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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0253400 |
| Transcript ID | LotjaGi6g1v0253400.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ATP-dependent zinc metalloprotease FtsH; TAIR: AT2G18193.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q8GW96|AATP3_ARATH AAA-ATPase At2g18193; TrEMBL-Plants: tr|I1LHW4|I1LHW4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0253400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:56559284..56565461) extracted from Lotus japonicus Gifu genome v1.2.
CAAGTCTAGTGTGGAGTATCTATTCCCACATACTCATCTTTGCCATGTTGGAATTGAATATGTACTCCAATGGTAATAGA TACTCATATAAGTATGTATTTAACATTAGATACTATCATTGAAGATGCTCTAAGAGCATCTACATCCATCATACTCACTA AAATATTTACACTTCATTTTTTACAATTCCCCATAATGTCACATCATTTATACAATTTTACTAACTTTTTACTCCAACCC AACAACTCTTAAAAGTTTCTATAGTGGATCCCACTATAAACATCACATTTGTATATTTTATTATTTATCTCCATTTTAAT TAATTATATTTGCAACTTAATCTAATTATATTAATTGTAAGTGTTTGTAATAAATACAAGCTCACTTTTCAAGTCTAGTG TAGAGTATCTATTCCCACATACTCATTTTTGTCATGTTGGAATTGAATATATACTCCAATGGTAATAGATACTCATATGA GTATGTATTTAACATTAGATACTACCATTGAAGATGCTCTAAGGCTTCTGTAATTCTAGCAAAGTGTAACATTAATTATT CCCTTGTTTTCTTCATATTTCTCCATTAAAGTATTTTTTTCACCTTCACTATCACTTTGCTATAAATAACTAAATAAGGA CATGAACTTCCTTCACATCATCACTTGAAATTTCAAATAAAATCTTCTCCAGGACACCATTTCAGAGCCAAGAACGCAAT AAGCCAGCAAAATTTCTAAAAAACTAGAAGCAAACTCCTAAATTGGTCCTCAAAAGATTAGTGTCTCACTAAATTACTCT TCCAACAATTTTCTTCATTAAATGAGTCTCTTAAATATCCAAAAGGATGAATTTGATAAGTTTTTGTTCGTTAAGGGACT AATTTGATGAAAAAAACTTTAAAATAAAATGATACTATGCTTCTTTAAAGGAACATAAAGAGTCTATTAACTTTATTCTA AAACTTTTGGAATAGAAAGACTGGATCAGATAGTTTGCTACTGCTTTATACTGCTTTAGAAGCACTGAACCCCACAGCTA AATAGGTTCTCAGTTTTATTGCCTTATCCAAATTCCAAACAAAAGGCACAAGAGCACTTATATATGCTCCCCAGTTGGAA CAGGACAACCAGCTCAAGAAAAAATAAAAGGAAGTTAACATAGTCATAATCTTAGTCTCATAAGTTAATCACTAAGGCAA TATCAAACCACTATTCCTAGTTATCTTGAAATATTTATATTTTTCAAGTTTGTATAAACAGCTGAACAAGATGTAGCATG AACAATCAAACAATATTATTAGACCTCATTAAGCCTGCACAATAATGCTTTCTCCAAATTCATTACAAAAGAGTAGGTCA TTTGGAAACAAATTAAAGAAATAGAAGACAAGATACTAAATATTATGTATAAAAGCTTTCACATCAAAATTATCACATAA AACAACTGATAATTATTCAATCACTCTGGTTTATCCTAAGCTCGATCATTGTTTCAGGTAGTTTATCAATTCTATAGTGA CTGAAGTTGAATGGTGAACAACAGTAAAAGTACATTTTGTTTATTTACCTTGCTCCAAGATCTCCAAAATTGTTAGAAAT TAGAGCAATAATCTTGGTCATTATAACGTACATACGGTTTGTGGCGGCTATCCAATTAACATATCAATTAGTGCTGGTTT