCATCATTAATACTCTCTCTTCCATCATATCATGAAGAGT CTATTTGCATACAGACAAATAAGCATTTCCCAGTTTTTCTCTCCATAAAAATAGACTAAATAAGCAATAATAAGTACTCT TTAATCCGCATATGGTGGCTCTAATTCACATAATGAGATTGCTTAACTTCCCTAAGTAAGTTAATTAGAAAACTATATTA AAATCTCAACAAAACTTTTCTCTTTGCTATGCAAATTCCTTAAACGCAGAGAAGACAATGAGACTGTTTGGATGCGGATA GAAAACATTTATTAAAATTTATTAAGTGTTTTTTATAGTAGATAAGCTCCAAAATGCTCTTGACTATGTAAATGTTCAAA ATGGCCCAAAGAGGTACTTAGTTTTGCATGAAATGGATATGTTTGCCTATCTTTGAAATTGAGGCCATTTTTCGTTCCTG TGTCTTTGTTTTGTAGTTTGAAGACGTTTCATACAGCATAACCTTGCAAAGTCAAAAGAATAAAGGATGTGTTCTTCCAA AAGAGGCAAAAGTAACCAGAAGACTCCTCAGCGGCGTGACGGGGATAGCGAAACCCGGCGAACTGACGGCAATGTTGGGC CCCTCAGGGAGCGGCAAGACCACCCTCCTCACCGCCCTCGCCGGAAGACTCACTGGAAAAGTCTCTGGCACCATAACCTA CAATGGAAACCCGGACCCCACCTGCATGAAGCGCAGGATCGGGTTCGTATCGCAAGACGACATCGTCTACCCTCATCTCA CCGTGCTTGAGACGCTCACCTACACCGCCCTACTGAGGCTACCAAATAGCCTCACTAGGGAGGAGAAGGCAGAGCATGCA GAGAGGGTGATTACGGAGCTTGGATTAACACGATGCCGGAACAGCCCCATCGGCGGGTGCATGGGGGTTTTCCGGGGAAT CTCCGGCGGGGAGAGGAAAAGGGTGAGCATTGGGCAGGAGATGTTGGTGAACCCGAGTTTGCTGTTGCTGGATGAACCGA CGTCCGGTCTGGACTCGACAACGGCTCAGCTTATCGTTTCGGTTCTCCGAAGGCTCGCCCGAGCTGGTCGAACCGTGCTT ACCACCATTCACCAACCGTCGAGTCGGTTGTACCGGATGTTTGATAAGGTTGTGGTGCTTTCTGACGGGTGCCCCATTTA TAGTGGTAATGCAGGTCGGGTCATGGATTATCTTGAGTCGGTTGGTTATATGCCCGCTTTCAACTTTGTCAACCCGGCTG ATTTTCTTCTTGACCTTGCTAACGGTAAGTTATTTGTCAATAGAATTAGCCTAATTCACATCATAGATAAAATTCATATA TATAAGTTTTCAATGAATATCTCATTTACATTTCTTTGTTAAACATATTCGCTTCAGTTGGTTAGAACGAGTCACTTCCC CATAGAAGGTTGTGTGTTCAATTCTCGCTGCCAATATGAGGGTAAGATTGGTGAGTGATTTGAAGTATCTCTATGAGCGG CCTATGGTCTTGGAAACATGGTCTGACCCGTGATTGTCACCAAAATCGAACACACAACCCAAACTTTTATTCATAGATAT TTATGTTTGATGTATACTATTTTGGTTAAACACCTAAAGTAAGATAAGAAGAAAAGATAGATAAATGATAGAGGACGCAT CCATAATTTTATTATTGGGTCGCAACAAAATACGAAAAAATTTAATTTTTTTGGGATAAACTAAGGATTAAAAAATTGTA TATAAAGTTACATAAAAAAAAAATCAAATTCTCAAGGTGTAGTGGCCCTTGTCTGCTCCTCTTAGATGCACTCTTGATTA TAGATGTGATATATGATATGATGTATTAGATAATTAAAAATAAAGAGAAAAACATTGATGCTTGTGGGTGTCGATATTGT TTTGTGATCTATCCATAAATCTATTTAAAAATTAAAAAGAAAAAGGTATGGTGGAATATATGTGATAAAGAAAATTGTAA