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Field | Value |
---|---|
Gene ID | LotjaGi6g1v0061200 |
Transcript ID | LotjaGi6g1v0061200.1 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | XH/XS domain protein; TAIR: AT3G48670.1 XH/XS domain-containing protein; Swiss-Prot: sp|Q8VZ79|IDN2_ARATH Protein INVOLVED IN DE NOVO 2; TrEMBL-Plants: tr|I1LMF4|I1LMF4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0061200 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:11130121..11138984) extracted from Lotus japonicus Gifu genome v1.2.
CTGTTCTTTTCGTACTCTTCACACGATAGCAAACGACAACTTCAATTGTCGGGTAACCACGCATTTTCCTGCTGACACGT ACGCGCACTACGTGTCCTGCGTCACACACACCAATCACAAACCTCCACGTCATCACCTCCTCCACAATCGCCACGCGCCC CTTTTGTAACACTGATTGAAGAGCACGAAACCCTAGTCACCAGTGTGCAGAAGTAACAGTAGCTGCAAGATTCGAGGGTC AAATCTCCATAACCAGAAAAAATTCAGAATCTCTGATCTTGCGATTCCTCTCATGTAGAGTGTCAATCTCACACTCACTA CCTTCCTCCAGATCCAGCTTGAGGGTTCTTCCTATTTTTGCCCGTAGGTCTAAAATTCATCTCTGCATTTTCATCATGCA TGTGCTTTCTGTCTACTCTGTATACCCAATTATAGTAACTGCTCATTTTTGCTTCTTCTTCTACTGTTAATTGGAGTTGT TTTTGGGTTACTGGTGTTTTGGGAAGGAATTTGAGTGGGTTTGATTGACATGCATGAGCAATTGATGTTTTTTTGGGTGA ATTTTTAGTGGAAATTTGTGTTTCCCCAGTAGCTCTCTGTGAGATAATGAACCTGCATTTGGGGTTTGATTATTGCTTGA CAAGTGAGAATTTTTTGAATTTTTACTAGTAAGCTTCTCTTTGTGATATTTTGATATGAATTTTTAACCTGCATTGGGGG TTTGATTAATGCTTAACAAGTGGGACATTAGGTTGGAGTTTGAAAGTGTTAACTTTATCAGCTTTTTTGAATTTTTACTA GGAGTAATGGGTTATTTGTTGATCTCTGGCTGTGAAAATGGGGTTGGCTGTGTGGTCCAACGTTTTAATGCTGCGTAAAA TGTGTGTCTATGGAAATATGGTAGGTTTTCAATTTAGGGAAAGGATTGATTTTGAGAGAAGCTTGGAAAGGTTTTCAAAT CTGGTAGGTTTTCGTTCTTAGACTTTTTGCATTTATAATTACATTTTTATCATTTAACTCTTGATGGGTTCCAGACCGTT TGTTTCCATGCTTAATCTCTTGTGTAGTATTCAGTTGAAGTTTCACTTTTGAAGCAGCGTTCTAATTTCTAATGTTTGAA GTAACGATGGATCATTTTCGATGAAGTAAATGTAATGAAAACTTCTGAGTGTTTCTAATGAAATTTCTGTTCAAGAATAG TGTTTTTCCAAGGATCTGAATATGTTATTTAACGAGAACAACAGAGTATTAATATTTAACTTGTCTTTCAGGTTTTGTAA TAAAAAGCCTACGAGCAACTGTAATGGCTCACAGCTCTGACGAGGATTCTGATATAAGTGAATCAGAAATAAGCGAGTAC GAAGATAAATATTATGAAGAACTGAAAAATGGAAGTCAGAATGTGAAAACCTCAGATGAGACCTTCACTTGTCCATACTG CCCTAAAAAAAGGAAACGGGATTATTTATACAATGAACTCCTTCAACATGCTTCTGGGGTGGGTCAGAGTGGTTCACAAA AGAGAAAGGCAAAAGAAAAGGCTAATCATTTGGCCTTAGTGAAATATTTGGAAAAGGATCTAAAGAATGGAACGAATGGT