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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0280900 |
| Transcript ID | LotjaGi5g1v0280900.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein disulfide isomerase-like protein, putative; TAIR: AT1G35620.1 PDI-like 5-2; Swiss-Prot: sp|Q94F09|PDI52_ARATH Protein disulfide-isomerase 5-2; TrEMBL-Plants: tr|A0A072VPJ1|A0A072VPJ1_MEDTR Protein disulfide isomerase-like protein, putative; Found in the gene: LotjaGi5g1v0280900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:59642704..59647525) extracted from Lotus japonicus Gifu genome v1.2.
TCGAAGAAGATGAGGGTTTTGTTGGCTTCTTGTGTTGCGTTGTTGATCCACTTTTGCAGTGCTTCTGAACCACTCTCGGT GGATGGCACGGTGTTGGTACTCGACGAATCCAACTTCGATTCCGCTATCTCCTCCTTCGATCACATCTTGGTTGACTTTT ACGCTCCCTGGTGTGGCCACTGCAAGCGTCTCTCTCCCGAGGTACCACCATCTTCTCTTCCATTCCTCTCGTCTAATGAT TGTGCTGTTTTTCAACTTTCCATTTTTGTCCCAAACCCACTTGCAAAATTCCCCCTTTATTGTTCATATTTGCTTTTGGT TGGTTCCTGAATGTGAGGTCCAATTTTTAGAAACTGGGTATTCATGGTTTGTTTTTGGGTATGTAAGCATGTCTTGATAA TAGTGGATATGATTGGTGCCCTTTTGGAATTGTTATGTGCATGATCATCAAGGATAATGCATATTTTCAATGGCTTGGAT TATGGTTTATGAGTATTAGTTGTTAATGTTACATCACTGATTGTTCTTATTAATTTTTAACTTCATAAAATGTTTCTGAG ATATAAATAGACTTGTTAGTTACCCAAGACGGGTAGCTTAGTTGGCAACGCAGGCTGAGTGTGTGGGAAGAGCTCTCGGG TCCGATCCCCACACAATACACTCTAGGAGAGGGATGAGGAGCCTTAATTGTGACTAAATCCTGAATCTGGCGGCATCCAA AGGGTGACCGGGTACCGGATGTTAATACTAAAAACAAAATAGGCTTGTTAGTTTTAATGGTACATTGCCATTGGTATTTA GTTTTTTTTTATTTGATATTCTTGAGTGTCATTTATGTTTCATTTAATGTGAGGATAAAAAATGTGATTTTCTACCTCTC AGTTAGATGCAGCTGCCCCTGTACTTGCAGCCTTGAAGGATCCCATAGTCATAGCAAAAGTAGATGCAGACAAGCATACC CGCCTTGCTAAAAAACATGATGTCGAGTATGTTTCTTTGGCTCTGTTTAGTCATATCGTACCCAAACATTATGCACCTAT AACTGGAAATGAACTTATGCTAAACTTCTATTTTGTGATGCAGTGCGTATCCAACCATTCTTCTGTTTAATCACGGTGTA CCCACAGAATACCGTGGACCAAGGAAAGCAGATGTACTTGTTCGTTATCTAAAGAAATTTGCTGCTTCTGATGTTTCCGT TCTTGATTCAGATTCTGCTGTGAACAATTTTGTTGAAGAAGCTGGCACTTTTTTCCCATTATATATAGGTTTTGGGCTGA ATGAGTCGGTAATAGAAAAGTTAGCCATAAAGTATAAGAAAAATGCATGGTTTTCTGTGGCTAAGGATTTCTCAGAGGAT CTTATGGTATTGTATGACTTTGATAAGATTCCTGCATTGGTTTCTCTTAATCCACAGTTCAATGAGCGGAGCACATTCTA TGGCCCCTATGAAGGTTAGTTATATCGTACATAATCAAAGACACTTAGTATTTCATTTACTTACAAGTTATTCCTTCTCA TTTAAACTAGAAGTCTTGAAGACATTGTTAATTGTATTTTAAGATAGTGTTTAAGCTTTGGAGAAGTCCTTTTTCTACTT