AGTGAAATGTAATAAAAGATAAAGATATGATGGAGATTATATAAGAGATAAAGAAAGTTGTAAAGTAAATGTGATGGCCC AAATTTATTGTAGAGATATTATTAGATCCTCTTCCATCATCAAAATGCTTTCCCTTTCTCTATTCAAATCTTAATCATAA GTTTATGTACAATAATAGTCCGAGAACACAACACACTTCATCATCTACAAGTTGTTATCAGACTTTTTACCGAGATGCAA TTGAAAAGATACAGTGAGCTGTGCAATTGAAAAAATGTTAAGGAGAAATAAGGTAAAGAAAAATCATGGCACATGTGGCA AATAGGATCAAGGTGGAAAAGCTGATGTGTAAATTATTAAATGTGAATTAATAGGTGGACAAGCTGACGTGTAAATAATT AAGTGAGAATTAATCTCGGAGCGATACGTCACGAACTTGGCCTGTGAGAGCGACACGTAATGCTAAAAGTTATTCTTTTT TAATATATTTTGATATTGATATTGATTATAATGTTTCATGTTTGTGAATTTTTATCAAGAGAATATTTATTCTCGTATTT CTACAATGAGAAGGGAAAGTTTGTGATTTTGTGCATGTCAACTTCATGAAACAAAAGTGACCCCATGTGCGTGATATTTA GAGAGGGAGTTCAACACTTGTCGTTAATTGTAAGGTGATGGCTCATTTTCAAATTTTTGATAATGGTGGTCAAAAGGGTT GAGCTTTTACTCTGAAAACCCATGCAAGGTGGCAAGAGATAATGCGTCATTAGCAGCAGTAAATTGAAAAGACACTGTTG CTAAAAGAAATCCCTCTTTGCCTTGGGCCAGTTTCACAACATGTGAGATTTCTTTTGTGTTGTCATAGATCAACACAAGA GAAACTTAACAAGTGTTGTAAGGTGCTTGGAATAATGTCACATATTGTCTTACTTTCAAAAGAATTTTGTGATTGGTGGA ACAATTTTCCTAACAACAATTAGTAGTATGTTGGTTCTACAGTGAAATGTTCTTGAATCACTTCTGATTAGAAACTATAA TTCTTAGATTTTAAGTAAACATACATTACTAAAACATCCTTAGAGTGTCACAAGCCATGTATGACAATTCACAAGTTCAT CCTAATTTTAAAATTAGATGAGAAATCAAACTCAGTTCCCTAGAATTGGACAAGATATCTGAAGACAAAAACAACAATAG TGGAAGCATCTTCAAGCATGGTTGATGATTGTCCTTGGATTTCTCTAATATTTGGTTATAGGCCTGAGACTTGGGTGAAT TTGCATTAAATTTCTTGAGAGAGATGCTAGTAATCCTTCTCATTCATTAGATTCTGGGGTTTTGCAGGCATAGTTGCTGA TGTCAAACATGATGATCAGATAGAGCACCATGAGGATCAAGCTTCAGTCAAACAGTCCCTAATTTCATCCTATAAGAAGA ACTTATATCCTCTTCTTAAAGAAGAGATTCATCAAAACAACAGTGAGCAAGTAGCTTTCACATCAGGAACAGCTAGACGT GAGTGAAATTAATCTAGCAGCAATGGACAGAGTTATGTTATATTACACCATGGCTAAGTGTGTTCATTTTTCATTCTTGG CAGGTTCTGATAACCAATGGGCCACTAGCTGGTGGGAGCAGTTTAAGGTGCTTCTTAAAAGGGGTTTACAGGAAAGAAGG CATGAATCTTTCTCTGGCTTAAGGATTTTCCAAGTCTTGTCTGTGTCCATTCTCTCAGGACTTCTATGGTGGCACTCTGA TCCCTCACACATACAAGATCAGGTATTGTGAATCTATGTTCTGTTTTTCCTGGGTGAAAATTCAAAAATAAAATGAATAC TTTATAAAGCAAGGTTATTAATTGAGCAACTCAAAATTTCAAGTAATAGAAGGATTAAATTCTTTTGTGCCAATGGTGTC