GATGTTCCATCAAAACCCGCTGATAAAAATGATTCTCAGGTTAATTCTGATGAGCAGTTTGTGTGGCCCTGGATTGGGAT TGTAGTTAATATTCCCACTAGACGGACAGAAGACGGGCGCACTGTTGGGGCGAGTGGTTCCAAGCTGAGGGATGAGTACA AAAGCAGGGGTTTCAATCCTGTTCGAGTCAATCCTTTGTGGAATTTCCGAGGTCACACTGGAACTGCTCTTGTGGAATTC AAAAAAGACTGGCCAGGCTTAGATAATGCGTTAGCCTTTGAAAGAGCATATGAATTAGAACATCATGGGAAAAAGGATTG GTTTGCTAATTCTGAACCGAAGGCTGGTCTATATGCCTGGGTTGCCCGAGCAGATGACTACAACAAAATGAACGTCATTG GGGAACATCTGCGGAAGATGGCTGATGTCAAAACCATACCTGAACTCATTGAAGAAGAAGCTCGAAGGCAGAATAGTCTA GTGTCCAATTTGACTAACATTATACAGGTGAAAAACAAGCACTTAAAAGAGATGGAACTAAGATGCTCTGAGACTACGGT CAAAATGGAGATTGCCATATCAGAAAAAGATAAGCTCATTCAAGATTATAATGAAGGTAATCTATTTTTATCGAGCCTAA GTTACTTCTCCCTAACTTGGATCAGGACTTGTTTAGTTTTTGAGCTTCTGATTTATATGTCTAGTACTAGAAACCCAAGT ATATGGTGCAGCTGGTATTTTGGTTACAGATCAGATTCTAGAGTGGCAGTTTCTTGCCCACTGGGTTGAATCTGATTTTG ACAGTTGGGAGAGGAGAGTGGGAGGGTGGTCCAGTCATCACCGCTCACTGCTTGAATAATTACAGTGGTTGCACCATAGA ATTAGACATCGATAAATTGATTTCTTAAGAATGCTATGCCGGAATTCCATTTTACATTTTTCATAATTTGATTTTATTTT TAAATGCTCTGATCTGCTCTAACAACTTTGTTTTATGCAATGATTCCTTGTATTTAGAGATAAAGAAAATACAGTCAAGT GCTAGGGATCACTTCCAAAGAATTTTTAACGATCATGAGAAGCTTAAATTGCAACTGGAATCTCAGAAAAGCGTGCTTGA GTTGCGAAAAATTGAATTGGAAAAGCGCGAGGCACATAATGAAAGTGAAAGAAAAAAGCTGGCAGAAGATATTGAGGAGG TATAGTGTTTTTCTTATTTTGCTCCATCTCATCTAGCATACTATGATTGGGAATCCTGTGAATTTAATGTTGAAGAATTT AAATTATTATTTGAAGTTGATTGATTATTATGGAGATGGTTGATACTTGATACTCTTGGATGTTTTATTGCTTTCAAGGA AGGCCTTAGCAACAAAGGTTTATCATTTTTCCACTTATGGGTTTTGAATTTTGATTGTCATGAAATGATATGTTGAAAAT TATTTTTCTGTTGAATTTATGGATAATTAATTCTGAACATACTGGAAATATGATGAAAATGGTTTCCTTTTCAGTTGTAT GCTGTTGAAGGCTATGAATCCAAACCAAGTTAATGGCTGGATTGCTGGTGCATTTTCTTTAAAAGGGAAACTATTAATGA TTAAATCCTTGTTAGCACCTTATAATCTGTGTGCTTGGATTTGTATCTCTGCGATTTTGATCATATCCCTCGTTTTGTCA CAGGAACGTAGAATGGATTGAATCAATATTTAACAGTAACTGTTGAATATAATTAAAATTATGAACTCTATTGAGGGATT ATAAGGCATGCTTTTAATGAGATGAAATTTGGGGAAGGGGGAGAGCAGGGGCGGAGGGAAGGTGCGACCTCCCTATGCCA TGGCCATCCCCCCTATCTTTTAACTTATTAATACTTATACAGTTATACTATATATATATATATAATTGGCCCCTGTATCC CAGTTGTTTTCCCATGACAGTACTCATCCCTCCCCATTTCTTTTTTTTTTTTTTTAACTAAAACTCACACACTTCTTCTT AATAAATGAGATCATTGTAATTTTTTTTATTCACTGAAAGTTTGGCTTATATGGGTCGCACAAGCACATAGTGGAAAGTG AGTCTCATTTTCTTTGTAAAAGCAACCAAAGAAGTTCCATTCAACTGAATAAGTGAATAATTCATGACGCTTCCTAATGC