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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0339200 |
| Transcript ID | LotjaGi6g1v0339200.1 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | External alternative nad(P)h-ubiquinone oxidoreductase b2, mitochondrial; TAIR: AT4G05020.1 NAD(P)H dehydrogenase B2; Swiss-Prot: sp|Q94BV7|NDB2_ARATH External alternative NAD(P)H-ubiquinone oxidoreductase B2, mitochondrial; TrEMBL-Plants: tr|A0A151T7I0|A0A151T7I0_CAJCA Putative NADH dehydrogenase; Found in the gene: LotjaGi6g1v0339200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:65329825..65335259) extracted from Lotus japonicus Gifu genome v1.2.
AAAAATAATAACAAAGCGCACTGCACCACGTTCCCATTTTCATACGTAAAGCGCCGTAAACCCTCTTTCTCCCTCTTTTC TTCTCCACAAATACTGGAACAAGAATCGATTCTCCACACGCATTTTCGCTTTCACAATGTCCAGTTCCGCTTTCTTCAAC CGTTTTTCCACTGCTCTCCGTGACAACTACTCGCATCTCAGACTCGTTTTGCTCTGCACCACCGTAAGGTATCGTTATAC TACACCAACAATCTCATCACATTTTTTTTTTCTTCATCTTGTCTGCTTTCTGTCGCGCTTCCGCTTTGTGTATCAATAAT TTGGTGTAAAGTGAAAGATACACAAAGCGCGAGCGCGACAGAAAGCAGAGAACATAAATTTCAATTTTCAAATTATATTT TATTTTAGTAGTAATTTTAACTGTAGATCTGTTGTTATATGATGTTAATTTCATCATCTTCTCTGCTTCCTGTTGCGGTT ACGTTTTGTTTATCTTTCACTCTACACCAAATTTCACTGTTTTTTATAGATCCATGCACTTGCAATGAACATGATAATTT CAATTTTCAAGTTATATTTATTTCAGTTTTCACAGTTTTTGCATTGTTTAACTGTAGATCTGTTGTTTATGATGTTAATT TGATTTGATGCGTGCAGTGGTGGTGGTCTTTTGGCTTATGGCGCGATTGCTCCATCGGAAGCGGCGGTTACAGAGAGGAA GAAGGTGGTGGTGCTGGGAACTGGCTGGGCGGGTACAAGTTTTTTGAAGAATCTGAATAATCAGAAATATGAGGTTCAGG TTTTGTCGCCGCGTAACTATTTTGCTTTCACTCCTTTGCTGCCTAGCGTGACGTGCGGTACTGTTGAAGCCCGCAGCATT GTTGAACCCATTCGCAATATTTGCAGGAAGGTTAGGATATTATTGTGTTCATCAAATATTGCATCACGATTTGTTACCTT TTTCCAGTTTCAATTTTTGTTTCAAATCAAATCAATAAATTGATTGATAAAATGAAAATAGTCTATAATATATTTTGGAA GCAAATTTTACTTATACTATGCTATTAAATTTACTTTTTATGCTTAAATTTTAACCTCAATTTGATTTAGTTCATGATTG AGTGGTTAAGATGTACTTCTTTACTCTCTTATAAAAATACCATTATAAAATAACAAATCATGAACTTAACAACTCAACAA AAAAAAAATAAAAAGAGTAAAATGTCGATACATGGTTGTAAATTTTGTTTTCTACCAAATCATAAATTTATAGTATTTAC TATTTAGTTTAATTAAAATTAAAAATGAATGTAACAGTTCAAAATTAAAATGAAACAATAAGTTTAATCAAAGTAGTGTC CTAACATAGTAGTAAACAACATTAGTTATTCTAGTATTTTTTTTGAAATGACATGTTGGTTAATTTATTTTAAATCTATC TCCCAAAGTATAATTAACCAACCTGAAAATGAATTGTTTCAACCAAATGTATTAAAAAAATTGTCTTTACATATTTAGGC ATAAAGAAAAATCAATATCTTGTGAATATTACTCTTGAAACCTTACTTTAGGAATTGAATTCAATTCAATTGGTAAAAAT AGTACTTTTGCACTTACATTTACCAAGAAAGTGAAGGAGGAGGAAGTGTGATCTGGGAATAGGTTGAATTTAGATGATAG