Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0090200 |
| Transcript ID | LotjaGi6g1v0090200.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glucan 1,3-beta-glucosidase; TAIR: AT5G01930.1 Glycosyl hydrolase superfamily protein; Swiss-Prot: sp|B0XN12|EXGA_ASPFC Probable glucan 1,3-beta-glucosidase A; TrEMBL-Plants: tr|K7MPD7|K7MPD7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0090200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:19339554..19344348) extracted from Lotus japonicus Gifu genome v1.2.
ATGGGAATTGCTTTTACCAAATGGACGTGCACATTCTTATTTTGTTGTTGTCTCATCATTTCTGTAGTATATTCAGGTAA GGTAAATTTCACTAACTTCAATGCTTCACACCTTATCAGTTATTTTTTCTTTTCAGACAATGTTATGAACTCAATGTCTT ACTTGCTTTTTTGTTCAAGTGGAGGGGTTACATGGGGGTTCTAAAGTGAGAGGAGTGAACTTAGGAGGCTGGCTTGTTAT TGAAGGTTGGATTAAGCCTTCACTGTTTGATGGCATTGCCAATGGAGACATGCTTGTGAGCCACTACAATTTTGTTTCCT CAATTTTTCTTTGAAATAGTGGATCCTTTTGGGGTTTCAGTGACTTATCTGGCTGATTCAATTGTTGACTTTTAAAAATG TAGGATGGGACGGAGGTGCAGTTGAAGTCGGTGACGTTGGAGAGGTATGTATCTGCAGAGAATGGTGGAGGAATGAATGT GACAGTTGACAGGGATGCCCCATCTTCATGGGAAACCTTCAGGGTAAGATGGCAATTGTAAATCAATGTTTTTCTGATTT GATTTAATTTGAAATCAGTCCAGTTGCTGAAAACAACACTTGATATCTACTTGTAATAATTTTGTTCCAGAATTATTCTA TCCTAATTACTATATTTAACTATCTTTAAGTATTAGCTCCTCATTATTTCTTTTTTTATATACTTTCCTAAAAAACCTTT AACTAATATATAAACAACACCTAAGAGATGCTTCTTCTGATTCAAACAACTAACAAATCATTGTCATTGAAGATAAATTT TACCTTATCCAGTGAAACACTTCATTTTCTTTTCTTACTTGGTACTTGTCTATCAGCAGATAATAGTTTCAGTGCATTAG AGTAGACCAAAAGGATGAAATTCTAGTCTTACAAATTAATTTTATGAAATAATATAAGTAAAAAGTAAGTGATATGTTGT ATTACATTCTACTCTTTTATCCCGTTTTCAGTGAATTTTAGGATGATATACTAGTAAGGCACGACTCTTTGGTGATAGTT GTTTTGGAGGAAATCAGACTAGCAGCCGTTATTTTAGATTTACTTAAGAGTTGCTTTCAGGCTCTCTAGTCCTGGTCTGT TCTAATACAAGAAAACTGTATGCTAGTGGCTGTAATTCTAGACTGGCAGTTGGCTGTAATTCTTGGCCAGCTGTATTTTT TCATTAACATCTCTCATATGCTATTATATCTTGGGACTTGGGAGGGTGAGAGTTTCATGTGTAGCTGAATAAATATGGTA AGAACCAGTAGCTTATTGGAACTTCAAACGTGATGATGGAATTGTATGATTTAAGTTGCTAGTGTCATGTGAGGAAATGT CCAAGTTATAATCAGAAATTGTCCTTTTTCCTGTTGTAGTTATGGAGAGTATCTGAATCAGAATTTCAATTCCGTACCTC TGGTGGCCAATTTCTTACATGTGATGGTGGAGGGTGCACTGTCTCTGCGACAGCAAAATCAGCTTCAACATTAGAGACAT ATGAAATTGAGCGCAATGAGAAAAGCAGGATTCACATCAAGACAAAAAACGGGGCGTATCTGCAGGTATTCATCCTTCTT GTTTCTGCTACACTGGAAGCCATTTGTTTACATGTAAAATATGATGATGTTCTTCTACTGGACTCTTTTATTGTAAAACC