TACTGCTGCTTCATCTTGCTCCCGCTGATTAATAATTGAAGTGTTGCTCCTAATTTTTGGGTCATGAAGAGATTTCTTCT TGATTATGTGTTTCGATGTGCTACTTTTCTACTACTTTCGGAGAGAGTGCGCTGTTGTTTCTTTCTAGTTTATTCTAGTT TTTGTTGCTGGTCATTTAATGCTTATCTGATGGTTAGTATCTCTTATACTCAATCTAATCATGTATTTCTTTTGCTTATA AAATAGTAGTTATATATCAATCTTGTCGCATATGTTATATATGTGAAAATTTTAAATTTTCTTATAAATCATATAGTTTT AGATCTTGGTCACCCATGTCTCAAAATCCCGCCTCCGCCAATCTAGAGTCGTATGCTAGGGAATTTCAAACCAGGGGTTT TCTGTTTTTCCTTTACTCTTCTTACTCCCATTAAGATTATTTTTGGATTGCTAGAATGTAATGATACTACTAGGTTCTAT TTTATGGATTGTTTAAAGCAGGATGAAATGATTTTATTCTGTTTGATCCAACACTCTTCTATTTTTGCCTTCAACTGAGG AGCATGGGATGAAAAAATGTCTGAGATTTGAGATTTTTTATCTTAAAGCGGAAGTCATGGCTTGCCTCGAAACCAGCTCA TGATACCATGTTAGAATTAACTTACATTCACACATCACTACAAAACCCTAAGCTTAAGGCAATGGATGTGTGTGTTCTTT TACTTGTATACACTTCTACACTTGCTAATCTAGACAATGTGGGAATTCTCTGAGTCACACTTGTTACTACTCTAATAGTT TTAAATAATAATGTTCAAGCAATGGAATGACATGTTTATTTCATTCCTCTCCATTTCTTTTCATCTTATTCCATTCCATT TCACTTTCTAATAGATATCCAAGCAGCTTAAAAAGCATGCTTAAGGATCCTTTGAACTAAAATTTTGACATAATGTTTTT GCTGTGCCTTTGAAATCATTAAGATGATAATGTGCTTAAAAAGCTTTAGCAGGCCTTGTTTAACTCTGCTGCATTTATTG TCTTTGCAGAACGCAGTGAAGAATAACTCTCTTCAGATGGCTTCTCTGGAGCAACAGAAAGCGGATGAAAATGTTATGAA ACTGGCTGAAGATCAAAAGGTTTGTGTTACTTGTCATTAAGCTTTGTCAATGATCAAAACTGTACACCTGAACATCAGAG TAGGTTAATGTTATTTGAATATATTTTGAATTTTTGATACAGAGAGAAAAAGAAAAACTCCATGCTAAAATCATTCAACT TCAAAAAGAACTGGATATGAAACAAAAGCTGGAATTGGAGATTCAACAGCTAAAAGGATCATTAAGTGTTCTGAAGCACA TAGAAGATGATGAAGATGCAGAAGTTCTGAACAAGGTTGATGCTTTACACAAGGATTTGAGAGAAAAGGAGCAGTCACTT CAAGACATAGATGAATTGAACCAAACACTAATCGTCAAAGAGCGGAGGAGTAATACCGAGCTGCAAGAAGCTCGAAAGGA ATTGATTGATGTAAGTGTGCTTTTTCAGATATTTTTCCCTTTCCAGTTTACTGATTCTTTAAATTAAATTGGAAGAGCAC CTGTTCAACAATGTCAAGTTTTATAGTTCTTTCATATTTGAATTATTAGTTGGTAATGTTTTGTATGCTGATTTTACTTG CTTATTTGAAGTGTTATGCGTTGAAGTACACGTGGTATAAATTCACATTTACTTATAGAGCACTCCTCTTACCTCTTCTT TTTTTCTTTCTGGTCTACTCTATCTTGATATCTATTATTGTTCAGAGCAAGGCAGCAAAGTGACTAGAGTACAATTAAAA TCTCGTTGTATCCATTTCATGTAATTGATTTTTATTACTCGAAGTGTTATTAATGGTCGATCTGATTATGCAGACGAGAC CTAGCTGTGATTTTGTGGATATCCATTCACTGCTTATATGTTACATTGATTTTAATCGTTGGGCTTTTCTCTCTTGCAGT ACATTAAAGAGACGTCATCTCGAGGCCACATTAAGGTGAAGAGAATGGGGGAACTGGACACTGGACCGTTCCTTGAAGCC ATGAAGAAAAGATATAATGAGGAGGAAGCTGAAGAGAGAGCTTCAGAACTGTGTTCATTGTGGGCAGAATATCTGAAGGA