AGTAAAATTGTTACAACTAAAAACTTTAATCGGAAACAATTATATTTCATATTAACAGTTATCAATTTCAAGCAGTCCAT CTATGAAGTTAGTCAAAATTACTAATCAGTTAATCACAAGCTATGCGGTTGGCCAACTTTTCTCTGCTCATAACTTCTTC TTTTGTTAGAGAAAATGTAAATGGTATCTAAGATAACTAACTGCATTTGCATTGAAACTTGTCTGGACGCATTATTTGGT TGTGAAACTTGTCTTCACTATAGTACATAGGATACAATATGTTTATGTTATCTATACTTACTACATTGTAGCTTATCATT AGCACGAAACAAAATGTTGGCACGATCACAAATTGTTGTTAGGATATGCAGTTTCTGATTATTAGATTACCAGTGAAGCA ATTTGCTCTGTTTACTAGTGGTACACTAGATTCTGGTGATTATGGTTGTAATTAGTTCCTCTTTCCTTTTTTTAACCTGA GCAGAAAAAGGTGGATGTACAATTCAATGAAGCAGAATGTGTCAAGATTGATGCCGAAAATAAGAAAGTTTATTGTCGAT CTAACACGAACAATAATTTGAATGGGACAGAAGAATTCGCTGTGGATTATGACTACCTAATTATCGCTGTGGGCGCCAAT GTCAATACATTTAATACTCCAGGAGTGGTGGAGAATTGCCATTTTTTGAAGGTAACAATATTCATCTTGCCATTACTTTT CAGTATTTGTTTTGATGCAGAGCATTTAAGAAAAACATCATTCAGTAAATGATATAGTCAGGGTATGTGAGGAAGTGATC AAACCCATTGTTGTTATTATGGGGGTGATGGTGTTCAATGGATCCTGTTTATGCTTGTATGCATACTTGTGGTTTTTAAT TATCTCCTGGACATGCATTTGTAGGAAGTTGAAGATGCTCAGAAGATTAGAAGAACAGTTATCGACTGCTTTGAGAGAGC GAATTTGCCCGATTTAAGTGAAGAAGAGAAAAAGAGAATTCTTCATTTTGCTATCGTTGGAGGTGGGCCAACTGGAGTGG AATTTGCAGCCTCACTTCATGACTTTGTCAATGATGATTTGGTCCGTTTATATCCTGGGATAAAAGATTTAGTTAAAATT ACACTTCTGGAGGCCGGAGATCATATCTTGGGCATGTAAGTACATGAAACATAAATCAGTTCTTTTGCTTCTTATTATTA AGAACTTGTTGCAGTGATATCCGGACATATAGTTTCCTGTGTTTGTGACTACACATTATAAAGAACTCTATGTTCGAGTC TGCTGTATTTAGTTTGTCTAACTTGTTGTGTTCTCTGGCTGTTTTCATAGGTTTGACAAAAGAATCACTGCTTTTGCCGA AGACAAGTTTCAAAGAGATGGGATTGATGTGAAAACAGGATCCATGGTTGTGAAGGTTTCTGAAAAAGAAATTCACACTA AAGAACTGAAAAAGGGAGGAGAGATTACTGCAATTCCATATGGAATGGCTGTCTGGTCAACTGGTATTGGTACTCGTCCA TTTATTAAAGATTTTATGAAACAGATTGGTCAGGTATGTTATTGAGGAATTAGACATTATATCTGTGCTGATTCGTAAAT TCCATAGTATGTTTCTCTTGTAGTTTGTATCTATTCTTCAGTGAATAAAATTTACATTAATTTGTTATTCACTCAACATT ATCTCTTCTAAACAGGCTAGCAGGCGTGCTCTAGCTACTGATGAATGGTTGAGAGTTGAGGGATGCAACAGTGTGTATGC TCTTGGTGATTGTGCTACCATAAACCAGCGAAAAGTCATGGTATCTAACCCAACATTTGCATCATATATTTAATCAACTT GCTTGGTAATAAACACACATGGACATATGTGACATTATTATCCATAGACATTAATGTCTATAGTGTATTGTTTCATCTTT GATTTTTCAGTTCCTTTGTTCAGTTTATCATAACTTTGATGGAACAGAAAAATCTCAACCGATGCCTGAAACTTCAAACA ATGCACATTTGCTTAATTGACAATCTAGGCTCTATTGATTCACATCTATCTCAATTGGTTTCTCTTTTCCCCTGTTAATT GTGAATTGGTTTGGCATTTTAGGAAGATATTACTGCAATCTTTAAGAAGGCTGACAAAAAGAGCACCGGAACACTCACGG TCAAAGAATTTCAAGAGGTCATGGATGACATCTGTGAAAGATACCCTCAGGTGGAGCTATATCTGAAGAGTAAACATATG CGGAACATTGCTGATTTACTGAAGGAAGCCAAGGGCGATGATAAGAAAGAATCAGTTCAACTGAATATCGAGGAACTCAA AACAGCACTCTCCAAAGTGGATTCTCAGATGAAATTCCTTCCTGCTACAGCACAGGTGCATGTCATGATATTTGCATTGT