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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR000719
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 3339 results. Now displaying 4 of 67 with 50 rows per page. This search has taken 5.654s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0162109.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g68400-like [Cicer arietinum] gi|502180487|ref|XP_004516649.1| chr0 76398426 76402109 +
3 domain predictions
3 GO terms
Lj0g3v0165259.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330-like [Cicer arietinum] gi|502178680|ref|XP_004516311.1| chr0 78448107 78448876 +
3 domain predictions
3 GO terms
Lj0g3v0169559.1
n.a. n.a. chr0 80961441 80963816 +
3 domain predictions
3 GO terms
Lj0g3v0170109.1
n.a. Protein kinase-like protein [Medicago truncatula] gi|357491539|ref|XP_003616057.1| chr0 81440462 81442855 -
4 domain predictions
3 GO terms
Lj0g3v0171399.1
n.a. Receptor protein kinase [Medicago truncatula] gi|357474855|ref|XP_003607713.1| chr0 82157478 82160213 +
2 domain predictions
3 GO terms
Lj0g3v0171409.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356514935|ref|XP_003526157.1| chr0 82161320 82169128 -
3 domain predictions
3 GO terms
Lj0g3v0173389.1
n.a. ERECTA [Glycine max] gi|351724175|ref|NP_001235257.1| chr0 83382374 83384990 -
4 domain predictions
3 GO terms
Lj0g3v0173689.1
n.a. PREDICTED: wall-associated receptor kinase 5-like [Glycine max] gi|356551203|ref|XP_003543967.1| chr0 83664577 83665333 +
3 domain predictions
3 GO terms
Lj0g3v0175109.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356514907|ref|XP_003526143.1| chr0 84496026 84497454 -
3 domain predictions
3 GO terms
Lj0g3v0175799.1
n.a. n.a. chr0 84886764 84889305 +
2 domain predictions
3 GO terms
Lj0g3v0176459.1
n.a. Serine/threonine-protein kinase svkA [Triticum urartu] gi|473790098|gb|EMS46331.1| chr0 85239808 85243899 -
3 domain predictions
3 GO terms
Lj0g3v0186229.1
n.a. PREDICTED: casein kinase II subunit alpha-2-like [Glycine max] gi|356511951|ref|XP_003524685.1| chr0 90726690 90728472 +
4 domain predictions
3 GO terms
Lj0g3v0186239.1
n.a. PREDICTED: casein kinase II subunit alpha-1-like [Glycine max] gi|356496963|ref|XP_003517334.1| chr0 90728430 90731696 +
3 domain predictions
3 GO terms
Lj0g3v0188629.1
n.a. PREDICTED: probable receptor-like protein kinase At1g67000-like [Glycine max] gi|356547470|ref|XP_003542135.1| chr0 92195595 92197659 +
2 domain predictions
3 GO terms
Lj0g3v0190409.1
n.a. PREDICTED: probable receptor-like protein kinase At1g49730-like [Cicer arietinum] gi|502083383|ref|XP_004487442.1| chr0 93075482 93077801 +
2 domain predictions
3 GO terms
Lj0g3v0190659.1
n.a. Dual specificity protein kinase pyk2 [Medicago truncatula] gi|357478457|ref|XP_003609514.1| chr0 93208541 93216873 +
3 domain predictions
3 GO terms
Lj0g3v0191879.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 29-like [Glycine max] gi|356575757|ref|XP_003556003.1| chr0 93766675 93770342 -
4 domain predictions
3 GO terms
Lj0g3v0191889.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 25-like [Glycine max] gi|356575773|ref|XP_003556011.1| chr0 93771399 93775451 -
4 domain predictions
3 GO terms
Lj0g3v0192439.1
n.a. PREDICTED: cell division control protein 2 homolog 2-like isoform X1 [Cicer arietinum] gi|502141980|ref|XP_004504733.1| chr0 94081790 94087574 -
4 domain predictions
3 GO terms
Lj0g3v0193259.1
n.a. PREDICTED: lectin-domain containing receptor kinase VI.3-like [Glycine max] gi|356506567|ref|XP_003522051.1| chr0 94452248 94454029 -
4 domain predictions
3 GO terms
Lj0g3v0193779.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Cicer arietinum] gi|502084183|ref|XP_004487641.1| chr0 94600710 94603351 +
3 domain predictions
3 GO terms
Lj0g3v0193869.1
n.a. Serine/threonine protein kinase [Medicago truncatula] gi|357452493|ref|XP_003596523.1| chr0 94633989 94636695 +
3 domain predictions
3 GO terms
Lj0g3v0194239.1
n.a. PREDICTED: probable receptor-like protein kinase At5g39020-like [Cicer arietinum] gi|502124239|ref|XP_004498441.1| chr0 94769869 94770822 +
4 domain predictions
3 GO terms
Lj0g3v0195529.1
n.a. protein kinase family protein [Glycine max] gi|351727579|ref|NP_001235374.1| chr0 95408995 95412342 -
2 domain predictions
3 GO terms
Lj0g3v0195549.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase RPK2-like [Cicer arietinum] gi|502106893|ref|XP_004493090.1| chr0 95421828 95424462 -
4 domain predictions
3 GO terms