TCAACTTCCTGTTCCACTAACAAAACGTTGTCATGTCGATTAAAAATTTGTAACTACTTCACTCATGTTTTTTTTCAGTT GATATGACAAGATTTCATTATTGGACCGAAAGTTAAGACAAAATTTATAGACAAAATATGTTAATCCGTAATTGGAATCG GATGAAGATCTTGTGCCCTCATTTGGGGTCTTCTTCCCTATCCAGTCCCACCGACCAAATTGAGTCATGTATGTATGAGT ATGGAAATTATATCTTTACGCTGGTGTTTTAAGTGATATGACACAATTTGATTGATCGGATAGAGAAAGAAACACCAAAT GGGATAGAGGGTATCATTTCCTAGTTAATTTGCTTTAAAATTCAATAGAAAGTGGTGAATTGTAGTACTTATAACAACAT AACTCTTGTAACAGGTAGGACTACTTTTCTTCTTCTCCATATTCTGGGGATTCTTCCCTCTCTTCAATGCAATCTTTGCA TTCCCTCTCGAGAGGCCAATGCTAATAAAAGAAAGATCATCAGGAATGTACCATCTCTCCTCCTACTATGTTGCTAGGAT GGTGGGAGACTTACCAATGGAGCTTGTTCTTCCCACTATGTTTGTAACCATCACCTACTGGATGGGTGGTCTCAAACCTT CACTAGTCACATTTGTGTTAACCCTCTTGATCATGCTTTTCAATGTTCTGGTCTCTCAAGGAATAGGCCTTGCATTGGGG GCAATTCTCATGGATGTGAAGCAGGCCACAACACTAGCTTCAGTGACCATGCTCGTTTTTCTGTTGGCTGGTGGTTACTA CATTCAGCAAATGCCTTCTTTTATAGCTTGGTTGAAGTACATTTCTTTCAGCCATTACTGCTATAACCTGCTGGTAGGTG TTCAGTATTCAGTGAATGAGGTGTATGAGTGTGGGAAAGGATTGCATTGTAAGGTGAGAGATTTTCCAGCTATAAGGTGT TTGGAACTTGATGACTTGTGGGGAGATGTGGCTGCATTGGCTGTGATGTTTGTTGGATACAGAGTTGTGGCATATCTAGC TTTGAGGATGGGGCAGCCTCACTGACTAAAGACTTGTATATTAGAGATCATATTATTAATTTTCAAGATTGTATGAATCA TCGCCTCAGTCCATGTTTGTGATTCTTCTACAATTGATTCTAAGTTCAAAATCAATTATGGGGAGAACAAAATTGAGTAG TTCTGGGTAACAGAATTGATTCAGGGGAAATCCAAACATGCTACTAGTTAAATAAGTAGTAATTATTTTGATTCAAATTG GATATAGAATATCTTAAGTACTTTGTGATTATTAGTAGACATTGAAATGAAGCAATCAAAATTTGTAGAAATGTGGTCCA ATTTTTGTTTGGAGAAAAACCAGTTGTATTGTACCACTACATCAAAGAGTGGCTTTGGATCTTTATGGAAATCTAATTAA TGTTGCAACTTAGTACATATAAGCCAGTACATGC
CDS sequence (LotjaGi5g1v0269000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGCCCCCTGAGCAAGAAACCAATATTGCACCCAACAATATCCAAGCCATCACAAACCGACCTGAGAACAACGAATC ACCAGAGGGTTCTTCTTCAACTAACAAGGTAAAACCCAGCTCCGATGACAATGGTAGTTCTCCAAAGTTTCAACCTCATG ATCCAATAACAACCCCAACAACATCATCATTTTCCATTCTTCATCAATCCTTGCGTCCTGTCACTCTCAAGTTTGAAGAC GTTTCATACAGCATAACCTTGCAAAGTCAAAAGAATAAAGGATGTGTTCTTCCAAAAGAGGCAAAAGTAACCAGAAGACT CCTCAGCGGCGTGACGGGGATAGCGAAACCCGGCGAACTGACGGCAATGTTGGGCCCCTCAGGGAGCGGCAAGACCACCC