TTTGGTTTGTCTGGATATTTTTGTAGCATCAGTACTCACTATCCTGGTTTTACGAGTAATATAAAATTGAAAGGCTCTAT GGAACTAAACTCTGTTTTTAAATGTTTGATGCCTTTATGTTGACTGAATTGTAGTAGAACTCGTAGCCACAACTTGTGTC TTTGCAACTTTTATGGGATAGTGTAACTTTTATAGCTTCTCTATGTATTTATGCTATTGGTTTCTTTGGCCTAGATCAAA TTATCTTATAAATTAAACAGGATTTGACAAAATTAACTATGGAACTTAACTGAAGCTGCAATCTAACCTTAAACATATAA TATAATAGGTTCATCCGGAAGGCCTTTCTTGTTTCAGGGTAGGAGCTAACGTAGGTTTTAGAACTTGAATACTATGATGA TGGTTTTCTTACTTCTAAAAAAGACCGGAGCTTGAATGTCTATTATTAGGGCTTGTTTGGGTAAACAACAAACTTTAGCA CGCATCACATGACTTTCATTAGCTTCTGCAACTTCCACATAAGCTATACGTTTTTTCAACTTCCCCACAAGTTGATTTTC ATAAGCTTATTTGAGAAGTTTATTGAAATAACCTCAAAAGAACTTATTGGTAGGTCTTAAGTTATTTTTATAAACATAAA CAAACACTTGCTTAAATAATTATGTCATGAGATTCGCCCAAATAAGCTCTAGAAAAGCTCGTTTTCTTTCTTCATCAGAA GTTATTATTATGTTGTGATCTTATCAGTGCTTCTTGAATTATGTATATATATTTTGCCCTTTACATTTTGTTATTTTGGA ATATATTCACTTTTCTTCATATGCTACTTCATTGTTTTAACTTTAACACATCATTACAGGAACCTTTTGATGAGTTATTT TTGTTTTCATAAAGCAGAGAACTTTTTGGAAGATTTTGTAAAACAAAACCTGATTCCTTTGGTCGTGCCAGTTTCCTATG ACACACTTAAGTTGATGAAAGCTGATGGTAGGAAAATAGTTTTGACAATTGTGGAGGATGAAAATGAAGAAAATTCAAAG GAACTGATTAAGTTATTGAAGGGTGCTGCATCTGCAAATCGTGACTTAATATTTGGTTATGTTGGAGTTAAACAGATGGA CGAATTCGCTGACAAATTTGATACCAGTACTAAACTACCAAAGATGGTCATTTGGGATAAAAGTGATGACTACCTTTCTG TAAGTTAATGGTCTACTAGAGTTTTTTATTTTTATTTTAGTTTGTCCCAATCGTACTTCTCTAAGTGATATGTGGTCTCT ATTTGTCTTGCATACATGCCTAGGTTCAAAGTTCTTCTTCCCCCTTATTCTAGTACTCCATTTTGCATGTCTTATTCTTG TCAATTTTGATCTATATGTATATTCTTGTGTATTTTTTAGATGAGTTATGGAGAAGAAGAAAAATCTTATATTCATTCAT GTCATGTAAATAGTTTTCTTTGATTATATATACAGTGTTAGAAATACAATATAAAACAATTCATGTGTTTTCGCTAAAAG CTCAAGTTTTTGGTATAGTTAGTTCATGACATAATATCAGAGCCTTTATGGTCAAATGGTCTTGGTTTAATCCTTGTTTA GCCTATTGTTCGGATAAAAATTTGAATTTCATCTCAATTTTGGTGGATCTGTGTATTGTCCACACTTCAAGCCCAATTGT TTCTTGTATGAAGGGGCATGTTAGTTGATTCATGACACACAAGTACCCCAACATTCTAGAGTGATGTAGAGAATTGAGAT AATCATATTAAATATGTGGAATTTAAGATCCCTATGATTGTGTGGAAATTAAAATGCTGTTCAGTTCATAACTAGGAATC TCAAGAATGTGATTTTGGGTCTCCAGATATCACACACTCCCATAACACAAGCCCAGTGGGTTCCAAAATTTGGCATTAAA AATGCAGGGTATCTTATTGGTGAGGATATGTGAGCTTACTAAATGCTTCAAATCTTCAATAATGTTTACTGCTATAAATT TGTGATAGGTACTCACATATTTATAGGTACTTTTGGTTAGTATTGTCTTAGTTAGTTGGGAGGGTTAGTTAGTTAGAGGA TTGAAGAGCTTGGTTTCCTATAAATAAGAGGAAGTTAGAGTCAGTTGGGTATCTTTGTATTCAGTTTGGTTTTGGGTTCT