Lj0g3v0196229.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g48740-like [Glycine max] gi|356559015|ref|XP_003547797.1| chr0 95686819 95693065 -
4 domain predictions
3 GO terms
Lj0g3v0196349.1
n.a. Ser/Thr protein kinase [Lotus japonicus] gi|62857020|dbj|BAD95895.1| chr0 95734995 95738080 -
4 domain predictions
3 GO terms
Lj0g3v0196419.1
n.a. PREDICTED: receptor-like protein kinase ANXUR2-like [Glycine max] gi|356526520|ref|XP_003531865.1| chr0 95756068 95757031 -
2 domain predictions
3 GO terms
Lj0g3v0196429.1
n.a. serine-threonine kinase [Phaseolus vulgaris] gi|38194928|gb|AAR13316.1| chr0 95758149 95760304 -
3 domain predictions
3 GO terms
Lj0g3v0196439.1
n.a. serine-threonine kinase [Glycine max] gi|351723221|ref|NP_001238551.1| chr0 95758289 95760304 -
4 domain predictions
3 GO terms
Lj0g3v0196449.1
n.a. Receptor-like kinase [Medicago truncatula] gi|357501755|ref|XP_003621166.1| chr0 95785653 95786482 -
2 domain predictions
3 GO terms
Lj0g3v0196549.2
n.a. PREDICTED: serine/threonine-protein kinase Aurora-3 [Vitis vinifera] gi|225453778|ref|XP_002270462.1| chr0 95825635 95826196 -
3 domain predictions
3 GO terms
Lj0g3v0197739.1
n.a. PREDICTED: leucine-rich repeat receptor-like protein kinase PXL2-like [Cicer arietinum] gi|502114811|ref|XP_004495057.1| chr0 96373524 96374342 +
3 domain predictions
3 GO terms
Lj0g3v0200189.1
n.a. PREDICTED: protein kinase PINOID 2-like [Cicer arietinum] gi|502088049|ref|XP_004488713.1| chr0 98716582 98718346 +
4 domain predictions
3 GO terms
Lj0g3v0200839.1
n.a. PREDICTED: serine/threonine-protein kinase Nek2-like [Glycine max] gi|356576692|ref|XP_003556464.1| chr0 99118593 99126931 -
4 domain predictions
3 GO terms
Lj0g3v0201669.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 10-like [Glycine max] gi|356528198|ref|XP_003532692.1| chr0 99754130 99757543 +
4 domain predictions
3 GO terms
Lj0g3v0202489.1
n.a. Serine/threonine-protein kinase/endoribonuclease ire-1 [Triticum urartu] gi|474390985|gb|EMS65329.1| chr0 100210162 100211272 -
3 domain predictions
3 GO terms
Lj0g3v0202739.1
n.a. phosphoenolpyruvate-carboxylase kinase [Glycine max] gi|351725931|ref|NP_001238645.1| chr0 100384118 100384965 -
4 domain predictions
3 GO terms
Lj0g3v0204919.1
n.a. PREDICTED: probable receptor-like protein kinase At1g67000-like isoform X1 [Cicer arietinum] gi|502124182|ref|XP_004498420.1| chr0 101815926 101817781 -
3 domain predictions
3 GO terms
Lj0g3v0204929.1
n.a. PREDICTED: probable receptor-like protein kinase At5g39020-like [Cicer arietinum] gi|502124239|ref|XP_004498441.1| chr0 101818409 101818891 +
4 domain predictions
3 GO terms
Lj0g3v0205339.1
n.a. PREDICTED: wall-associated receptor kinase-like 8-like [Glycine max] gi|356532449|ref|XP_003534785.1| chr0 102118634 102120215 +
3 domain predictions
3 GO terms
Lj0g3v0207289.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g31250-like [Glycine max] gi|356509988|ref|XP_003523723.1| chr0 103515481 103517935 +
3 domain predictions
3 GO terms
Lj0g3v0208709.1
n.a. PREDICTED: serine/threonine-protein kinase AFC2-like [Cicer arietinum] gi|502135581|ref|XP_004502382.1| chr0 104643975 104647665 +
4 domain predictions
3 GO terms
Lj0g3v0208709.2
n.a. PREDICTED: serine/threonine-protein kinase AFC2-like [Cicer arietinum] gi|502135581|ref|XP_004502382.1| chr0 104643975 104647665 +
4 domain predictions
3 GO terms
Lj0g3v0209189.1
n.a. PREDICTED: probable serine/threonine-protein kinase At5g41260-like [Glycine max] gi|356504321|ref|XP_003520945.1| chr0 104817373 104821681 -
3 domain predictions
3 GO terms
Lj0g3v0209189.2
n.a. PREDICTED: probable serine/threonine-protein kinase At5g41260-like [Glycine max] gi|356504321|ref|XP_003520945.1| chr0 104817373 104822812 -
2 domain predictions
3 GO terms
Lj0g3v0209419.1
n.a. Protein kinase-coding resistance protein [Medicago truncatula] gi|357444671|ref|XP_003592613.1| chr0 105003666 105004254 +
4 domain predictions
3 GO terms
Lj0g3v0209839.1
n.a. PREDICTED: probable receptor-like protein kinase At5g39020-like [Cicer arietinum] gi|502124239|ref|XP_004498441.1| chr0 105358496 105359889 +
4 domain predictions
3 GO terms
Lj0g3v0211449.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300-like [Cicer arietinum] gi|502171796|ref|XP_004515104.1| chr0 106530167 106534430 +
4 domain predictions
3 GO terms
Lj0g3v0212229.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Glycine max] gi|356546810|ref|XP_003541815.1| chr0 107062933 107063527 -
2 domain predictions
3 GO terms