GCATGAGATATGTTTTTATGAAGAATCCACCATTTCAGGCTTTCTGTAAAATATAAGTCATTTGTCCACCATTTTCTTTA AGATGGCATGTCCATTTATTCTACCGCATAATATCATATTGGCATTAAACTTTTAACAGATTCATATGATTGATAAGACG ACTGTTTATAGGCTACCACAGGTGGTCAGCTAACAGCAGACTATCCAGACACACCAGGATGGGATAACAATGCTGCCACC TTTGAAATGGTAATTGTAGCAAATTACTTACGTGGAGATTACCAGCTAGCAAATGGATATGGGCATGATCCCGCAAAAGA TGTTCTTAAGGTAAACCATATGTTGTAAATATTCTCTACATCACGCCTTCGCTGAACATGATATTTTTTTCACAGAATTT ATTCAGAGTGCGTGTTTGGAAAACCTCCTACAATTGTTTCTGAAGCCATAATCAATTTTGGGGAGAAGTTATGTGAGTAG CTTCTGGGTGCCAGAATTGATTATGAGGAAAGAAAGTTGATCCAAACTTGCTAATAGACTATCTTGTTGCAAATTTGTGG AGGCCAACTGTGTTTAAACATTTAGTGTTGACATTAGATTTTTTTTTCCAGTCACTGAAAGTAATTGTAGTGTTGTGCAC ATAGTTTTGTATAACATCACTTTTCCAACTTATCTATTTCGTTTATGCAACATATTTTCTAATGGAAACCATCACAAACA GAATACAAAATAACCAGATTGTGTTCCCAGTTTTATTGTTCACCTTTTTGTAACTGCAGAGACATAGAAATAGCTTTATC ACTATAGAGGATTTCAAATTTCTAAATAAACATGGAATAAATACTGTGAGGATACCAGTTGGTTGGTGGATTGCTTTTGA CCCTGATCCTCCAGATCCATTTATTGGAGGAAGTCTTGAAGCTCTAGATAATGCATTTTCATGGGCACAGTAGGTTTTAC TTTTACGTACTATCTTCAATGTTTTGAACACGATTAAAACTTCATTTTTCCTTTAGACAACATGCCTAATTATTATGTTG CAGAGAATATGATACAAAATGCATAATTGACCTTCATGCTGCTCCTGGTTCCCAAAATGGAATGGAACATAGTGCCAGCA GAGATGGATTTACGGGCTGGCCGACTTCTCCGGATTTCATTTCAGAGTCATTACATGTTATTGAATTTTTGGTTTCTAGG TATGTTTCAAGTTTGCAAATATATATGTAGAAATTGTTCTTGTTATGTAATAAACAGCTTCCATGACCATGCACCCTGGA ATATTGCTTTGGAGATAAAATATCATGCTTGTCGTAATTTCATCCTCTAAATATATTTAATTCAGCTCTTTTGCAGTAAG AAGATTATTGTTTAACACCCAAACACTTAATTTAGATTTATGAATGGTGTCCAAGTAGGATTTTCATGCAAAATTAGAAG GCATCATTCAGCTTTTGCTTCCTTTAAAATAATTCCCCCTTTTATAATTTTTTACTGTCCCATTTCTTTCTAGGGTAGTA CACTAGTACTGTTATGAATTTCATCACAAAGAAAGAATAGTCGTTATTTTTTTCTCTCCTAAAGTTGCTTCCTACTATGA AGTGGCAATGGCCTTTTCTGTTGGATGCTATGAGCCTATTTTGATACAGACTTGTTGGAGTTTAGTGGAGCTTATCTACT AAAAATGCATTAGATAAGCTCCAGTAAGTTCTCTTTGGTTTGCATCCAAATGGGTTCTAGCAGATTGGAACAGCTTGACT CTGTCTCCGTATACGAGATTTTAGTCCCTTCTCTGGCTTTATGGTAAAGCAATGTGAATCTGTGTTTTGACCCTACTGAG TACTGAGTAAACATTCTCATTTGCAGATATGCAAGACATCCTGCGTTGCTGGGAATCGAGCTTTTGAATGAACCATCTGC TCCCGCAGTTCCATTAGATACTTTAATTTCATACTATAAACAGGGCTACCAAATTGTTCGGAAACACTCGTCATCAGCTT ATGTGATAATCTGCCAGAGAATTGGCAATGCAGATCCTATGGAACTTTATCAAGCCAACATAGGATCTCACAACTTAGTT TTGGATTTACATTTCTACAATCTCTTTGACACATTTTTTGTTAATAAGAGCGCTGAGGATAACATACAGTACATATACAA AAGCAGGGAAGGTCAATTGCAGGCCTTGAACAATTCAAATGGTCCACTCGTTTTCATTGGTAAGGCAACTCCCCTTAATG