CCCAGATTGGCATCCATTCAGAGTTGTCATAATTGAAGGGAAAGAAAAGGTATGTCTTTGTTAAACATATAAGTCCCCTT GAAATTGTCCAGAACTATACCTGTTTCATTGCAATGCATATCACTCTGAATCAAATTTGGTTCAGCTATTATTTATTTTC ATTACCTCCTCATTAAGAAATGAATATTTTGATGGTCACTGTACTTTAGATTATAGCTATTAGGCCTTCTTAAGCTGTAG TCCCCTCTCACCTAGTGTAAGCTAGGGGCATTCTTTATATTGATCGTTTCGCTTTAGTATATGACATATATTGAAGTTGA GGAAGGTTTAAAGTATTAGAAACGCCATGAGGGATTAATAGGAAAAAGAATAACCAGACAACCATGAAGAGGGGCCATTA TTTTGAAATTTGGAGTCTGAGCCTCCTTATTAGCAGCTGTTGCATTTTTTTGTGAGTTTGTATACCTGGAAGGTTTAAAC AGCATGCTTTGCAAAACTCAAATGCAAAAATGATGATTCAATTGACATTATGGGGGGTAAGTAGTTTTACGTGTATCCTC CTTATAGATCCTGGTTATGAGGGTGTGTTGTACAAGGAAGGGGATAGGCAGTAAAGGATCAGCACATAGTGGACAAGGAA GGATACTATATAAAAAAGGGGATGATTCATGATGTTTAGAACATAAGTGAATACCAAGCTGATAAGCAGTTGTGGGAGAA GGATGGAATTTGTCTGTGGGAAATGAAAATATAAGAGGGAAGGAACGGAAGTGTGGGATCTGGAAGATTGAGTGCGGGAT ATTAGGTGGGAGGAATCAGATCCATGATCCATCAATGAACCTGTTCATTTTCACTGATGTTGTATTCTTCTGTTTGTCTT CCAGCATCAGCGAGAGTAAAAATGAGAGATACACTGTAATCCCTCCTTAGATACTCTTATTAGATTACTCTCTATTTAGA AGAGGGAATTATTGTTTGTGAAAGCAGTAATATCTAATATTAATAATCACACCTGATTCCAGGTCCTAACATATTCAGGG ATACCTGATGCTCTGCCTTATTGTTCCTTTATTAAATTATCATGGGACCTTGTGTGATTGATTATATTTAGGGAAGTTGA TTTGGGGATCTTTGAAATGTTCTTGCTTTGCCTTGGTTCATTGATGATTATTTAACCGAGCTCCATTAACTTTCATTCTT CCCCATTGCTTATGGACATTTATGTACAAAATAGCAATTTTATCTATATAAAAGGGTTTCGGATCCATTTTAATCTACAA TTATCCTGCAATATTTCGTCTAATTTCTTTGTTGAAACTTTTAAAGCATGCAATTTTTTATCTGGTATCACATTTTTTTA ATTTCAGGAGATAATTAAAGATGACGATGAAAAGTTGAATGGCCTAAAAAATGAAATCGGTGAAGGGGCGTATAAAGCAG TGATGACTGCTTTAACAGAGATAAATGATTACAATCCCAGTGGGCGATACATAACCTCAGAATTGTGGAACTATAAAGAG GGAAGGAGAGCAACTCTGAAAGAAGGAGCGCAAGTTCTGTTGAAGCATTGGGAAGTGGTTAAAAGCAAGAGGGGAATGAT GTGAAGGTTTGTATTAACTAGTTACTATATAATGTATTTAGGCGACTATATTTTTCTCATGAAACTGTATAGCGAGAACT TAAAGGAGGTTTTTTAAAAGGCTATATTACTGCTTTTGATGTTTTCTTAAGAAACTACCAGTTGATTTATAGTAATCAGA ATGCCCTCCTTCCTTTTCTTATTAAGATCATCTCATGTCATATAACATTGTCATATGAAACATTCTCTTTGTAAATATTC AGAAGGTTCCGCCTATTTAATACTTATGAAAAAGGAGACAGACACAATTTCAACATGATAATGTGATGTGAAATTTACAT GACAGACATGATCATGATCCCGCTTTTCACATGATTACTGATACAGTTTTAGTTACATGTCATGTAACTCTTGATTTTAT TGCTGAGAGGTTGATTGATGTTTGTGACAGGAACAAACATGCTGCATTTGGATAGCTAATTTATGCGCAGCTGGGTTTTA AGCATCCAGATTTGTAGTGCTGCCAACCTAACGGTTGTGTGTGACAATGATAAACTGTTAGTTTTCACTAGTCATTAGGG