GGTATTCCTTCAAGCAGTATTTATACATGATGCATGTTTCTCAGTGTTATGATATGACAATGATTTTCTGAAAATCCATA TATCAGGTTGCATCTCAGCAAGGCACTTACCTGGCCAAGTGTTTTAACCGGATGGATGATTGTGAAAAGAATCCGGAGGG TCCTCTACGGTTCAGGGCAGAAGGTCGCCATCGCTTCAAGCCCTTCAGGTCCTTACTCAGAAGCTCTCACCTATTGTCCA ATTCTATCTACTACAATACATTTTGATACATATTTCAAGGTTTTCTCATTAGTTTGCCAATGTTTACTCATTATTGATCT GTTGTTTGCTCCTCAAGGTACAAGCACTTGGGTCAATTCGCTCCTTTGGGAGGAGAGCAGACAGCTGCCCAGCTTCCTGG GGATTGGGTTTCAATTGGTCACAGCAGTCAATGGCTGTGGTATTCTGTTTATGCAAGGTATTGTGTTCCTTTTCGCATTT GCGTAGCACTTAATGATTTTAAAATGTCATATCGTTGTTAATCACTAAAATGTTATTCTTTGTGATTTTGTATTCATAAT TATGAGCATGTTACCAAGTTTCATTCAATCCTTTTGAGCAGCAAGCAAGTAAGCTGGCGTACAAGGGCATTGGTAGTTAC AGACTGGACAAGGCGTTTTATTTTTGGGAGGGACTCAAGTCGCATATGAGGAAATTCAACATTTTCAGAGCGAGTCTTGC ATTGGCAAAAAAGCAGAGCTCATTAGTCTAGAATTATTTGTTTCACGAATTCTTTGAGTAAAGTACACAAGCAGACTCTG AGCTGATTGAGCTGCCACAGCCGACTTCTTTTTCATGCTTGCCATTTTCAACTCATGAATTGGGTTTTTTTCCTGCTTCT GATATTAGGTCTCCAAATTTTGCCGATTTTGTTTTTGAGATGCAAGTTATGTTAGCTTCTTAACCCAATTATTCATGTTA TAATTAATCTCTTGTTATTTGTCCAATCTGGTCAGGATTAACATCATCATTAAAATATCATATTTACTCATCAAATTGAT ATTGATCTATTCTTTAATTCCTAGATAACCATCTTCTGTAATAGTAGTGAAATGATTGGAATATATCGTTCTTATTATGC AGAAGATATGAAGCAATCTCTAATACACTATTATTATTTCATTATTTGTGATATTGGTTAGGAGCGTTTTGCCTTGCCTC TTCTTAGAGTTGATGAATGAATAAAATATACTGTTTTATATCAACATTTCTCTTCAAAGCCAAGCTATATTCAGGCTTTG CTGTTTTCTTGAATTTCACTTCTTGCCTACTCAAAGCTAGCAATACATTGCACTGCATTGCTTTTGCATACTCTG
CDS sequence (LotjaGi6g1v0339200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCCAGTTCCGCTTTCTTCAACCGTTTTTCCACTGCTCTCCGTGACAACTACTCGCATCTCAGACTCGTTTTGCTCTG CACCACCGTAAGTGGTGGTGGTCTTTTGGCTTATGGCGCGATTGCTCCATCGGAAGCGGCGGTTACAGAGAGGAAGAAGG TGGTGGTGCTGGGAACTGGCTGGGCGGGTACAAGTTTTTTGAAGAATCTGAATAATCAGAAATATGAGGTTCAGGTTTTG TCGCCGCGTAACTATTTTGCTTTCACTCCTTTGCTGCCTAGCGTGACGTGCGGTACTGTTGAAGCCCGCAGCATTGTTGA ACCCATTCGCAATATTTGCAGGAAGAAAAAGGTGGATGTACAATTCAATGAAGCAGAATGTGTCAAGATTGATGCCGAAA ATAAGAAAGTTTATTGTCGATCTAACACGAACAATAATTTGAATGGGACAGAAGAATTCGCTGTGGATTATGACTACCTA ATTATCGCTGTGGGCGCCAATGTCAATACATTTAATACTCCAGGAGTGGTGGAGAATTGCCATTTTTTGAAGGAAGTTGA AGATGCTCAGAAGATTAGAAGAACAGTTATCGACTGCTTTGAGAGAGCGAATTTGCCCGATTTAAGTGAAGAAGAGAAAA AGAGAATTCTTCATTTTGCTATCGTTGGAGGTGGGCCAACTGGAGTGGAATTTGCAGCCTCACTTCATGACTTTGTCAAT GATGATTTGGTCCGTTTATATCCTGGGATAAAAGATTTAGTTAAAATTACACTTCTGGAGGCCGGAGATCATATCTTGGG CATGTTTGACAAAAGAATCACTGCTTTTGCCGAAGACAAGTTTCAAAGAGATGGGATTGATGTGAAAACAGGATCCATGG TTGTGAAGGTTTCTGAAAAAGAAATTCACACTAAAGAACTGAAAAAGGGAGGAGAGATTACTGCAATTCCATATGGAATG