AGAGAGAGTGGTCTCTTTCTGGGTGTGAAGGGTATTTGGTATCCCTTCTCTATTGTATCTTTCGGTCTTTCCTTAGTTTT CAATTTGGGGATTAGGAATTTCTATCAATAAAATCAGGTTCTACCAATCTGCATATCCTTTGATTCACAATTCATCATCA GTTACATTATTGCTTCGTGAGACTTGACGTGGAAGCCATGTCACTAGTCTATTTAGGCTCTAAATTTGAGGTCTATATAA TGTTTACTCCTATCAATCTTGTTATTATATACATAATCGTCATAGTACCATATCCTATTTGGTACAAGTGATTGCTAGAA AATTTGTTCAAACGATCTGAACCTTCACTCCTCTTGATATCCCTTCTTGTCAAGGCCTTTGTCTATATCTTAAGGAAACG TGTATACTCTATTTTATTTCATTTAGGGCTTTTATCGAATTTTAATGTACAAGCCTTCATTGTTATATCCAAGTCACTTC CGACTCTGATGCAATGTGCTTTTCTGTTGTGAAGGATTAAAATTAAAATGAATTTATCCACAATTGTCAATGTCATAGTT TCTTTGGAACTTTCAGATTTATCCTTTTAACCTGTTAGTTAATGCAATTGAGTAGTTTATTTCTACAGTGTTGAGTTTGC TATCTTAGTAAGTTCTTTACAAGGAGTCATATTAACTTAAATCTGCTGATACCATATTGGGAAGCTAATCCCAACTTTTT TGAAATAATTTTCAGGTTGTTGGTTCAGAAAGCATTGAAGGAGAGGATCAGGGAACTCAAATCACTAAATTTCTAGAAGG ATATAGAGAAGGAAGAACTGTACAGAAAAGACTTAGTGGGCCTTCACTGATGCAATTTATCCATCGATCTTTTGACATTA GAATGGTGTACATGATTGTATTTATGGTCGCAGTATTCATACTTATTCAGACCCTTGGCGGTAAAGGAGGTGATGAACAC CATAGAGTACCAAATCAAGAACAGGTAGATCATGCAAGCAGCTCTGTTTCAGAAGTTGAAAGCAAAGAAGAGTATAAACC AGGAGACAAAAAGGAAGATTAA
CDS sequence (LotjaGi5g1v0280900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGGGTTTTGTTGGCTTCTTGTGTTGCGTTGTTGATCCACTTTTGCAGTGCTTCTGAACCACTCTCGGTGGATGGCAC GGTGTTGGTACTCGACGAATCCAACTTCGATTCCGCTATCTCCTCCTTCGATCACATCTTGGTTGACTTTTACGCTCCCT GGTGTGGCCACTGCAAGCGTCTCTCTCCCGAGTTAGATGCAGCTGCCCCTGTACTTGCAGCCTTGAAGGATCCCATAGTC ATAGCAAAAGTAGATGCAGACAAGCATACCCGCCTTGCTAAAAAACATGATGTCGATGCGTATCCAACCATTCTTCTGTT TAATCACGGTGTACCCACAGAATACCGTGGACCAAGGAAAGCAGATGTACTTGTTCGTTATCTAAAGAAATTTGCTGCTT CTGATGTTTCCGTTCTTGATTCAGATTCTGCTGTGAACAATTTTGTTGAAGAAGCTGGCACTTTTTTCCCATTATATATA GGTTTTGGGCTGAATGAGTCGGTAATAGAAAAGTTAGCCATAAAGTATAAGAAAAATGCATGGTTTTCTGTGGCTAAGGA TTTCTCAGAGGATCTTATGGTATTGTATGACTTTGATAAGATTCCTGCATTGGTTTCTCTTAATCCACAGTTCAATGAGC GGAGCACATTCTATGGCCCCTATGAAGCAGAGAACTTTTTGGAAGATTTTGTAAAACAAAACCTGATTCCTTTGGTCGTG CCAGTTTCCTATGACACACTTAAGTTGATGAAAGCTGATGGTAGGAAAATAGTTTTGACAATTGTGGAGGATGAAAATGA AGAAAATTCAAAGGAACTGATTAAGTTATTGAAGGGTGCTGCATCTGCAAATCGTGACTTAATATTTGGTTATGTTGGAG TTAAACAGATGGACGAATTCGCTGACAAATTTGATACCAGTACTAAACTACCAAAGATGGTCATTTGGGATAAAAGTGAT GACTACCTTTCTGTTGTTGGTTCAGAAAGCATTGAAGGAGAGGATCAGGGAACTCAAATCACTAAATTTCTAGAAGGATA TAGAGAAGGAAGAACTGTACAGAAAAGACTTAGTGGGCCTTCACTGATGCAATTTATCCATCGATCTTTTGACATTAGAA TGGTGTACATGATTGTATTTATGGTCGCAGTATTCATACTTATTCAGACCCTTGGCGGTAAAGGAGGTGATGAACACCAT AGAGTACCAAATCAAGAACAGGTAGATCATGCAAGCAGCTCTGTTTCAGAAGTTGAAAGCAAAGAAGAGTATAAACCAGG AGACAAAAAGGAAGATTAA