TAAACGGCCACTAACATTAGCGATATTAAAAACCACCGCTAAGTTGTATGTTAATTGAATGTCCATGTAAACTGTATGTA CACATAACATTTTTGAATCTATAATTTTTGATAACATGTTACACAAATCTACCTGTTGCTTTGAAACTACAGTGATGGTT GAAACAAACAAACAACAAAGGAGAATAAATATGGCTTGCAAAAAAAGCCAAGCCAGTTAATTACAAATTAAGCGCTGAAG AATACTAAAGGATCACAATGATATATTGACCTGAAATTTTGACAAAGCAAGCAAAGGAAATTTTATATGCATCACATGGT GGTGAGTGGCCTTAATTAATTAAATTAAGGTCAACACCACCATCTCCATGATATAAAAGGCTGCAAGATAACCCCTATTA TCATACAGATTCATTTTTCTAGCTAGATATAAATATGATTAATAATCTCTATATTCCTCTTCTAAATTGCTCCAAGCATG ATATTCCACATAAACAAATTGGTAAGCTCATAGTGGCTACTTGATGTTCTAAGGTTTTAAAGCTAAATGATATTTTGAAT GGTGCTGATGCCATGAAATTGATGAAAATGGAACCTGAGTTTCAAATGCAATGCGTAAAAGCACAACTGTAGTGGTTGTT GAAGAATGTTGAGGGTGATGTGGAGGAGAGAGGGAGGGGAGAAATGTTGAGGAACCTCAACAATGTTGAGAGACCTGCCG GACGCCACGTGGCGCGCTCCGGTTGGGCACCGACAGGCGCATGGCCTGCACGCGGGGACAAGGCACGTAACGCACCTGGG ATAAGGAGAGAGAATTTGACGGATTTCCTTGGACTGCCACGTGTTAGGATCTGATTGGGTCGCCGGATTTCTTTTACCCT TATCTTTTGAACTCAATTATTTCATCAATAAAAATATTTTATGAAAAAAAAAATTTATACCAAAATTCATGATTTTTTTT CTCTATAAATAGAGACTTGGTTCGTTTGATTTGGACACAGAAAAAAAATTAAATTGTTAAGTGTTTATTACTTTAATTTA ATTTAAAATAATAATTGTAATTTTATGTAAATAATAAAAAAAATTAAATAAAAATATGAAATAAAAAAGTGGTGGGGTAT GGTGTTGAATGAAAACCATTGGAGTGAGTAATTGTTGAGAGTTTGTTGAATTGGAGAGAGAAGATGATGTGGAGTATTGG GAAGAGAAAAAGTGGTGTTGAGAGGAGGTAAACTAAACAAACCATTGTAGATGGTCTCAACTTTGTTGAACACTCTCAAC ATCTCACTCCTTCACCTCATCCTCAACAAACCCTCAACAATCACTACAAACCATCAACAACTCTCAACATCTCTCTCAAA TCACCATTGCAAATGATCTAATAAAGCATGTGAGAGGTGGGGTCTTTTGTTTTTTTTAGTCCCTTTTGTAATAAAATGAT AAGCCTCAAAGATGCCATAGCAAAGAAGAGAAACAGAAAAACACCAAGGTTGGAGTCTCATCTTCTGGTCCCAATACAAA ATTTGAGAGAAAGGAGTTCTGTAGTCTTCTTTCTTGTTTGGAGTGAAGCAAGGAGAATCTGCCTACAACAACAGCAAAAA GGGGGAAGAAGGCTTCATCAACAAAAACCAGAACTCAAAGAAGCAAAGGAAAATATTCTGATTTCAAGTTTCATTCGGTA TACCTTTCTTGTTCATTTCAAATGTTTGTGTTGACTGTTGAGTAATGTGTTGATTTAATATTTGGTGGAGTATAATTGTT ATTAGTGGAGAGTTATATGTGGTTAATGTTAGTGGAAACACTTAGTGCTTAGTAGAGTGATTAAGTAGGCTCTAGTGTAT TAGTGGTGACTCTTTGATAGTAGTAACAACCACTCTTCATGCTATAAGTATGTGATGCAGAATACAACAAGGAAAATACA AAATGATTCAGCCCTTAAACACTTATTTTACTCTAATTTTCTACTAAGTTATGTAGTAGATATAGCTTATCATATGCTAC ATTTCTGTGTGTAAGTCTATATTTCCACCTCTAGCATACCACCAACATTTTGGACTGTTTTAACATGTGTAGGTGAATTG AACTTCAGGAATAGAAACCATGAGATCAACTCTCTCTTCTTCGTTTTCAAACTTCCGATTTGCATCTGCATCATCATGGT