GCTGTCTGGTCAACTGGTATTGGTACTCGTCCATTTATTAAAGATTTTATGAAACAGATTGGTCAGGCTAGCAGGCGTGC TCTAGCTACTGATGAATGGTTGAGAGTTGAGGGATGCAACAGTGTGTATGCTCTTGGTGATTGTGCTACCATAAACCAGC GAAAAGTCATGGAAGATATTACTGCAATCTTTAAGAAGGCTGACAAAAAGAGCACCGGAACACTCACGGTCAAAGAATTT CAAGAGGTCATGGATGACATCTGTGAAAGATACCCTCAGGTGGAGCTATATCTGAAGAGTAAACATATGCGGAACATTGC TGATTTACTGAAGGAAGCCAAGGGCGATGATAAGAAAGAATCAGTTCAACTGAATATCGAGGAACTCAAAACAGCACTCT CCAAAGTGGATTCTCAGATGAAATTCCTTCCTGCTACAGCACAGGTTGCATCTCAGCAAGGCACTTACCTGGCCAAGTGT TTTAACCGGATGGATGATTGTGAAAAGAATCCGGAGGGTCCTCTACGGTTCAGGGCAGAAGGTCGCCATCGCTTCAAGCC CTTCAGGTACAAGCACTTGGGTCAATTCGCTCCTTTGGGAGGAGAGCAGACAGCTGCCCAGCTTCCTGGGGATTGGGTTT CAATTGGTCACAGCAGTCAATGGCTGTGGTATTCTGTTTATGCAAGCAAGCAAGTAAGCTGGCGTACAAGGGCATTGGTA GTTACAGACTGGACAAGGCGTTTTATTTTTGGGAGGGACTCAAGTCGCATATGA
Protein sequence (LotjaGi6g1v0339200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSSAFFNRFSTALRDNYSHLRLVLLCTTVSGGGLLAYGAIAPSEAAVTERKKVVVLGTGWAGTSFLKNLNNQKYEVQVL SPRNYFAFTPLLPSVTCGTVEARSIVEPIRNICRKKKVDVQFNEAECVKIDAENKKVYCRSNTNNNLNGTEEFAVDYDYL IIAVGANVNTFNTPGVVENCHFLKEVEDAQKIRRTVIDCFERANLPDLSEEEKKRILHFAIVGGGPTGVEFAASLHDFVN DDLVRLYPGIKDLVKITLLEAGDHILGMFDKRITAFAEDKFQRDGIDVKTGSMVVKVSEKEIHTKELKKGGEITAIPYGM AVWSTGIGTRPFIKDFMKQIGQASRRALATDEWLRVEGCNSVYALGDCATINQRKVMEDITAIFKKADKKSTGTLTVKEF QEVMDDICERYPQVELYLKSKHMRNIADLLKEAKGDDKKESVQLNIEELKTALSKVDSQMKFLPATAQVASQQGTYLAKC FNRMDDCEKNPEGPLRFRAEGRHRFKPFRYKHLGQFAPLGGEQTAAQLPGDWVSIGHSSQWLWYSVYASKQVSWRTRALV VTDWTRRFIFGRDSSRI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 20 | 20 | - | – | |
| PANTHER | 4 | 577 | 574 | 0.0 | – | |
| PANTHER | 4 | 577 | 574 | 0.0 | – | |
| TMHMM | 21 | 43 | 23 | - | – | |
| Phobius | 21 | 41 | 21 | - | – | |
| Phobius | 42 | 577 | 536 | - | – | |
| Gene3D | 43 | 411 | 369 | 2.0E-139 | – | |
| SUPERFAMILY | 51 | 270 | 220 | 4.66E-28 | ||
| Pfam | 52 | 379 | 328 | 1.6E-59 | ||
| PRINTS | 54 | 73 | 20 | 3.0E-7 | – | |
| PRINTS | 157 | 175 | 19 | 3.0E-7 | – | |
| PRINTS | 218 | 236 | 19 | 3.0E-7 | – | |
| SUPERFAMILY | 218 | 372 | 155 | 1.01E-18 | ||
| SUPERFAMILY | 368 | 464 | 97 | 1.36E-7 | ||
| ProSiteProfiles | 375 | 410 | 36 | 11.752 | ||
| Gene3D | 419 | 577 | 159 | 2.2E-29 | – | |
| Coils | 439 | 459 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi6g1v0339200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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