TTTGTTTGTAGTGCATTGGATGCTTCACAATTTTAAACCAGTTATGATACTTTAGACACCCAAACAATACAGACACCCCC ACATACACCCTATTTTTCTATCTACATACACCACATTTTTTCTCCATCTCTTTTTATCACATCACATTATATATCACATT CATTACTTCTCTCTCTTAACTTCCTTTCTCACTCTGGGTGTGTACCCAACATTTTCCTGACATGCATGAAATAATTTGGT GAAGTCTTCTTTTTATCTTAAGGTTGATATAACTTAAAAGCTTGTGCTTATTTCAGGAGAGTGGGTGAATGAGTGGAGTG TGACAAGCGGATCACAAAAAGATTATCAGGACTTTGGAAGGGCGCAGTTAGATGTCTACAATGAAGCTTCCTTTGGATGG TGTTATTGGACTATAAAAAATGACAGGGTGCATTGGGATTTTGAATGGAACATTAGGAACAACTATCTTCAATTAGGTAA ACAATACAGATTTGGTGGAACACACACACTATTGCATATACATTTATGATATTTAAAAAAAAATGATGCCAGCTATTTAT CTTTGCAGGCAACTCACCCAGCAAACAGAACTTTATCACTTTAGGATTGTTAGGAATAGCATTCACCTGGTTTTCTCTTC TTCCCTTTTTATGAAATTTCTTAAATGGCTGAAAGCATATTTGGTGTAGCTATATATATTTTTTTAATATACTTTGTTCA CATTGTTGGAAATTATAGAATGCAATAAAGTTGGGTGTGTGCCAGTACCACTTCATATATATGTATGCACTCTCAACATG CAAAAGGCTCAATTTTCAGATCGGTATTTTATGCAAATAAGAGTGATAAGCTTGATATCCAAAGTTACATTCCAT
CDS sequence (LotjaGi6g1v0090200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAATTGCTTTTACCAAATGGACGTGCACATTCTTATTTTGTTGTTGTCTCATCATTTCTGTAGTATATTCAGTGGA GGGGTTACATGGGGGTTCTAAAGTGAGAGGAGTGAACTTAGGAGGCTGGCTTGTTATTGAAGGTTGGATTAAGCCTTCAC TGTTTGATGGCATTGCCAATGGAGACATGCTTGATGGGACGGAGGTGCAGTTGAAGTCGGTGACGTTGGAGAGGTATGTA TCTGCAGAGAATGGTGGAGGAATGAATGTGACAGTTGACAGGGATGCCCCATCTTCATGGGAAACCTTCAGGTTATGGAG AGTATCTGAATCAGAATTTCAATTCCGTACCTCTGGTGGCCAATTTCTTACATGTGATGGTGGAGGGTGCACTGTCTCTG CGACAGCAAAATCAGCTTCAACATTAGAGACATATGAAATTGAGCGCAATGAGAAAAGCAGGATTCACATCAAGACAAAA AACGGGGCGTATCTGCAGGTATTCATCCTTCTTGTTTCTGCTACACTGGAAAGACATAGAAATAGCTTTATCACTATAGA GGATTTCAAATTTCTAAATAAACATGGAATAAATACTGTGAGGATACCAGTTGGTTGGTGGATTGCTTTTGACCCTGATC CTCCAGATCCATTTATTGGAGGAAGTCTTGAAGCTCTAGATAATGCATTTTCATGGGCACAAGAATATGATACAAAATGC ATAATTGACCTTCATGCTGCTCCTGGTTCCCAAAATGGAATGGAACATAGTGCCAGCAGAGATGGATTTACGGGCTGGCC GACTTCTCCGGATTTCATTTCAGAGTCATTACATGTTATTGAATTTTTGGTTTCTAGATATGCAAGACATCCTGCGTTGC TGGGAATCGAGCTTTTGAATGAACCATCTGCTCCCGCAGTTCCATTAGATACTTTAATTTCATACTATAAACAGGGCTAC CAAATTGTTCGGAAACACTCGTCATCAGCTTATGTGATAATCTGCCAGAGAATTGGCAATGCAGATCCTATGGAACTTTA TCAAGCCAACATAGGATCTCACAACTTAGTTTTGGATTTACATTTCTACAATCTCTTTGACACATTTTTTGTTAATAAGA GCGCTGAGGATAACATACAGTACATATACAAAAGCAGGGAAGGTCAATTGCAGGCCTTGAACAATTCAAATGGTCCACTC GTTTTCATTGGAGAGTGGGTGAATGAGTGGAGTGTGACAAGCGGATCACAAAAAGATTATCAGGACTTTGGAAGGGCGCA GTTAGATGTCTACAATGAAGCTTCCTTTGGATGGTGTTATTGGACTATAAAAAATGACAGGGTGCATTGGGATTTTGAAT GGAACATTAGGAACAACTATCTTCAATTAGGCAACTCACCCAGCAAACAGAACTTTATCACTTTAGGATTGTTAGGAATA GCATTCACCTGGTTTTCTCTTCTTCCCTTTTTATGA