TCCTCACCGCCCTCGCCGGAAGACTCACTGGAAAAGTCTCTGGCACCATAACCTACAATGGAAACCCGGACCCCACCTGC ATGAAGCGCAGGATCGGGTTCGTATCGCAAGACGACATCGTCTACCCTCATCTCACCGTGCTTGAGACGCTCACCTACAC CGCCCTACTGAGGCTACCAAATAGCCTCACTAGGGAGGAGAAGGCAGAGCATGCAGAGAGGGTGATTACGGAGCTTGGAT TAACACGATGCCGGAACAGCCCCATCGGCGGGTGCATGGGGGTTTTCCGGGGAATCTCCGGCGGGGAGAGGAAAAGGGTG AGCATTGGGCAGGAGATGTTGGTGAACCCGAGTTTGCTGTTGCTGGATGAACCGACGTCCGGTCTGGACTCGACAACGGC TCAGCTTATCGTTTCGGTTCTCCGAAGGCTCGCCCGAGCTGGTCGAACCGTGCTTACCACCATTCACCAACCGTCGAGTC GGTTGTACCGGATGTTTGATAAGGTTGTGGTGCTTTCTGACGGGTGCCCCATTTATAGTGGTAATGCAGGTCGGGTCATG GATTATCTTGAGTCGGTTGGTTATATGCCCGCTTTCAACTTTGTCAACCCGGCTGATTTTCTTCTTGACCTTGCTAACGG CATAGTTGCTGATGTCAAACATGATGATCAGATAGAGCACCATGAGGATCAAGCTTCAGTCAAACAGTCCCTAATTTCAT CCTATAAGAAGAACTTATATCCTCTTCTTAAAGAAGAGATTCATCAAAACAACAGTGAGCAAGTAGCTTTCACATCAGGA ACAGCTAGACGTTCTGATAACCAATGGGCCACTAGCTGGTGGGAGCAGTTTAAGGTGCTTCTTAAAAGGGGTTTACAGGA AAGAAGGCATGAATCTTTCTCTGGCTTAAGGATTTTCCAAGTCTTGTCTGTGTCCATTCTCTCAGGACTTCTATGGTGGC ACTCTGATCCCTCACACATACAAGATCAGGTAGGACTACTTTTCTTCTTCTCCATATTCTGGGGATTCTTCCCTCTCTTC AATGCAATCTTTGCATTCCCTCTCGAGAGGCCAATGCTAATAAAAGAAAGATCATCAGGAATGTACCATCTCTCCTCCTA CTATGTTGCTAGGATGGTGGGAGACTTACCAATGGAGCTTGTTCTTCCCACTATGTTTGTAACCATCACCTACTGGATGG GTGGTCTCAAACCTTCACTAGTCACATTTGTGTTAACCCTCTTGATCATGCTTTTCAATGTTCTGGTCTCTCAAGGAATA GGCCTTGCATTGGGGGCAATTCTCATGGATGTGAAGCAGGCCACAACACTAGCTTCAGTGACCATGCTCGTTTTTCTGTT GGCTGGTGGTTACTACATTCAGCAAATGCCTTCTTTTATAGCTTGGTTGAAGTACATTTCTTTCAGCCATTACTGCTATA ACCTGCTGGTAGGTGTTCAGTATTCAGTGAATGAGGTGTATGAGTGTGGGAAAGGATTGCATTGTAAGGTGAGAGATTTT CCAGCTATAAGGTGTTTGGAACTTGATGACTTGTGGGGAGATGTGGCTGCATTGGCTGTGATGTTTGTTGGATACAGAGT TGTGGCATATCTAGCTTTGAGGATGGGGCAGCCTCACTGA