TTCTATGGACATCTTGCTGTGAATCAAACTGCAATAATAATGACAGCCCTTGTGCTATCTCAAGTGTGGGGCAAGACATT GATGTCAAACTTGTACAACTTAATTAATCGTTTATTTTAGCATGTTTCTTTTGGTACTTGCACTTTGGTATAACTATATT TTACTGTTTCTCTGTCATGACCCAACTTATGTTTGGGATTCAGTTTCCTACTTTCCTTGAACGACCCGAAACAGGAGGAG CACTCTGCTTCCACCTTTTGGTACTTGAACCAATGCAATCTTACTAGGATTTGTTTTTGCTTAAATAAGTTTTTGATCAA ATCCATTTCTGAATTTGGTCGTAATTTTTTGTTTTCTATCCCTCCAAAATCTTGAACCAATGCAATCTTAGTTTTTCCTT CTAGAAAAATGCTAGTAACATTATTTTTGACAGTAATGTTATTAACGTTCTTTCTAACTTTCATTAATTAGTTAAAATTT ACGTGGACTGCCACGAGACCAACATCATAAACTTAGCATAGCCTGCTTAATCCCATGTAATTTTGTTAAGGACTCATGGT GAGTAGCACAAGACAAGACAACTCTCATCATAGCAGTTATGCACTCCTCAACTTTGCGTTCTAACACTTGTTACCATTGT CATAGTCGTTGGCTCTAAACCCACCACTCTTAACACTTTGTTTGGTAGAGGGAGGTTTGGATAGAGAGAGATGGAGAAGA GAGAGTTAGGGGGAGGAATGATGAAATATGTGTGTTTGGTAGGTGAGAGGAGGGAGATAGAGCC
CDS sequence (LotjaGi6g1v0061200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTCACAGCTCTGACGAGGATTCTGATATAAGTGAATCAGAAATAAGCGAGTACGAAGATAAATATTATGAAGAACT GAAAAATGGAAGTCAGAATGTGAAAACCTCAGATGAGACCTTCACTTGTCCATACTGCCCTAAAAAAAGGAAACGGGATT ATTTATACAATGAACTCCTTCAACATGCTTCTGGGGTGGGTCAGAGTGGTTCACAAAAGAGAAAGGCAAAAGAAAAGGCT AATCATTTGGCCTTAGTGAAATATTTGGAAAAGGATCTAAAGAATGGAACGAATGGTGATGTTCCATCAAAACCCGCTGA TAAAAATGATTCTCAGGTTAATTCTGATGAGCAGTTTGTGTGGCCCTGGATTGGGATTGTAGTTAATATTCCCACTAGAC GGACAGAAGACGGGCGCACTGTTGGGGCGAGTGGTTCCAAGCTGAGGGATGAGTACAAAAGCAGGGGTTTCAATCCTGTT CGAGTCAATCCTTTGTGGAATTTCCGAGGTCACACTGGAACTGCTCTTGTGGAATTCAAAAAAGACTGGCCAGGCTTAGA TAATGCGTTAGCCTTTGAAAGAGCATATGAATTAGAACATCATGGGAAAAAGGATTGGTTTGCTAATTCTGAACCGAAGG CTGGTCTATATGCCTGGGTTGCCCGAGCAGATGACTACAACAAAATGAACGTCATTGGGGAACATCTGCGGAAGATGGCT GATGTCAAAACCATACCTGAACTCATTGAAGAAGAAGCTCGAAGGCAGAATAGTCTAGTGTCCAATTTGACTAACATTAT ACAGGTGAAAAACAAGCACTTAAAAGAGATGGAACTAAGATGCTCTGAGACTACGGTCAAAATGGAGATTGCCATATCAG AAAAAGATAAGCTCATTCAAGATTATAATGAAGAGATAAAGAAAATACAGTCAAGTGCTAGGGATCACTTCCAAAGAATT TTTAACGATCATGAGAAGCTTAAATTGCAACTGGAATCTCAGAAAAGCGTGCTTGAGTTGCGAAAAATTGAATTGGAAAA GCGCGAGGCACATAATGAAAGTGAAAGAAAAAAGCTGGCAGAAGATATTGAGGAGAACGCAGTGAAGAATAACTCTCTTC AGATGGCTTCTCTGGAGCAACAGAAAGCGGATGAAAATGTTATGAAACTGGCTGAAGATCAAAAGAGAGAAAAAGAAAAA CTCCATGCTAAAATCATTCAACTTCAAAAAGAACTGGATATGAAACAAAAGCTGGAATTGGAGATTCAACAGCTAAAAGG ATCATTAAGTGTTCTGAAGCACATAGAAGATGATGAAGATGCAGAAGTTCTGAACAAGGTTGATGCTTTACACAAGGATT