Protein sequence (LotjaGi6g1v0090200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGIAFTKWTCTFLFCCCLIISVVYSVEGLHGGSKVRGVNLGGWLVIEGWIKPSLFDGIANGDMLDGTEVQLKSVTLERYV SAENGGGMNVTVDRDAPSSWETFRLWRVSESEFQFRTSGGQFLTCDGGGCTVSATAKSASTLETYEIERNEKSRIHIKTK NGAYLQVFILLVSATLERHRNSFITIEDFKFLNKHGINTVRIPVGWWIAFDPDPPDPFIGGSLEALDNAFSWAQEYDTKC IIDLHAAPGSQNGMEHSASRDGFTGWPTSPDFISESLHVIEFLVSRYARHPALLGIELLNEPSAPAVPLDTLISYYKQGY QIVRKHSSSAYVIICQRIGNADPMELYQANIGSHNLVLDLHFYNLFDTFFVNKSAEDNIQYIYKSREGQLQALNNSNGPL VFIGEWVNEWSVTSGSQKDYQDFGRAQLDVYNEASFGWCYWTIKNDRVHWDFEWNIRNNYLQLGNSPSKQNFITLGLLGI AFTWFSLLPFL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 8 | 8 | - | – | |
| Phobius | 1 | 25 | 25 | - | – | |
| SignalP_EUK | 1 | 25 | 25 | - | – | |
| Phobius | 9 | 20 | 12 | - | – | |
| PANTHER | 11 | 167 | 157 | 8.1E-208 | ||
| PANTHER | 11 | 167 | 157 | 8.1E-208 | – | |
| TMHMM | 12 | 31 | 20 | - | – | |
| Phobius | 21 | 25 | 5 | - | – | |
| Phobius | 26 | 471 | 446 | - | – | |
| Gene3D | 29 | 88 | 60 | 4.9E-9 | – | |
| SUPERFAMILY | 34 | 462 | 429 | 2.8E-78 | ||
| SUPERFAMILY | 69 | 166 | 98 | 1.74E-19 | ||
| Gene3D | 105 | 169 | 65 | 6.0E-6 | – | |
| Gene3D | 170 | 471 | 302 | 8.6E-76 | – | |
| PANTHER | 174 | 472 | 299 | 8.1E-208 | – | |
| PANTHER | 174 | 472 | 299 | 8.1E-208 | ||
| Pfam | 184 | 446 | 263 | 1.3E-26 | ||
| ProSitePatterns | 294 | 303 | 10 | - | ||
| Phobius | 472 | 490 | 19 | - | – | |
| Phobius | 491 | 491 | 1 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. | ||
| Biological process | Actin filament organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments. Includes processes that control the spatial distribution of actin filaments, such as organizing filaments into meshworks, bundles, or other structures, as by cross-linking. | ||
| Molecular function | Actin filament binding | Interacting selectively and non-covalently with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits. |
Expression pattern of LotjaGi6g1v0090200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…