TTGAGTTATATGCTTCCTTCACAACATTCATGATGCTTCAAAAACAGCCATCAACCAATTCATTCCCGAACACATTCAGT CCTTAATAGTCTCAAAGCTACATGGCTTCTTCTTCAAACCTCAACTGAATCACCAGGTGGCATCTCTCAAAATTGACCAA CATTGGGAAGACAGAGGCTTCAATGAGCTCTACTATGCTGCTCAGAAGTACCTTCCCTCCCGGATAACTGGAACCTACAC ATCGCTTAGGATTGCTAAATTAGACGGGAAGAACAGCAACAACCTTGAGTTCATGATGGACGAAAGCCAACGGGTGGTGG ACGAATTTGAAGGCACTGAATTCACTTGGAGTTTATCTGTTGAATCTTCTGAAAGTGTTTCTCCTGCCGGGACTAAACAG AAGAAGCAAGCATTGATATTAACATTCAATGAGAAGTACAGAAAGAAAGCAGTGGATAGGTACATACCCCATGTGCTTAA AACCTATGAGGCCATGACAACTGAGGAGAGGAATGTTAAGATCCATTCCTGGCATCCTAACTATGCTTCATGGAAAGCAA GTGAGCAAGCTCATCCGGCCACGTTTGACACGCTTGCCTTGAACCCTGAATTGAAGCAGGCCATTGTTGATGATTTAGAA CTTTTCTTGAAGAGGAAGGAATTTTACAAAAAAGTCGGTAAGCCGTGGAAACGCGGCTACCTCTTGTATGGCCCTCCTGG CACTGGAAAATCTAGTCTCATTGCAGCTCTGGCCAATTACTTGAAATTTGATGTGTATGATTTGCACCTTACCTCTGTTT TCTCTGACCAGTGTCTTGAGAGAATGGTGAGTAGCACACCAAAGCGTTCCATTATAGTGATTGAAGACATAGACTGCAAC AAAGAGGTTCATGCTCGATCACGGGATAGTAATGACCATGGAGATAGGAAGGACAAGGTGCTAGTTCTTTTTTTTTTTGC AATTACAATGTTGATCAGAATAAGTTGAATTTAATTTAATCATCAATTTATAATCATTTATGTAACTTAAGTTATTTTTT TCCAAAATTACAGCATCACAGGTTTAGCTTGTCTGGTTTGCTTAACTATATGGATGGGTTGTGGTCTGGAAGTGGTGATG AGAAAATTATAATATTTACAACAAACCACAAGGACAGAATTGATCCAGCGCTGCTACGACCTGGTCGAATGGACATGCAC ATTAATCTTTCCTTCCTTAAAGCCAAGGCATTCAGAATCTTAGTGTCCAATTATCTTGACATTCAAGACCATGATCATCA TCCACTGTTTGATCAAATTGAAGAGCTATTGGAGAAAATAGAAGTTACACCTGCAGTAGTGGCAGAGCAACTAATAAGAC ATGAAGATCCTAATATTGCTTTAGATGAATTGCTCAAATTTCTCCAAGAGATGGAAATGCAGATGGAAGCAGAAAAGCCT GCAATTAACAATACTTAAAGCAAGTGGTGCTTGCTATTATGTTTTACTGTTTTGTTTTCTTCATTTATTTTGCAGTTAAC AAAATCTTTGTTGTGCAGCAGAATGAGATTGCTATCAACTGTTTATTAACTATATGGATTTAGTCTTATCTAGTGTCTGA CAAATTTCTATTACATTTCATTGCAGACCCTTGCTGTCTGCTGGCTTTATTCTTGGTTGGACCTTGGAGTTGGAGATCAA AGTTGGAGGCTCTCAAGTGAGAAAGGAAGATATCAACTACAAGATTTTACTGTCTCTGCTGGTTTTTAGGTACTGTTGTA GTTGCAGGATTAGTTTCAAGCTGTTAGGGTCCTGAACTCCCATCCAAGTGTCTGGTTTTTGCTTATAACTGTCTTATCTT TAGGTTATGTCCTTTAGGCTGGTTTTGTGCTTTTGATGTAGAGTGTGTTTGGATTTCAGTTGAGATCAACTGGAAAACAC TTTCAATCCAACGGAACCTAGGAGTTACTTTCACATTCGCACATTGGAATTCGTGTTTTTCAGTTGAAACTGTCTCGAAA CGTGTGTGAACTGAAAACCAAACACACACGTAATCAGTTTGCATCTTGGTTTTTATTTTCCTTGACATGGGTTGATCTTA TGAGCAAGGTTGGATCTTATGCTAAAAGCTTTCACATTATGGCCCAGTTTGGAAGAGCTTATTTGAGCTTATCTGACAGC ATAAGCTCTTATGCCAGTGTTTGGGAGAGCTTATGCAAACAGCTTATGGTCTGCCATAAGCTATTTTCAGCTTATTTTCA TAAGCTACTCAGGATAGCTTATGAAAAACAGCTTATGCTTATACACAGCTTATTTTTAATTTATTTCAATAAATTTTTAA AAATAGCTTATGAATAAG