Protein sequence (LotjaGi5g1v0269000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMPPEQETNIAPNNIQAITNRPENNESPEGSSSTNKVKPSSDDNGSSPKFQPHDPITTPTTSSFSILHQSLRPVTLKFED VSYSITLQSQKNKGCVLPKEAKVTRRLLSGVTGIAKPGELTAMLGPSGSGKTTLLTALAGRLTGKVSGTITYNGNPDPTC MKRRIGFVSQDDIVYPHLTVLETLTYTALLRLPNSLTREEKAEHAERVITELGLTRCRNSPIGGCMGVFRGISGGERKRV SIGQEMLVNPSLLLLDEPTSGLDSTTAQLIVSVLRRLARAGRTVLTTIHQPSSRLYRMFDKVVVLSDGCPIYSGNAGRVM DYLESVGYMPAFNFVNPADFLLDLANGIVADVKHDDQIEHHEDQASVKQSLISSYKKNLYPLLKEEIHQNNSEQVAFTSG TARRSDNQWATSWWEQFKVLLKRGLQERRHESFSGLRIFQVLSVSILSGLLWWHSDPSHIQDQVGLLFFFSIFWGFFPLF NAIFAFPLERPMLIKERSSGMYHLSSYYVARMVGDLPMELVLPTMFVTITYWMGGLKPSLVTFVLTLLIMLFNVLVSQGI GLALGAILMDVKQATTLASVTMLVFLLAGGYYIQQMPSFIAWLKYISFSHYCYNLLVGVQYSVNEVYECGKGLHCKVRDF PAIRCLELDDLWGDVAALAVMFVGYRVVAYLALRMGQPH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 435 | 435 | - | – | |
| MobiDBLite | 1 | 64 | 64 | - | – | |
| PANTHER | 6 | 676 | 671 | 0.0 | – | |
| PANTHER | 6 | 676 | 671 | 0.0 | – | |
| MobiDBLite | 7 | 64 | 58 | - | – | |
| CDD | 73 | 314 | 242 | 3.43292E-81 | – | |
| ProSiteProfiles | 76 | 332 | 257 | 19.908 | ||
| Gene3D | 101 | 329 | 229 | 1.8E-57 | – | |
| SUPERFAMILY | 105 | 326 | 222 | 2.26E-47 | ||
| Pfam | 110 | 260 | 151 | 1.2E-24 | ||
| SMART | 117 | 309 | 193 | 8.2E-12 | ||
| ProSitePatterns | 232 | 246 | 15 | - | ||
| Pfam | 415 | 621 | 207 | 4.5E-40 | ||
| TMHMM | 433 | 455 | 23 | - | – | |
| Phobius | 436 | 454 | 19 | - | – | |
| Phobius | 455 | 465 | 11 | - | – | |
| TMHMM | 465 | 487 | 23 | - | – | |
| Phobius | 466 | 488 | 23 | - | – | |
| Phobius | 489 | 507 | 19 | - | – | |
| TMHMM | 508 | 530 | 23 | - | – | |
| Phobius | 508 | 534 | 27 | - | – | |
| Phobius | 535 | 539 | 5 | - | – | |
| Phobius | 540 | 567 | 28 | - | – | |
| TMHMM | 545 | 567 | 23 | - | – | |
| Phobius | 568 | 573 | 6 | - | – | |
| TMHMM | 574 | 596 | 23 | - | – | |
| Phobius | 574 | 593 | 20 | - | – | |
| Phobius | 594 | 654 | 61 | - | – | |
| TMHMM | 651 | 673 | 23 | - | – | |
| Phobius | 655 | 673 | 19 | - | – | |
| Phobius | 674 | 679 | 6 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. |
Expression pattern of LotjaGi5g1v0269000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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