Protein sequence (LotjaGi5g1v0280900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRVLLASCVALLIHFCSASEPLSVDGTVLVLDESNFDSAISSFDHILVDFYAPWCGHCKRLSPELDAAAPVLAALKDPIV IAKVDADKHTRLAKKHDVDAYPTILLFNHGVPTEYRGPRKADVLVRYLKKFAASDVSVLDSDSAVNNFVEEAGTFFPLYI GFGLNESVIEKLAIKYKKNAWFSVAKDFSEDLMVLYDFDKIPALVSLNPQFNERSTFYGPYEAENFLEDFVKQNLIPLVV PVSYDTLKLMKADGRKIVLTIVEDENEENSKELIKLLKGAASANRDLIFGYVGVKQMDEFADKFDTSTKLPKMVIWDKSD DYLSVVGSESIEGEDQGTQITKFLEGYREGRTVQKRLSGPSLMQFIHRSFDIRMVYMIVFMVAVFILIQTLGGKGGDEHH RVPNQEQVDHASSSVSEVESKEEYKPGDKKED
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 18 | 18 | - | – | |
| Phobius | 1 | 2 | 2 | - | – | |
| Phobius | 1 | 18 | 18 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 18 | 18 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 26 | 26 | - | – | |
| Phobius | 3 | 13 | 11 | - | – | |
| PANTHER | 7 | 430 | 424 | 1.6E-201 | – | |
| PANTHER | 7 | 430 | 424 | 1.6E-201 | – | |
| ProSiteProfiles | 9 | 133 | 125 | 14.256 | ||
| Phobius | 14 | 18 | 5 | - | – | |
| Gene3D | 18 | 140 | 123 | 2.5E-34 | ||
| Phobius | 19 | 373 | 355 | - | – | |
| SUPERFAMILY | 21 | 131 | 111 | 4.05E-32 | ||
| Pfam | 28 | 130 | 103 | 3.3E-27 | ||
| CDD | 29 | 128 | 100 | 5.28346E-34 | – | |
| PRINTS | 46 | 54 | 9 | 7.0E-7 | – | |
| ProSitePatterns | 47 | 65 | 19 | - | ||
| PRINTS | 54 | 63 | 10 | 7.0E-7 | – | |
| PRINTS | 97 | 108 | 12 | 7.0E-7 | – | |
| Pfam | 173 | 328 | 156 | 4.7E-10 | – | |
| Gene3D | 225 | 361 | 137 | 1.5E-11 | ||
| SUPERFAMILY | 234 | 360 | 127 | 5.67E-6 | ||
| TMHMM | 372 | 391 | 20 | - | – | |
| Phobius | 374 | 392 | 19 | - | – | |
| Phobius | 393 | 432 | 40 | - | – | |
| MobiDBLite | 396 | 432 | 37 | - | – | |
| MobiDBLite | 415 | 432 | 18 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cell redox homeostasis | Any process that maintains the redox environment of a cell or compartment within a cell. |
Expression pattern of LotjaGi5g1v0280900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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