CDS sequence (LotjaGi6g1v0253400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGGACGAAAGCCAACGGGTGGTGGACGAATTTGAAGGCACTGAATTCACTTGGAGTTTATCTGTTGAATCTTCTGA AAGTGTTTCTCCTGCCGGGACTAAACAGAAGAAGCAAGCATTGATATTAACATTCAATGAGAAGTACAGAAAGAAAGCAG TGGATAGGTACATACCCCATGTGCTTAAAACCTATGAGGCCATGACAACTGAGGAGAGGAATGTTAAGATCCATTCCTGG CATCCTAACTATGCTTCATGGAAAGCAAGTGAGCAAGCTCATCCGGCCACGTTTGACACGCTTGCCTTGAACCCTGAATT GAAGCAGGCCATTGTTGATGATTTAGAACTTTTCTTGAAGAGGAAGGAATTTTACAAAAAAGTCGGTAAGCCGTGGAAAC GCGGCTACCTCTTGTATGGCCCTCCTGGCACTGGAAAATCTAGTCTCATTGCAGCTCTGGCCAATTACTTGAAATTTGAT GTGTATGATTTGCACCTTACCTCTGTTTTCTCTGACCAGTGTCTTGAGAGAATGGTGAGTAGCACACCAAAGCGTTCCAT TATAGTGATTGAAGACATAGACTGCAACAAAGAGGTTCATGCTCGATCACGGGATAGTAATGACCATGGAGATAGGAAGG ACAAGCATCACAGGTTTAGCTTGTCTGGTTTGCTTAACTATATGGATGGGTTGTGGTCTGGAAGTGGTGATGAGAAAATT ATAATATTTACAACAAACCACAAGGACAGAATTGATCCAGCGCTGCTACGACCTGGTCGAATGGACATGCACATTAATCT TTCCTTCCTTAAAGCCAAGGCATTCAGAATCTTAGTGTCCAATTATCTTGACATTCAAGACCATGATCATCATCCACTGT TTGATCAAATTGAAGAGCTATTGGAGAAAATAGAAGTTACACCTGCAGTAGTGGCAGAGCAACTAATAAGACATGAAGAT CCTAATATTGCTTTAGATGAATTGCTCAAATTTCTCCAAGAGATGGAAATGCAGATGGAAGCAGAAAAGCCTGCAATTAA CAATACTTAA
Protein sequence (LotjaGi6g1v0253400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMDESQRVVDEFEGTEFTWSLSVESSESVSPAGTKQKKQALILTFNEKYRKKAVDRYIPHVLKTYEAMTTEERNVKIHSW HPNYASWKASEQAHPATFDTLALNPELKQAIVDDLELFLKRKEFYKKVGKPWKRGYLLYGPPGTGKSSLIAALANYLKFD VYDLHLTSVFSDQCLERMVSSTPKRSIIVIEDIDCNKEVHARSRDSNDHGDRKDKHHRFSLSGLLNYMDGLWSGSGDEKI IIFTTNHKDRIDPALLRPGRMDMHINLSFLKAKAFRILVSNYLDIQDHDHHPLFDQIEELLEKIEVTPAVVAEQLIRHED PNIALDELLKFLQEMEMQMEAEKPAINNT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 335 | 334 | 9.1E-142 | – | |
| PANTHER | 2 | 335 | 334 | 9.1E-142 | – | |
| SUPERFAMILY | 48 | 335 | 288 | 2.9E-49 | ||
| Gene3D | 85 | 269 | 185 | 2.3E-46 | – | |
| SMART | 132 | 271 | 140 | 8.2E-4 | ||
| CDD | 133 | 268 | 136 | 6.25137E-11 | – | |
| Pfam | 137 | 267 | 131 | 1.1E-18 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
Expression pattern of LotjaGi6g1v0253400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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