TGAGAGAAAAGGAGCAGTCACTTCAAGACATAGATGAATTGAACCAAACACTAATCGTCAAAGAGCGGAGGAGTAATACC GAGCTGCAAGAAGCTCGAAAGGAATTGATTGATTACATTAAAGAGACGTCATCTCGAGGCCACATTAAGGTGAAGAGAAT GGGGGAACTGGACACTGGACCGTTCCTTGAAGCCATGAAGAAAAGATATAATGAGGAGGAAGCTGAAGAGAGAGCTTCAG AACTGTGTTCATTGTGGGCAGAATATCTGAAGGACCCAGATTGGCATCCATTCAGAGTTGTCATAATTGAAGGGAAAGAA AAGGAGATAATTAAAGATGACGATGAAAAGTTGAATGGCCTAAAAAATGAAATCGGTGAAGGGGCGTATAAAGCAGTGAT GACTGCTTTAACAGAGATAAATGATTACAATCCCAGTGGGCGATACATAACCTCAGAATTGTGGAACTATAAAGAGGGAA GGAGAGCAACTCTGAAAGAAGGAGCGCAAGTTCTGTTGAAGCATTGGGAAGTGGTTAAAAGCAAGAGGGGAATGATGTGA
Protein sequence (LotjaGi6g1v0061200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAHSSDEDSDISESEISEYEDKYYEELKNGSQNVKTSDETFTCPYCPKKRKRDYLYNELLQHASGVGQSGSQKRKAKEKA NHLALVKYLEKDLKNGTNGDVPSKPADKNDSQVNSDEQFVWPWIGIVVNIPTRRTEDGRTVGASGSKLRDEYKSRGFNPV RVNPLWNFRGHTGTALVEFKKDWPGLDNALAFERAYELEHHGKKDWFANSEPKAGLYAWVARADDYNKMNVIGEHLRKMA DVKTIPELIEEEARRQNSLVSNLTNIIQVKNKHLKEMELRCSETTVKMEIAISEKDKLIQDYNEEIKKIQSSARDHFQRI FNDHEKLKLQLESQKSVLELRKIELEKREAHNESERKKLAEDIEENAVKNNSLQMASLEQQKADENVMKLAEDQKREKEK LHAKIIQLQKELDMKQKLELEIQQLKGSLSVLKHIEDDEDAEVLNKVDALHKDLREKEQSLQDIDELNQTLIVKERRSNT ELQEARKELIDYIKETSSRGHIKVKRMGELDTGPFLEAMKKRYNEEEAEERASELCSLWAEYLKDPDWHPFRVVIIEGKE KEIIKDDDEKLNGLKNEIGEGAYKAVMTALTEINDYNPSGRYITSELWNYKEGRRATLKEGAQVLLKHWEVVKSKRGMM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
MobiDBLite | 1 | 24 | 24 | - | – | |
PANTHER | 3 | 635 | 633 | 0.0 | – | |
PANTHER | 3 | 635 | 633 | 0.0 | – | |
Pfam | 43 | 86 | 44 | 6.3E-19 | ||
MobiDBLite | 94 | 113 | 20 | - | – | |
Gene3D | 111 | 282 | 172 | 2.8E-70 | ||
Pfam | 116 | 227 | 112 | 2.1E-38 | ||
CDD | 119 | 226 | 108 | 4.76775E-39 | ||
Coils | 292 | 319 | 28 | - | – | |
Coils | 328 | 360 | 33 | - | – | |
Coils | 391 | 435 | 45 | - | – | |
Coils | 447 | 495 | 49 | - | – | |
Pfam | 505 | 635 | 131 | 8.7E-55 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Biological process | Gene silencing by RNA | Any process in which RNA molecules inactivate expression of target genes. |
Expression pattern of LotjaGi6g1v0061200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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